CuGenDBv2

Gene ID	MC02g0761
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	scarecrow-like transcription factor 11 (SCL11)
Genome location	MC02:6039816..6042145
RNA-Seq Expression	MC02g0761
Synteny	MC02g0761
Gene Ontology terms	GO:0000460 - maturation of 5.8S rRNA (biological process)
InterPro domains	IPR019324 - M-phase phosphoprotein 6

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6570693.1 hypothetical protein SDJN03_29608, partial [Cucurbita argyrosperma subsp. sororia]

4.14e-98

82.29

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Query:  MAKRELSNTLRNLKFMQRAAQREEQPNKEEEVKPDESFFPSSSIIKKCVVLVEGDPHPGALKGRMSFQSFNPSIDKLNEEVASLGQQEVPASSSGNHSGN
        MAKRELSNTLRNLKFMQRA QREEQP KEEEVKPDE+FFPSS+II+KCVVLVEGDPHPGA KGRMSFQSFNPSID+LNEEVASLGQ E+P SSSGNHSGN
Subjt:  MAKRELSNTLRNLKFMQRAAQREEQPNKEEEVKPDESFFPSSSIIKKCVVLVEGDPHPGALKGRMSFQSFNPSIDKLNEEVASLGQQEVPASSSGNHSGN

Query:  LSSRENGSSQNEAVCSNIGENDYEANGDLKRKQSEVVPELDGQQQHQTKFQKSVRDNQQPSFNNGKRLFKKPKGGKLDWNVLRPSKTPNKSG
        LSSR+NGSSQNEA CSNI E + EAN DLKRKQSEVV   DG+  H TKF +S RDNQQ SF++GK   KKPKG KLDWNVLRPSKTPNKSG
Subjt:  LSSRENGSSQNEAVCSNIGENDYEANGDLKRKQSEVVPELDGQQQHQTKFQKSVRDNQQPSFNNGKRLFKKPKGGKLDWNVLRPSKTPNKSG

XP_022148303.1 uncharacterized protein LOC111016990 [Momordica charantia]

2.72e-129

100

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Query:  MAKRELSNTLRNLKFMQRAAQREEQPNKEEEVKPDESFFPSSSIIKKCVVLVEGDPHPGALKGRMSFQSFNPSIDKLNEEVASLGQQEVPASSSGNHSGN
        MAKRELSNTLRNLKFMQRAAQREEQPNKEEEVKPDESFFPSSSIIKKCVVLVEGDPHPGALKGRMSFQSFNPSIDKLNEEVASLGQQEVPASSSGNHSGN
Subjt:  MAKRELSNTLRNLKFMQRAAQREEQPNKEEEVKPDESFFPSSSIIKKCVVLVEGDPHPGALKGRMSFQSFNPSIDKLNEEVASLGQQEVPASSSGNHSGN

Query:  LSSRENGSSQNEAVCSNIGENDYEANGDLKRKQSEVVPELDGQQQHQTKFQKSVRDNQQPSFNNGKRLFKKPKGGKLDWNVLRPSKTPNKSG
        LSSRENGSSQNEAVCSNIGENDYEANGDLKRKQSEVVPELDGQQQHQTKFQKSVRDNQQPSFNNGKRLFKKPKGGKLDWNVLRPSKTPNKSG
Subjt:  LSSRENGSSQNEAVCSNIGENDYEANGDLKRKQSEVVPELDGQQQHQTKFQKSVRDNQQPSFNNGKRLFKKPKGGKLDWNVLRPSKTPNKSG

XP_022943952.1 uncharacterized protein LOC111448524 isoform X2 [Cucurbita moschata]

4.82e-97

80.73

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Query:  MAKRELSNTLRNLKFMQRAAQREEQPNKEEEVKPDESFFPSSSIIKKCVVLVEGDPHPGALKGRMSFQSFNPSIDKLNEEVASLGQQEVPASSSGNHSGN
        MAKRELSNTLRNLKFMQRA QRE+QP +EEEVKPDE+FFPSS+II+KCVVLVEGDPHPGA KGRMSFQSFNPSID+LNEE+ASLGQ E+P SSSGNHSGN
Subjt:  MAKRELSNTLRNLKFMQRAAQREEQPNKEEEVKPDESFFPSSSIIKKCVVLVEGDPHPGALKGRMSFQSFNPSIDKLNEEVASLGQQEVPASSSGNHSGN

Query:  LSSRENGSSQNEAVCSNIGENDYEANGDLKRKQSEVVPELDGQQQHQTKFQKSVRDNQQPSFNNGKRLFKKPKGGKLDWNVLRPSKTPNKSG
        LSSR+NGSSQNEA CSNI E + EAN DLKRKQSEVV   DG+  H TKF +S RDNQQ SF++GK   KKPKG KLDWNVLRPSKTPNKSG
Subjt:  LSSRENGSSQNEAVCSNIGENDYEANGDLKRKQSEVVPELDGQQQHQTKFQKSVRDNQQPSFNNGKRLFKKPKGGKLDWNVLRPSKTPNKSG

XP_023512013.1 uncharacterized protein LOC111776852 isoform X2 [Cucurbita pepo subsp. pepo]

2.28e-95

80.73

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Query:  MAKRELSNTLRNLKFMQRAAQREEQPNKEEEVKPDESFFPSSSIIKKCVVLVEGDPHPGALKGRMSFQSFNPSIDKLNEEVASLGQQEVPASSSGNHSGN
        MAKRELSNTLRNLKFMQRA QREEQP KEEEVK DE+FFPSS+II+KCVVLVEG PHPGA KGRMSFQSFNPSID+LNEEVASLGQ E+P SSSGNHSGN
Subjt:  MAKRELSNTLRNLKFMQRAAQREEQPNKEEEVKPDESFFPSSSIIKKCVVLVEGDPHPGALKGRMSFQSFNPSIDKLNEEVASLGQQEVPASSSGNHSGN

Query:  LSSRENGSSQNEAVCSNIGENDYEANGDLKRKQSEVVPELDGQQQHQTKFQKSVRDNQQPSFNNGKRLFKKPKGGKLDWNVLRPSKTPNKSG
        LSSR+NGSSQNE +CSNI E + EAN DLKRKQSEVV   DG+  H TKF +S RDNQQ SF++GK   KKPKG KLDWNVLRPSKTPNKSG
Subjt:  LSSRENGSSQNEAVCSNIGENDYEANGDLKRKQSEVVPELDGQQQHQTKFQKSVRDNQQPSFNNGKRLFKKPKGGKLDWNVLRPSKTPNKSG

XP_023532308.1 uncharacterized protein LOC111794500 isoform X1 [Cucurbita pepo subsp. pepo]

4.61e-95

79.69

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Query:  MAKRELSNTLRNLKFMQRAAQREEQPNKEEEVKPDESFFPSSSIIKKCVVLVEGDPHPGALKGRMSFQSFNPSIDKLNEEVASLGQQEVPASSSGNHSGN
        MAKRE+SNTLRNLKFMQRAAQ+EEQP KEEEVKP+E+ FPSS+II+KCVVLVEGDPHPGAL+GR+SFQSFNPSIDKLNEEVASLGQ+E P SSSGNHS N
Subjt:  MAKRELSNTLRNLKFMQRAAQREEQPNKEEEVKPDESFFPSSSIIKKCVVLVEGDPHPGALKGRMSFQSFNPSIDKLNEEVASLGQQEVPASSSGNHSGN

Query:  LSSRENGSSQNEAVCSNIGENDYEANGDLKRKQSEVVPELDGQQQHQTKFQKSVRDNQQPSFNNGKRLFKKPKGGKLDWNVLRPSKTPNKSG
        +SSRENGSS+NEAV SN  E + E NGDLKRKQSEVV E     +H TKF KS RDNQQ SFNNGK  FKKPKG  LDWNVLRPSKTPNK G
Subjt:  LSSRENGSSQNEAVCSNIGENDYEANGDLKRKQSEVVPELDGQQQHQTKFQKSVRDNQQPSFNNGKRLFKKPKGGKLDWNVLRPSKTPNKSG

TrEMBL top hits

e value

%identity

Alignment

A0A6J1D3R3 uncharacterized protein LOC111016990

1.32e-129

100

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Query:  MAKRELSNTLRNLKFMQRAAQREEQPNKEEEVKPDESFFPSSSIIKKCVVLVEGDPHPGALKGRMSFQSFNPSIDKLNEEVASLGQQEVPASSSGNHSGN
        MAKRELSNTLRNLKFMQRAAQREEQPNKEEEVKPDESFFPSSSIIKKCVVLVEGDPHPGALKGRMSFQSFNPSIDKLNEEVASLGQQEVPASSSGNHSGN
Subjt:  MAKRELSNTLRNLKFMQRAAQREEQPNKEEEVKPDESFFPSSSIIKKCVVLVEGDPHPGALKGRMSFQSFNPSIDKLNEEVASLGQQEVPASSSGNHSGN

Query:  LSSRENGSSQNEAVCSNIGENDYEANGDLKRKQSEVVPELDGQQQHQTKFQKSVRDNQQPSFNNGKRLFKKPKGGKLDWNVLRPSKTPNKSG
        LSSRENGSSQNEAVCSNIGENDYEANGDLKRKQSEVVPELDGQQQHQTKFQKSVRDNQQPSFNNGKRLFKKPKGGKLDWNVLRPSKTPNKSG
Subjt:  LSSRENGSSQNEAVCSNIGENDYEANGDLKRKQSEVVPELDGQQQHQTKFQKSVRDNQQPSFNNGKRLFKKPKGGKLDWNVLRPSKTPNKSG

A0A6J1FT40 uncharacterized protein LOC111448524 isoform X1

1.64e-94

77.89

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Query:  MAKRELSNTLRNLKFMQRAAQREEQPNKEEEVKPDESFFPSSSIIKKCVVLVEGDPHPGALKGRMSFQSFNPSIDKLNEEVASLGQQEVPASSSGNHSGN
        MAKRELSNTLRNLKFMQRA QRE+QP +EEEVKPDE+FFPSS+II+KCVVLVEGDPHPGA KGRMSFQSFNPSID+LNEE+ASLGQ E+P SSSGNHSGN
Subjt:  MAKRELSNTLRNLKFMQRAAQREEQPNKEEEVKPDESFFPSSSIIKKCVVLVEGDPHPGALKGRMSFQSFNPSIDKLNEEVASLGQQEVPASSSGNHSGN

Query:  LSSRE-------NGSSQNEAVCSNIGENDYEANGDLKRKQSEVVPELDGQQQHQTKFQKSVRDNQQPSFNNGKRLFKKPKGGKLDWNVLRPSKTPNKSG
        LSSR+       NGSSQNEA CSNI E + EAN DLKRKQSEVV   DG+  H TKF +S RDNQQ SF++GK   KKPKG KLDWNVLRPSKTPNKSG
Subjt:  LSSRE-------NGSSQNEAVCSNIGENDYEANGDLKRKQSEVVPELDGQQQHQTKFQKSVRDNQQPSFNNGKRLFKKPKGGKLDWNVLRPSKTPNKSG

A0A6J1FUG1 uncharacterized protein LOC111448524 isoform X2

2.34e-97

80.73

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Query:  MAKRELSNTLRNLKFMQRAAQREEQPNKEEEVKPDESFFPSSSIIKKCVVLVEGDPHPGALKGRMSFQSFNPSIDKLNEEVASLGQQEVPASSSGNHSGN
        MAKRELSNTLRNLKFMQRA QRE+QP +EEEVKPDE+FFPSS+II+KCVVLVEGDPHPGA KGRMSFQSFNPSID+LNEE+ASLGQ E+P SSSGNHSGN
Subjt:  MAKRELSNTLRNLKFMQRAAQREEQPNKEEEVKPDESFFPSSSIIKKCVVLVEGDPHPGALKGRMSFQSFNPSIDKLNEEVASLGQQEVPASSSGNHSGN

Query:  LSSRENGSSQNEAVCSNIGENDYEANGDLKRKQSEVVPELDGQQQHQTKFQKSVRDNQQPSFNNGKRLFKKPKGGKLDWNVLRPSKTPNKSG
        LSSR+NGSSQNEA CSNI E + EAN DLKRKQSEVV   DG+  H TKF +S RDNQQ SF++GK   KKPKG KLDWNVLRPSKTPNKSG
Subjt:  LSSRENGSSQNEAVCSNIGENDYEANGDLKRKQSEVVPELDGQQQHQTKFQKSVRDNQQPSFNNGKRLFKKPKGGKLDWNVLRPSKTPNKSG

A0A6J1G7T2 uncharacterized protein LOC111451657

1.29e-94

79.17

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Query:  MAKRELSNTLRNLKFMQRAAQREEQPNKEEEVKPDESFFPSSSIIKKCVVLVEGDPHPGALKGRMSFQSFNPSIDKLNEEVASLGQQEVPASSSGNHSGN
        MAKRE+SNTLRNLKFMQRAAQ+EEQP KEEEVKP+E+ FPSS+II+KCVVLVEGDPHPGAL+GR+SFQSFNPSIDKLNEEVASLGQ+E P  SSGNHS N
Subjt:  MAKRELSNTLRNLKFMQRAAQREEQPNKEEEVKPDESFFPSSSIIKKCVVLVEGDPHPGALKGRMSFQSFNPSIDKLNEEVASLGQQEVPASSSGNHSGN

Query:  LSSRENGSSQNEAVCSNIGENDYEANGDLKRKQSEVVPELDGQQQHQTKFQKSVRDNQQPSFNNGKRLFKKPKGGKLDWNVLRPSKTPNKSG
        +SSRENGSS+NEAV SN  E + E NGDLKRKQSEVV E     +H TKF KS RDNQQ SFNNGK  FKKPKG  LDWNVLRPSKTPNK G
Subjt:  LSSRENGSSQNEAVCSNIGENDYEANGDLKRKQSEVVPELDGQQQHQTKFQKSVRDNQQPSFNNGKRLFKKPKGGKLDWNVLRPSKTPNKSG

A0A6J1L4S0 uncharacterized protein LOC111499887

7.43e-94

79.17

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Query:  MAKRELSNTLRNLKFMQRAAQREEQPNKEEEVKPDESFFPSSSIIKKCVVLVEGDPHPGALKGRMSFQSFNPSIDKLNEEVASLGQQEVPASSSGNHSGN
        MAKRE+SNTLRNLKFMQRAAQ+EEQP KEEEVKP+E+ FPSS+II+KCVVLVEGDPHPGAL+GR+SFQSFNPSIDKLNEEVASLGQ+E   SSSGNHS N
Subjt:  MAKRELSNTLRNLKFMQRAAQREEQPNKEEEVKPDESFFPSSSIIKKCVVLVEGDPHPGALKGRMSFQSFNPSIDKLNEEVASLGQQEVPASSSGNHSGN

Query:  LSSRENGSSQNEAVCSNIGENDYEANGDLKRKQSEVVPELDGQQQHQTKFQKSVRDNQQPSFNNGKRLFKKPKGGKLDWNVLRPSKTPNKSG
        +SSRENGSS+NEAV SN  E + E NGDLKRKQSEVV E     +H TKF KS RDNQQ SFNNGK  FKKPKG  LDWNVLRPSKTPNK G
Subjt:  LSSRENGSSQNEAVCSNIGENDYEANGDLKRKQSEVVPELDGQQQHQTKFQKSVRDNQQPSFNNGKRLFKKPKGGKLDWNVLRPSKTPNKSG

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G59460.1 scarecrow-like transcription factor 11 (SCL11)

1.2e-31

51.31

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Query:  MAKRELSNTLRNLKFMQRAAQREEQPNKEEEVKPDESFFPSSSIIKKCVVLVEGDPHPGALKGRMSFQSFNPSIDKLNEEVASLGQQEVPASSSGNHSGN
        MAKRE+S+TLRNLKFMQR++ + E+   +EE +P+ SF    ++ KKCVV+ + DP PGAL GRMSFQSFNPSI+KL+EE  + G    P+SSS N  G 
Subjt:  MAKRELSNTLRNLKFMQRAAQREEQPNKEEEVKPDESFFPSSSIIKKCVVLVEGDPHPGALKGRMSFQSFNPSIDKLNEEVASLGQQEVPASSSGNHSGN

Query:  LSSRENGSSQNEAVCSNIGENDYEANGDLKRKQSEVVPELDGQQQHQTKFQKSVRDNQQPSFNNGK-RLFKKPKGGKLDWNVLRPSKTPNK
         S  E  SS+ E      GE D    GDLKRKQSEVV E       Q +  KS R   +PS +N K   FKKPK  K+DW+VLRP K   K
Subjt:  LSSRENGSSQNEAVCSNIGENDYEANGDLKRKQSEVVPELDGQQQHQTKFQKSVRDNQQPSFNNGK-RLFKKPKGGKLDWNVLRPSKTPNK

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGCGAAGCGCGAGCTTTCTAATACATTAAGAAACTTAAAGTTCATGCAAAGGGCGGCTCAGAGAGAGGAGCAACCTAACAAAGAAGAAGAAGTAAAACCTGATGAGAG
TTTCTTTCCTTCGAGTTCTATAATCAAAAAGTGTGTGGTTTTAGTTGAAGGAGATCCTCATCCAGGGGCTCTTAAAGGTCGAATGTCTTTTCAAAGCTTTAATCCTTCTA
TTGATAAACTCAATGAAGAAGTAGCTAGCTTAGGTCAGCAAGAAGTTCCCGCCTCTTCATCTGGAAATCACAGTGGAAACCTTTCATCAAGAGAAAATGGTTCTTCACAA
AATGAAGCAGTGTGCTCAAACATTGGTGAAAATGATTACGAGGCTAATGGGGACCTTAAAAGGAAACAATCTGAAGTAGTGCCTGAACTTGATGGACAGCAACAGCATCA
AACTAAATTTCAAAAAAGTGTACGGGACAATCAGCAGCCATCATTTAATAACGGTAAACGATTATTCAAGAAACCAAAGGGTGGAAAGTTGGACTGGAATGTTCTTAGAC
CCTCTAAGACTCCAAATAAGAGCGGATAA

mRNA sequence

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GGGGTATATCTGTAATTTGGTGTCTAACTCGGGGTTGGGTAACCAACAAATTGAACATTGATCCTGGAGGAAACCCTCATTCCCTCCCGCAGAATACAGAGAGTTTCGAG
GTTGTGCGCGCCCGCGAACGCGAAAGGGACACAGAATAGAAATCGGCGGGTGAAGTTCTTGGTTCAAGCTTTCCTCTGTGCTACCTAATATGGCGAAGCGCGAGCTTTCT
AATACATTAAGAAACTTAAAGTTCATGCAAAGGGCGGCTCAGAGAGAGGAGCAACCTAACAAAGAAGAAGAAGTAAAACCTGATGAGAGTTTCTTTCCTTCGAGTTCTAT
AATCAAAAAGTGTGTGGTTTTAGTTGAAGGAGATCCTCATCCAGGGGCTCTTAAAGGTCGAATGTCTTTTCAAAGCTTTAATCCTTCTATTGATAAACTCAATGAAGAAG
TAGCTAGCTTAGGTCAGCAAGAAGTTCCCGCCTCTTCATCTGGAAATCACAGTGGAAACCTTTCATCAAGAGAAAATGGTTCTTCACAAAATGAAGCAGTGTGCTCAAAC
ATTGGTGAAAATGATTACGAGGCTAATGGGGACCTTAAAAGGAAACAATCTGAAGTAGTGCCTGAACTTGATGGACAGCAACAGCATCAAACTAAATTTCAAAAAAGTGT
ACGGGACAATCAGCAGCCATCATTTAATAACGGTAAACGATTATTCAAGAAACCAAAGGGTGGAAAGTTGGACTGGAATGTTCTTAGACCCTCTAAGACTCCAAATAAGA
GCGGATAAGCTTATGTGGGTGAGTCTTTAGACGGGTGGAGAATCCAGTTCCTATGCTCTTAGGAAATTGTCTGGATTTCTTGCCATAATTGCTGGGCATGTAGGACTGTT
TAGAATTGCCTGATCAATTAATTGGAAGTGTCAATTACCACCCCTTCTCTCAAAAAATTAGATGTTACACATCTACCTCATTTGAGTTCCTTAATTCATACGTTCCTGTA
ATCCTGATCAAGAATGAAGGCCAGCACTTGGAGTATTGTCTAATTTCCTAAAAGATTAGATATCTGCAAAATTCAGTTGTATTGCAAATGGAAAAATATAGCGTACAAAT
TATATTTTTTAGTGAGTGACAAGAGTGGAGATTAAGTAATGATGGTATGTTACGAGATGGA

Protein sequence

Show/hide protein sequence

MAKRELSNTLRNLKFMQRAAQREEQPNKEEEVKPDESFFPSSSIIKKCVVLVEGDPHPGALKGRMSFQSFNPSIDKLNEEVASLGQQEVPASSSGNHSGNLSSRENGSSQ
NEAVCSNIGENDYEANGDLKRKQSEVVPELDGQQQHQTKFQKSVRDNQQPSFNNGKRLFKKPKGGKLDWNVLRPSKTPNKSG

MC02g0761 (gene) of Bitter gourd (Dali-11) v1 genome