; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC02g0603 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC02g0603
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionDNA-directed RNA polymerase III subunit rpc6
Genome locationMC02:4842178..4842891
RNA-Seq ExpressionMC02g0603
SyntenyMC02g0603
Gene Ontology termsGO:0006383 - transcription by RNA polymerase III (biological process)
GO:0005666 - RNA polymerase III complex (cellular component)
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function)
GO:0008168 - methyltransferase activity (molecular function)
InterPro domainsIPR007832 - RNA polymerase Rpc34
IPR016049 - RNA polymerase Rpc34-like
IPR036388 - Winged helix-like DNA-binding domain superfamily
IPR036390 - Winged helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604735.1 DNA-directed RNA polymerase III subunit rpc6, partial [Cucurbita argyrosperma subsp. sororia]1.63e-15389.58Show/hide
Query:  MSRSQGPSSLKRKRPDSSSG--GALIEHEKVLYDLICSKQSMGIWIGDIKRETKYADSIVTKSLKALQAKGMIKLVEHYQNKGKKFYLSKDFEPSKELTG
        MSRSQGPSSLKRKRP+ + G  GALIEHEKVLYDLICSKQSMGIWIGD+KRETKY D++VTKSLKALQ +G+IKLVEHYQNKGKKFYLSKDFEPSKELTG
Subjt:  MSRSQGPSSLKRKRPDSSSG--GALIEHEKVLYDLICSKQSMGIWIGDIKRETKYADSIVTKSLKALQAKGMIKLVEHYQNKGKKFYLSKDFEPSKELTG

Query:  GNWYSEGKLDREYINTLKGFCGRMIQKMKVATIEGIVDSFKKSGASKVDLSREQIQEIVNALVLDNEVMEVKSTGSGEFDFIPIGKICYKCYAKGGVKGE
        GNWYS+GKLDREYI+TLKGFC RMIQKMKVATIEGIVDSFKKSGASKVDLSREQI+EIVNALVLDNEVMEVKSTG+GEFDFIP+GKICYK YAK GVKGE
Subjt:  GNWYSEGKLDREYINTLKGFCGRMIQKMKVATIEGIVDSFKKSGASKVDLSREQIQEIVNALVLDNEVMEVKSTGSGEFDFIPIGKICYKCYAKGGVKGE

Query:  PKTGAMASIPCGVCPRISHCTPNGVISPRTCVYYTKWLDF
        PKTGAMAS PCGVCPRI+HCTPNG+ISPRTCVYYTKWL+F
Subjt:  PKTGAMASIPCGVCPRISHCTPNGVISPRTCVYYTKWLDF

XP_022149571.1 DNA-directed RNA polymerase III subunit rpc6 isoform X1 [Momordica charantia]3.96e-172100Show/hide
Query:  MSRSQGPSSLKRKRPDSSSGGALIEHEKVLYDLICSKQSMGIWIGDIKRETKYADSIVTKSLKALQAKGMIKLVEHYQNKGKKFYLSKDFEPSKELTGGN
        MSRSQGPSSLKRKRPDSSSGGALIEHEKVLYDLICSKQSMGIWIGDIKRETKYADSIVTKSLKALQAKGMIKLVEHYQNKGKKFYLSKDFEPSKELTGGN
Subjt:  MSRSQGPSSLKRKRPDSSSGGALIEHEKVLYDLICSKQSMGIWIGDIKRETKYADSIVTKSLKALQAKGMIKLVEHYQNKGKKFYLSKDFEPSKELTGGN

Query:  WYSEGKLDREYINTLKGFCGRMIQKMKVATIEGIVDSFKKSGASKVDLSREQIQEIVNALVLDNEVMEVKSTGSGEFDFIPIGKICYKCYAKGGVKGEPK
        WYSEGKLDREYINTLKGFCGRMIQKMKVATIEGIVDSFKKSGASKVDLSREQIQEIVNALVLDNEVMEVKSTGSGEFDFIPIGKICYKCYAKGGVKGEPK
Subjt:  WYSEGKLDREYINTLKGFCGRMIQKMKVATIEGIVDSFKKSGASKVDLSREQIQEIVNALVLDNEVMEVKSTGSGEFDFIPIGKICYKCYAKGGVKGEPK

Query:  TGAMASIPCGVCPRISHCTPNGVISPRTCVYYTKWLDF
        TGAMASIPCGVCPRISHCTPNGVISPRTCVYYTKWLDF
Subjt:  TGAMASIPCGVCPRISHCTPNGVISPRTCVYYTKWLDF

XP_022149573.1 DNA-directed RNA polymerase III subunit rpc6 isoform X2 [Momordica charantia]1.27e-143100Show/hide
Query:  MGIWIGDIKRETKYADSIVTKSLKALQAKGMIKLVEHYQNKGKKFYLSKDFEPSKELTGGNWYSEGKLDREYINTLKGFCGRMIQKMKVATIEGIVDSFK
        MGIWIGDIKRETKYADSIVTKSLKALQAKGMIKLVEHYQNKGKKFYLSKDFEPSKELTGGNWYSEGKLDREYINTLKGFCGRMIQKMKVATIEGIVDSFK
Subjt:  MGIWIGDIKRETKYADSIVTKSLKALQAKGMIKLVEHYQNKGKKFYLSKDFEPSKELTGGNWYSEGKLDREYINTLKGFCGRMIQKMKVATIEGIVDSFK

Query:  KSGASKVDLSREQIQEIVNALVLDNEVMEVKSTGSGEFDFIPIGKICYKCYAKGGVKGEPKTGAMASIPCGVCPRISHCTPNGVISPRTCVYYTKWLDF
        KSGASKVDLSREQIQEIVNALVLDNEVMEVKSTGSGEFDFIPIGKICYKCYAKGGVKGEPKTGAMASIPCGVCPRISHCTPNGVISPRTCVYYTKWLDF
Subjt:  KSGASKVDLSREQIQEIVNALVLDNEVMEVKSTGSGEFDFIPIGKICYKCYAKGGVKGEPKTGAMASIPCGVCPRISHCTPNGVISPRTCVYYTKWLDF

XP_022946967.1 DNA-directed RNA polymerase III subunit rpc6 [Cucurbita moschata]6.93e-15589.58Show/hide
Query:  MSRSQGPSSLKRKRPDSSSG--GALIEHEKVLYDLICSKQSMGIWIGDIKRETKYADSIVTKSLKALQAKGMIKLVEHYQNKGKKFYLSKDFEPSKELTG
        MSRSQGPSSLKRKRP+ + G  GALIEHEKVLYDLICSKQSMGIWIGD+KRETKY D++VTKSLKALQ +G+IKLVEHYQNKGKKFYLSKDFEPSKELTG
Subjt:  MSRSQGPSSLKRKRPDSSSG--GALIEHEKVLYDLICSKQSMGIWIGDIKRETKYADSIVTKSLKALQAKGMIKLVEHYQNKGKKFYLSKDFEPSKELTG

Query:  GNWYSEGKLDREYINTLKGFCGRMIQKMKVATIEGIVDSFKKSGASKVDLSREQIQEIVNALVLDNEVMEVKSTGSGEFDFIPIGKICYKCYAKGGVKGE
        GNWYS+GKLDREYI+TLKGFC RMIQKMKVATIEGIVDSFKKSGASKVDLSREQI+EIVNALVLDNEVMEVKSTG+GEFDFIP+GKICYK YAK GVKGE
Subjt:  GNWYSEGKLDREYINTLKGFCGRMIQKMKVATIEGIVDSFKKSGASKVDLSREQIQEIVNALVLDNEVMEVKSTGSGEFDFIPIGKICYKCYAKGGVKGE

Query:  PKTGAMASIPCGVCPRISHCTPNGVISPRTCVYYTKWLDF
        PKTGAMAS PCGVCPRI+HCTPNG+ISPRTCVYYTKWL+F
Subjt:  PKTGAMASIPCGVCPRISHCTPNGVISPRTCVYYTKWLDF

XP_022970903.1 DNA-directed RNA polymerase III subunit rpc6 [Cucurbita maxima]4.88e-15589.58Show/hide
Query:  MSRSQGPSSLKRKRPDSSSG--GALIEHEKVLYDLICSKQSMGIWIGDIKRETKYADSIVTKSLKALQAKGMIKLVEHYQNKGKKFYLSKDFEPSKELTG
        MSRSQGPSSLKRKRP+ + G  GALIEHEKVLYDLICSKQSMGIWIGD+KRETKY D++VTKSLKALQA+G+IKLVEHYQNKGKKFYLSKDFEPSKELTG
Subjt:  MSRSQGPSSLKRKRPDSSSG--GALIEHEKVLYDLICSKQSMGIWIGDIKRETKYADSIVTKSLKALQAKGMIKLVEHYQNKGKKFYLSKDFEPSKELTG

Query:  GNWYSEGKLDREYINTLKGFCGRMIQKMKVATIEGIVDSFKKSGASKVDLSREQIQEIVNALVLDNEVMEVKSTGSGEFDFIPIGKICYKCYAKGGVKGE
        GNWYS+GKLDREYI+TLKGFC RMIQKMKVATIEGIVD+FKKSGASKVDLSREQI+EIVNALVLDNEVMEVKSTG+GEFDFIP+GKICYK YAK GVKGE
Subjt:  GNWYSEGKLDREYINTLKGFCGRMIQKMKVATIEGIVDSFKKSGASKVDLSREQIQEIVNALVLDNEVMEVKSTGSGEFDFIPIGKICYKCYAKGGVKGE

Query:  PKTGAMASIPCGVCPRISHCTPNGVISPRTCVYYTKWLDF
        PKTGAMAS PCGVCPRI+HCTPNG+ISPRTCVYYTKWL+F
Subjt:  PKTGAMASIPCGVCPRISHCTPNGVISPRTCVYYTKWLDF

TrEMBL top hitse value%identityAlignment
A0A1S3AZZ6 DNA-directed RNA polymerase III subunit RPC6-like2.80e-13477.69Show/hide
Query:  MSRSQGPSSLKRKRPD----SSSGGALIEHEKVLYDLICSKQSMGIWIGDIKRETKYADSIVTKSLKALQAKGMIKLVEHYQNKGKKFYLSKDFEPSKEL
        MS+SQGPSSLKRKRPD    +SS GALI  EKVLYDLICSKQSMGI   D+KRETK+A+S+VTKSLK+LQ KG+IK+V+HYQNKGKKFYLS DFEP+KEL
Subjt:  MSRSQGPSSLKRKRPD----SSSGGALIEHEKVLYDLICSKQSMGIWIGDIKRETKYADSIVTKSLKALQAKGMIKLVEHYQNKGKKFYLSKDFEPSKEL

Query:  TGGNWYSEGKLDREYINTLKGFCGRMIQKMKVATIEGIVDSFKKSGASKVDLSREQIQEIVNALVLDNEVMEVKSTGSGEFDFIPIGKICYKCYAKGGVK
        TGGNWY +G+LD++YINTLK  C RMIQ+ K+ TIEGIV+SFK+SGA KV+L+REQI+EIVNALVLDN+V EVKS+G GEF+FIPIGKICYK  ++GG+K
Subjt:  TGGNWYSEGKLDREYINTLKGFCGRMIQKMKVATIEGIVDSFKKSGASKVDLSREQIQEIVNALVLDNEVMEVKSTGSGEFDFIPIGKICYKCYAKGGVK

Query:  GEPKTGAMASIPCGVCPRISHCTPNGVISPRTCVYYTKWLDF
        GEPKTGAMASIPCGVCPRI+HCTPNG+ISP TCVYYTKWLDF
Subjt:  GEPKTGAMASIPCGVCPRISHCTPNGVISPRTCVYYTKWLDF

A0A6J1D758 DNA-directed RNA polymerase III subunit rpc6 isoform X26.15e-144100Show/hide
Query:  MGIWIGDIKRETKYADSIVTKSLKALQAKGMIKLVEHYQNKGKKFYLSKDFEPSKELTGGNWYSEGKLDREYINTLKGFCGRMIQKMKVATIEGIVDSFK
        MGIWIGDIKRETKYADSIVTKSLKALQAKGMIKLVEHYQNKGKKFYLSKDFEPSKELTGGNWYSEGKLDREYINTLKGFCGRMIQKMKVATIEGIVDSFK
Subjt:  MGIWIGDIKRETKYADSIVTKSLKALQAKGMIKLVEHYQNKGKKFYLSKDFEPSKELTGGNWYSEGKLDREYINTLKGFCGRMIQKMKVATIEGIVDSFK

Query:  KSGASKVDLSREQIQEIVNALVLDNEVMEVKSTGSGEFDFIPIGKICYKCYAKGGVKGEPKTGAMASIPCGVCPRISHCTPNGVISPRTCVYYTKWLDF
        KSGASKVDLSREQIQEIVNALVLDNEVMEVKSTGSGEFDFIPIGKICYKCYAKGGVKGEPKTGAMASIPCGVCPRISHCTPNGVISPRTCVYYTKWLDF
Subjt:  KSGASKVDLSREQIQEIVNALVLDNEVMEVKSTGSGEFDFIPIGKICYKCYAKGGVKGEPKTGAMASIPCGVCPRISHCTPNGVISPRTCVYYTKWLDF

A0A6J1D8D1 DNA-directed RNA polymerase III subunit rpc6 isoform X11.92e-172100Show/hide
Query:  MSRSQGPSSLKRKRPDSSSGGALIEHEKVLYDLICSKQSMGIWIGDIKRETKYADSIVTKSLKALQAKGMIKLVEHYQNKGKKFYLSKDFEPSKELTGGN
        MSRSQGPSSLKRKRPDSSSGGALIEHEKVLYDLICSKQSMGIWIGDIKRETKYADSIVTKSLKALQAKGMIKLVEHYQNKGKKFYLSKDFEPSKELTGGN
Subjt:  MSRSQGPSSLKRKRPDSSSGGALIEHEKVLYDLICSKQSMGIWIGDIKRETKYADSIVTKSLKALQAKGMIKLVEHYQNKGKKFYLSKDFEPSKELTGGN

Query:  WYSEGKLDREYINTLKGFCGRMIQKMKVATIEGIVDSFKKSGASKVDLSREQIQEIVNALVLDNEVMEVKSTGSGEFDFIPIGKICYKCYAKGGVKGEPK
        WYSEGKLDREYINTLKGFCGRMIQKMKVATIEGIVDSFKKSGASKVDLSREQIQEIVNALVLDNEVMEVKSTGSGEFDFIPIGKICYKCYAKGGVKGEPK
Subjt:  WYSEGKLDREYINTLKGFCGRMIQKMKVATIEGIVDSFKKSGASKVDLSREQIQEIVNALVLDNEVMEVKSTGSGEFDFIPIGKICYKCYAKGGVKGEPK

Query:  TGAMASIPCGVCPRISHCTPNGVISPRTCVYYTKWLDF
        TGAMASIPCGVCPRISHCTPNGVISPRTCVYYTKWLDF
Subjt:  TGAMASIPCGVCPRISHCTPNGVISPRTCVYYTKWLDF

A0A6J1G553 DNA-directed RNA polymerase III subunit rpc63.35e-15589.58Show/hide
Query:  MSRSQGPSSLKRKRPDSSSG--GALIEHEKVLYDLICSKQSMGIWIGDIKRETKYADSIVTKSLKALQAKGMIKLVEHYQNKGKKFYLSKDFEPSKELTG
        MSRSQGPSSLKRKRP+ + G  GALIEHEKVLYDLICSKQSMGIWIGD+KRETKY D++VTKSLKALQ +G+IKLVEHYQNKGKKFYLSKDFEPSKELTG
Subjt:  MSRSQGPSSLKRKRPDSSSG--GALIEHEKVLYDLICSKQSMGIWIGDIKRETKYADSIVTKSLKALQAKGMIKLVEHYQNKGKKFYLSKDFEPSKELTG

Query:  GNWYSEGKLDREYINTLKGFCGRMIQKMKVATIEGIVDSFKKSGASKVDLSREQIQEIVNALVLDNEVMEVKSTGSGEFDFIPIGKICYKCYAKGGVKGE
        GNWYS+GKLDREYI+TLKGFC RMIQKMKVATIEGIVDSFKKSGASKVDLSREQI+EIVNALVLDNEVMEVKSTG+GEFDFIP+GKICYK YAK GVKGE
Subjt:  GNWYSEGKLDREYINTLKGFCGRMIQKMKVATIEGIVDSFKKSGASKVDLSREQIQEIVNALVLDNEVMEVKSTGSGEFDFIPIGKICYKCYAKGGVKGE

Query:  PKTGAMASIPCGVCPRISHCTPNGVISPRTCVYYTKWLDF
        PKTGAMAS PCGVCPRI+HCTPNG+ISPRTCVYYTKWL+F
Subjt:  PKTGAMASIPCGVCPRISHCTPNGVISPRTCVYYTKWLDF

A0A6J1I599 DNA-directed RNA polymerase III subunit rpc62.36e-15589.58Show/hide
Query:  MSRSQGPSSLKRKRPDSSSG--GALIEHEKVLYDLICSKQSMGIWIGDIKRETKYADSIVTKSLKALQAKGMIKLVEHYQNKGKKFYLSKDFEPSKELTG
        MSRSQGPSSLKRKRP+ + G  GALIEHEKVLYDLICSKQSMGIWIGD+KRETKY D++VTKSLKALQA+G+IKLVEHYQNKGKKFYLSKDFEPSKELTG
Subjt:  MSRSQGPSSLKRKRPDSSSG--GALIEHEKVLYDLICSKQSMGIWIGDIKRETKYADSIVTKSLKALQAKGMIKLVEHYQNKGKKFYLSKDFEPSKELTG

Query:  GNWYSEGKLDREYINTLKGFCGRMIQKMKVATIEGIVDSFKKSGASKVDLSREQIQEIVNALVLDNEVMEVKSTGSGEFDFIPIGKICYKCYAKGGVKGE
        GNWYS+GKLDREYI+TLKGFC RMIQKMKVATIEGIVD+FKKSGASKVDLSREQI+EIVNALVLDNEVMEVKSTG+GEFDFIP+GKICYK YAK GVKGE
Subjt:  GNWYSEGKLDREYINTLKGFCGRMIQKMKVATIEGIVDSFKKSGASKVDLSREQIQEIVNALVLDNEVMEVKSTGSGEFDFIPIGKICYKCYAKGGVKGE

Query:  PKTGAMASIPCGVCPRISHCTPNGVISPRTCVYYTKWLDF
        PKTGAMAS PCGVCPRI+HCTPNG+ISPRTCVYYTKWL+F
Subjt:  PKTGAMASIPCGVCPRISHCTPNGVISPRTCVYYTKWLDF

SwissProt top hitse value%identityAlignment
P91529 Probable DNA-directed RNA polymerase III subunit RPC65.9e-2028.75Show/hide
Query:  QGPSSLKRKRPDSSSGGALIEHEKVLYDLICSKQSMGIWIGDIKRETKYADSIVTKSLKALQAKGMIKLVEHYQNKGKKFYLSKDFEPSKELTGGNWYSE
        Q P  + R + ++S   A  E E+V+Y LI   ++ GIWI +++  +      + K+LK+L+ K +IK ++      +K Y+    EP   LTGG +YS+
Subjt:  QGPSSLKRKRPDSSSGGALIEHEKVLYDLICSKQSMGIWIGDIKRETKYADSIVTKSLKALQAKGMIKLVEHYQNKGKKFYLSKDFEPSKELTGGNWYSE

Query:  GKLDREYINTLKGFCGRMIQKMKVATIEGIVDSFKKSGASKVDLSREQIQEIVNALVLD--------NEVMEVKSTGSGEFDFIPIGKICYKCYAKGGVK
         +LD E INTL   CG      +   I+   ++ +    +     +E  Q I    VL+          ++EV +   G  +    GKI   C  +  + 
Subjt:  GKLDREYINTLKGFCGRMIQKMKVATIEGIVDSFKKSGASKVDLSREQIQEIVNALVLD--------NEVMEVKSTGSGEFDFIPIGKICYKCYAKGGVK

Query:  GEPKTGAMASIPCGVCPRISHCTPNGVISPRTCVYYTKWL
               + S+PC +CP +  C P  VISP++C Y   WL
Subjt:  GEPKTGAMASIPCGVCPRISHCTPNGVISPRTCVYYTKWL

Q2T9S3 DNA-directed RNA polymerase III subunit RPC62.0e-2329.92Show/hide
Query:  DSSSGGAL---IEHEKVLYDLICSKQSMGIWIGDIKRETKYADSIVTKSLKALQAKGMIKLVEHYQNKGKKFYLSKDFEPSKELTGGNWYSEGKLDREYI
        DS + G +      EK++Y +I    + GIW  DI+ ++    + + K LK L++K +IK V+      KK Y+  + +P + +TGG WYS+   + E++
Subjt:  DSSSGGAL---IEHEKVLYDLICSKQSMGIWIGDIKRETKYADSIVTKSLKALQAKGMIKLVEHYQNKGKKFYLSKDFEPSKELTGGNWYSEGKLDREYI

Query:  NTLKGFCGRMIQKMKVATIEGIVD-------SFKKS----------GASKVDLSREQIQEIVNALVLDNEV-MEVKSTGSGEFDFIPIGKICYKCYAKGG
          L   C + +Q       E   +       SF  S          G SKV+LS E I+ I+N L+ D +V M + +   G    +      Y+  +   
Subjt:  NTLKGFCGRMIQKMKVATIEGIVD-------SFKKS----------GASKVDLSREQIQEIVNALVLDNEV-MEVKSTGSGEFDFIPIGKICYKCYAKGG

Query:  VKGEPKTGAMASIPCGVCPRISHCTPNGVISPRTCVYYTKWLDF
            P TG +   PCG+CP    C   G ISP  C+Y T+WL+F
Subjt:  VKGEPKTGAMASIPCGVCPRISHCTPNGVISPRTCVYYTKWLDF

Q86JM3 DNA-directed RNA polymerase III subunit rpc61.4e-2428.81Show/hide
Query:  MSRSQGPSSLKRKRP-DSSSGGALIEHEKVLYDLICSKQSMGIWIGDIKRETKYADSIVTKSLKALQAKGMIKLVEHYQNKGKKFYLSKDFEPSKELTGG
        +  S   +S K   P D +    L   + ++Y LI +  + G W  ++K  + Y    +TK LK L+++ +IK V+  Q+  KK Y+  + EPS+E+TGG
Subjt:  MSRSQGPSSLKRKRP-DSSSGGALIEHEKVLYDLICSKQSMGIWIGDIKRETKYADSIVTKSLKALQAKGMIKLVEHYQNKGKKFYLSKDFEPSKELTGG

Query:  NWYSEGKLDREYINTLKGFCGRMIQKMKVATIEGIVDSFKK--SGASKVDLSREQIQEIVNALVLDNEVMEVKSTGSGEFDFIPIGK---ICYKCYAKGG
          YS+   D +YI  +K      +       +  I+   +K    A+   L  E IQ +VN ++ D ++ E++ T  G      +G+   I YK      
Subjt:  NWYSEGKLDREYINTLKGFCGRMIQKMKVATIEGIVDSFKK--SGASKVDLSREQIQEIVNALVLDNEVMEVKSTGSGEFDFIPIGK---ICYKCYAKGG

Query:  VKGEPKTGAMASIPCGVCPRISHCTPNGVISPRTCVYYTKWLD
         K         ++PCG CP    C+ NG++SP+ CVY+ ++L+
Subjt:  VKGEPKTGAMASIPCGVCPRISHCTPNGVISPRTCVYYTKWLD

Q921X6 DNA-directed RNA polymerase III subunit RPC64.4e-2330.33Show/hide
Query:  DSSSGGAL---IEHEKVLYDLICSKQSMGIWIGDIKRETKYADSIVTKSLKALQAKGMIKLVEHYQNKGKKFYLSKDFEPSKELTGGNWYSEGKLDREYI
        DS + G +      EK++Y +I    + GIW  DI+ ++    + + K LK L++K +IK V+      KK Y+  + +P + +TGG WYS+   + E++
Subjt:  DSSSGGAL---IEHEKVLYDLICSKQSMGIWIGDIKRETKYADSIVTKSLKALQAKGMIKLVEHYQNKGKKFYLSKDFEPSKELTGGNWYSEGKLDREYI

Query:  NTLKGFCGRMIQKMKVATIEGIVD-------SFKKS----------GASKVDLSREQIQEIVNALVLDNEV-MEVKSTGSGEFDFIPIGKICYKCYAKGG
          L   C + +Q       E   +       SF  S          G SKV+LS E I+ I+N L+ D +V M + +   G    +      Y+  A   
Subjt:  NTLKGFCGRMIQKMKVATIEGIVD-------SFKKS----------GASKVDLSREQIQEIVNALVLDNEV-MEVKSTGSGEFDFIPIGKICYKCYAKGG

Query:  VKGEPKTGAMASIPCGVCPRISHCTPNGVISPRTCVYYTKWLDF
        +   P TG + + PCG+CP    C   G ISP  C+Y T+WL+F
Subjt:  VKGEPKTGAMASIPCGVCPRISHCTPNGVISPRTCVYYTKWLDF

Q9H1D9 DNA-directed RNA polymerase III subunit RPC64.4e-2329.92Show/hide
Query:  DSSSGGAL---IEHEKVLYDLICSKQSMGIWIGDIKRETKYADSIVTKSLKALQAKGMIKLVEHYQNKGKKFYLSKDFEPSKELTGGNWYSEGKLDREYI
        DS + G +      EK++Y +I    + GIW  DI+ ++    + + K LK L++K +IK V+      KK Y+  + +P + +TGG WYS+   + E++
Subjt:  DSSSGGAL---IEHEKVLYDLICSKQSMGIWIGDIKRETKYADSIVTKSLKALQAKGMIKLVEHYQNKGKKFYLSKDFEPSKELTGGNWYSEGKLDREYI

Query:  NTLKGFCGRMIQKMKVATIEGIVD-------SFKKS----------GASKVDLSREQIQEIVNALVLDNEV-MEVKSTGSGEFDFIPIGKICYKCYAKGG
          L   C + +Q       E   +       SF  S          G SKV+LS E I+ I+N L+ D +V M + +   G    +      Y+      
Subjt:  NTLKGFCGRMIQKMKVATIEGIVD-------SFKKS----------GASKVDLSREQIQEIVNALVLDNEV-MEVKSTGSGEFDFIPIGKICYKCYAKGG

Query:  VKGEPKTGAMASIPCGVCPRISHCTPNGVISPRTCVYYTKWLDF
            P TG +   PCG+CP    C   G ISP  C+Y T+WL+F
Subjt:  VKGEPKTGAMASIPCGVCPRISHCTPNGVISPRTCVYYTKWLDF

Arabidopsis top hitse value%identityAlignment
AT5G23710.1 DNA binding;DNA-directed RNA polymerases2.4e-5348.71Show/hide
Query:  KRKRPD-SSSGGALIE-HEKVLYDLICSKQSMGIWIGDIKRETKYADSIVTKSLKALQAKGMIKLVEHYQNKGKKFYLSKDFEPSKELTGGNWYSEGKLD
        KRKRPD  SSGG L E HEK L DLI   Q  G  + ++KRE     +IVT+ + +L+ K +IK V +  NKG K YL+ +FEP  ELTGG WY++G LD
Subjt:  KRKRPD-SSSGGALIE-HEKVLYDLICSKQSMGIWIGDIKRETKYADSIVTKSLKALQAKGMIKLVEHYQNKGKKFYLSKDFEPSKELTGGNWYSEGKLD

Query:  REYINTLKGFCGRMIQ--KMKVATIEGIVDSFKKSGASKVDLSREQIQEIVNALVLDNEVMEVKSTGSGEFDFIPIGKICYKCYAKGGVKGEPKTGAMAS
           I  LK  C  +++  + +V T+E +   F K    +  LS +Q +EI+  L+LDN +MEVKS G  EF    IG++CY+   K    GEP+ GA AS
Subjt:  REYINTLKGFCGRMIQ--KMKVATIEGIVDSFKKSGASKVDLSREQIQEIVNALVLDNEVMEVKSTGSGEFDFIPIGKICYKCYAKGGVKGEPKTGAMAS

Query:  IPCGVCPRISHCTPNGVISPRTCVYYTKWLDF
        IPCGVCP I+ C+P+GVISP TCVY+ KWLDF
Subjt:  IPCGVCPRISHCTPNGVISPRTCVYYTKWLDF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCAGATCACAAGGACCTTCATCACTTAAAAGAAAAAGGCCAGACTCAAGCTCTGGAGGAGCTCTGATCGAGCATGAAAAAGTGCTCTATGATCTGATTTGCAGCAA
ACAAAGCATGGGGATTTGGATTGGAGACATTAAAAGAGAAACAAAGTATGCTGACAGTATAGTAACTAAATCACTCAAAGCCCTCCAAGCCAAAGGCATGATAAAACTGG
TTGAACATTATCAGAACAAAGGGAAGAAATTCTACCTGTCGAAAGATTTCGAGCCATCGAAAGAACTAACGGGCGGTAATTGGTATAGCGAGGGGAAGCTCGACAGGGAA
TACATCAATACTCTTAAAGGATTCTGTGGAAGAATGATACAAAAGATGAAGGTGGCTACAATTGAAGGGATTGTGGACTCTTTCAAAAAGAGTGGAGCGTCCAAGGTGGA
CTTGTCTAGAGAGCAAATTCAGGAGATTGTAAATGCTCTGGTTTTGGACAATGAAGTCATGGAGGTGAAGAGCACTGGATCAGGGGAATTTGATTTTATCCCTATTGGGA
AGATCTGTTATAAGTGCTATGCCAAAGGAGGTGTCAAAGGGGAGCCAAAAACGGGGGCCATGGCTTCCATTCCTTGTGGAGTCTGTCCTCGGATTAGTCATTGTACGCCA
AACGGCGTCATTTCGCCTAGAACATGCGTGTACTACACCAAGTGGTTAGATTTT
mRNA sequenceShow/hide mRNA sequence
ATGAGCAGATCACAAGGACCTTCATCACTTAAAAGAAAAAGGCCAGACTCAAGCTCTGGAGGAGCTCTGATCGAGCATGAAAAAGTGCTCTATGATCTGATTTGCAGCAA
ACAAAGCATGGGGATTTGGATTGGAGACATTAAAAGAGAAACAAAGTATGCTGACAGTATAGTAACTAAATCACTCAAAGCCCTCCAAGCCAAAGGCATGATAAAACTGG
TTGAACATTATCAGAACAAAGGGAAGAAATTCTACCTGTCGAAAGATTTCGAGCCATCGAAAGAACTAACGGGCGGTAATTGGTATAGCGAGGGGAAGCTCGACAGGGAA
TACATCAATACTCTTAAAGGATTCTGTGGAAGAATGATACAAAAGATGAAGGTGGCTACAATTGAAGGGATTGTGGACTCTTTCAAAAAGAGTGGAGCGTCCAAGGTGGA
CTTGTCTAGAGAGCAAATTCAGGAGATTGTAAATGCTCTGGTTTTGGACAATGAAGTCATGGAGGTGAAGAGCACTGGATCAGGGGAATTTGATTTTATCCCTATTGGGA
AGATCTGTTATAAGTGCTATGCCAAAGGAGGTGTCAAAGGGGAGCCAAAAACGGGGGCCATGGCTTCCATTCCTTGTGGAGTCTGTCCTCGGATTAGTCATTGTACGCCA
AACGGCGTCATTTCGCCTAGAACATGCGTGTACTACACCAAGTGGTTAGATTTT
Protein sequenceShow/hide protein sequence
MSRSQGPSSLKRKRPDSSSGGALIEHEKVLYDLICSKQSMGIWIGDIKRETKYADSIVTKSLKALQAKGMIKLVEHYQNKGKKFYLSKDFEPSKELTGGNWYSEGKLDRE
YINTLKGFCGRMIQKMKVATIEGIVDSFKKSGASKVDLSREQIQEIVNALVLDNEVMEVKSTGSGEFDFIPIGKICYKCYAKGGVKGEPKTGAMASIPCGVCPRISHCTP
NGVISPRTCVYYTKWLDF