; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC02g0784 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC02g0784
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationMC02:6224170..6224616
RNA-Seq ExpressionMC02g0784
SyntenyMC02g0784
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7010569.1 putative pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]9.15e-7884.56Show/hide
Query:  RGKQSWKIAFNNAFISGTLKPHHVENVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLVQSSLFWPASSLLQTLLLRGLNPLEIFSNFLESYR
        RGKQ+W+IAFNNA IS  LKPHHVE VL+RT DDSRLALRFFNF+GLHRNFHHSTASFCILIHSLVQ+SLFWPASSLL T+LLRGLNP+EIF N LESY+
Subjt:  RGKQSWKIAFNNAFISGTLKPHHVENVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLVQSSLFWPASSLLQTLLLRGLNPLEIFSNFLESYR

Query:  KYKFSSSSGFDMLIQYYVQNKRAMDGVLVINLMRDHGIWPEVRTLSALL
        +YKFSSSSGFDMLIQYYVQNKR  DGVL+INLMRD+G++PEVRTLSALL
Subjt:  KYKFSSSSGFDMLIQYYVQNKRAMDGVLVINLMRDHGIWPEVRTLSALL

XP_004147277.1 putative pentatricopeptide repeat-containing protein At5g59900 [Cucumis sativus]9.58e-7985.91Show/hide
Query:  RGKQSWKIAFNNAFISGTLKPHHVENVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLVQSSLFWPASSLLQTLLLRGLNPLEIFSNFLESYR
        RG QSWKIAFNN+ ISG ++PHHVE VLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSL+Q++LFWPASSLLQTLLLRGLNP +IF NF ESY+
Subjt:  RGKQSWKIAFNNAFISGTLKPHHVENVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLVQSSLFWPASSLLQTLLLRGLNPLEIFSNFLESYR

Query:  KYKFSSSSGFDMLIQYYVQNKRAMDGVLVINLMRDHGIWPEVRTLSALL
        KYKFSSSSGFDMLIQ+YVQNKR MDGVLV+NLMRD+G+ PEVRTLSALL
Subjt:  KYKFSSSSGFDMLIQYYVQNKRAMDGVLVINLMRDHGIWPEVRTLSALL

XP_022148372.1 putative pentatricopeptide repeat-containing protein At5g59900 isoform X1 [Momordica charantia]2.08e-9198.66Show/hide
Query:  RGKQSWKIAFNNAFISGTLKPHHVENVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLVQSSLFWPASSLLQTLLLRGLNPLEIFSNFLESYR
        RGKQSWKIAF+NAFISGTLKPHHVENVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLVQSSLFWPASSLLQTLLLRGLNPLEIFSNFLESYR
Subjt:  RGKQSWKIAFNNAFISGTLKPHHVENVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLVQSSLFWPASSLLQTLLLRGLNPLEIFSNFLESYR

Query:  KYKFSSSSGFDMLIQYYVQNKRAMDGVLVINLMRDHGIWPEVRTLSALL
        KYKFSSSSGFDMLIQYYVQNKR MDGVLVINLMRDHGIWPEVRTLSALL
Subjt:  KYKFSSSSGFDMLIQYYVQNKRAMDGVLVINLMRDHGIWPEVRTLSALL

XP_022148373.1 putative pentatricopeptide repeat-containing protein At5g59900 isoform X2 [Momordica charantia]1.14e-9198.66Show/hide
Query:  RGKQSWKIAFNNAFISGTLKPHHVENVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLVQSSLFWPASSLLQTLLLRGLNPLEIFSNFLESYR
        RGKQSWKIAF+NAFISGTLKPHHVENVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLVQSSLFWPASSLLQTLLLRGLNPLEIFSNFLESYR
Subjt:  RGKQSWKIAFNNAFISGTLKPHHVENVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLVQSSLFWPASSLLQTLLLRGLNPLEIFSNFLESYR

Query:  KYKFSSSSGFDMLIQYYVQNKRAMDGVLVINLMRDHGIWPEVRTLSALL
        KYKFSSSSGFDMLIQYYVQNKR MDGVLVINLMRDHGIWPEVRTLSALL
Subjt:  KYKFSSSSGFDMLIQYYVQNKRAMDGVLVINLMRDHGIWPEVRTLSALL

XP_022944483.1 putative pentatricopeptide repeat-containing protein At5g59900 isoform X2 [Cucurbita moschata]9.15e-7884.56Show/hide
Query:  RGKQSWKIAFNNAFISGTLKPHHVENVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLVQSSLFWPASSLLQTLLLRGLNPLEIFSNFLESYR
        RGKQ+W+IAFNNA IS  LKPHHVE VL+RT DDSRLALRFFNF+GLHRNFHHSTASFCILIHSLVQ+SLFWPASSLL T+LLRGLNP+EIF N LESY+
Subjt:  RGKQSWKIAFNNAFISGTLKPHHVENVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLVQSSLFWPASSLLQTLLLRGLNPLEIFSNFLESYR

Query:  KYKFSSSSGFDMLIQYYVQNKRAMDGVLVINLMRDHGIWPEVRTLSALL
        +YKFSSSSGFDMLIQYYVQNKR  DGVL+INLMRD+G++PEVRTLSALL
Subjt:  KYKFSSSSGFDMLIQYYVQNKRAMDGVLVINLMRDHGIWPEVRTLSALL

TrEMBL top hitse value%identityAlignment
A0A0A0LVC6 Uncharacterized protein4.64e-7985.91Show/hide
Query:  RGKQSWKIAFNNAFISGTLKPHHVENVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLVQSSLFWPASSLLQTLLLRGLNPLEIFSNFLESYR
        RG QSWKIAFNN+ ISG ++PHHVE VLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSL+Q++LFWPASSLLQTLLLRGLNP +IF NF ESY+
Subjt:  RGKQSWKIAFNNAFISGTLKPHHVENVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLVQSSLFWPASSLLQTLLLRGLNPLEIFSNFLESYR

Query:  KYKFSSSSGFDMLIQYYVQNKRAMDGVLVINLMRDHGIWPEVRTLSALL
        KYKFSSSSGFDMLIQ+YVQNKR MDGVLV+NLMRD+G+ PEVRTLSALL
Subjt:  KYKFSSSSGFDMLIQYYVQNKRAMDGVLVINLMRDHGIWPEVRTLSALL

A0A6J1D3X3 putative pentatricopeptide repeat-containing protein At5g59900 isoform X21.52e-9198.66Show/hide
Query:  RGKQSWKIAFNNAFISGTLKPHHVENVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLVQSSLFWPASSLLQTLLLRGLNPLEIFSNFLESYR
        RGKQSWKIAF+NAFISGTLKPHHVENVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLVQSSLFWPASSLLQTLLLRGLNPLEIFSNFLESYR
Subjt:  RGKQSWKIAFNNAFISGTLKPHHVENVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLVQSSLFWPASSLLQTLLLRGLNPLEIFSNFLESYR

Query:  KYKFSSSSGFDMLIQYYVQNKRAMDGVLVINLMRDHGIWPEVRTLSALL
        KYKFSSSSGFDMLIQYYVQNKR MDGVLVINLMRDHGIWPEVRTLSALL
Subjt:  KYKFSSSSGFDMLIQYYVQNKRAMDGVLVINLMRDHGIWPEVRTLSALL

A0A6J1D4W4 putative pentatricopeptide repeat-containing protein At5g59900 isoform X12.76e-9198.66Show/hide
Query:  RGKQSWKIAFNNAFISGTLKPHHVENVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLVQSSLFWPASSLLQTLLLRGLNPLEIFSNFLESYR
        RGKQSWKIAF+NAFISGTLKPHHVENVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLVQSSLFWPASSLLQTLLLRGLNPLEIFSNFLESYR
Subjt:  RGKQSWKIAFNNAFISGTLKPHHVENVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLVQSSLFWPASSLLQTLLLRGLNPLEIFSNFLESYR

Query:  KYKFSSSSGFDMLIQYYVQNKRAMDGVLVINLMRDHGIWPEVRTLSALL
        KYKFSSSSGFDMLIQYYVQNKR MDGVLVINLMRDHGIWPEVRTLSALL
Subjt:  KYKFSSSSGFDMLIQYYVQNKRAMDGVLVINLMRDHGIWPEVRTLSALL

A0A6J1FVS2 putative pentatricopeptide repeat-containing protein At5g59900 isoform X14.79e-7884.56Show/hide
Query:  RGKQSWKIAFNNAFISGTLKPHHVENVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLVQSSLFWPASSLLQTLLLRGLNPLEIFSNFLESYR
        RGKQ+W+IAFNNA IS  LKPHHVE VL+RT DDSRLALRFFNF+GLHRNFHHSTASFCILIHSLVQ+SLFWPASSLL T+LLRGLNP+EIF N LESY+
Subjt:  RGKQSWKIAFNNAFISGTLKPHHVENVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLVQSSLFWPASSLLQTLLLRGLNPLEIFSNFLESYR

Query:  KYKFSSSSGFDMLIQYYVQNKRAMDGVLVINLMRDHGIWPEVRTLSALL
        +YKFSSSSGFDMLIQYYVQNKR  DGVL+INLMRD+G++PEVRTLSALL
Subjt:  KYKFSSSSGFDMLIQYYVQNKRAMDGVLVINLMRDHGIWPEVRTLSALL

A0A6J1FY36 putative pentatricopeptide repeat-containing protein At5g59900 isoform X24.43e-7884.56Show/hide
Query:  RGKQSWKIAFNNAFISGTLKPHHVENVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLVQSSLFWPASSLLQTLLLRGLNPLEIFSNFLESYR
        RGKQ+W+IAFNNA IS  LKPHHVE VL+RT DDSRLALRFFNF+GLHRNFHHSTASFCILIHSLVQ+SLFWPASSLL T+LLRGLNP+EIF N LESY+
Subjt:  RGKQSWKIAFNNAFISGTLKPHHVENVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLVQSSLFWPASSLLQTLLLRGLNPLEIFSNFLESYR

Query:  KYKFSSSSGFDMLIQYYVQNKRAMDGVLVINLMRDHGIWPEVRTLSALL
        +YKFSSSSGFDMLIQYYVQNKR  DGVL+INLMRD+G++PEVRTLSALL
Subjt:  KYKFSSSSGFDMLIQYYVQNKRAMDGVLVINLMRDHGIWPEVRTLSALL

SwissProt top hitse value%identityAlignment
P0C894 Putative pentatricopeptide repeat-containing protein At2g021504.0e-0626.52Show/hide
Query:  TLKPHHVENVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLVQSSLFWPASSLLQTLLLRGLNPLEIFSNFLESYRKYKFSSSSGFDMLIQYY
        TL P  V  VL+   +D +LA +FF +      F HS  S+CI+ H L  + +++ A+S+L+ ++L   +  ++F + L S R         FD L    
Subjt:  TLKPHHVENVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLVQSSLFWPASSLLQTLLLRGLNPLEIFSNFLESYRKYKFSSSSGFDMLIQYY

Query:  VQNKRAMDGVLVINLMRDHGIWPEVRTLSALL
        +      + +   + M+   ++P+ R+ + LL
Subjt:  VQNKRAMDGVLVINLMRDHGIWPEVRTLSALL

Q9FIX3 Pentatricopeptide repeat-containing protein At5g397101.5e-0525.36Show/hide
Query:  ISGTLKPHHVENVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLVQSSLFWPASSLLQTLLLRGLN---PLEIFSNFLESYRKYKFSSSSGFD
        +S    P    N+L+++ +D  L L+F N+   H+ F  +    CI +H L +  L+  A  L + +  + L+      +F +  E+Y    +S+SS FD
Subjt:  ISGTLKPHHVENVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLVQSSLFWPASSLLQTLLLRGLN---PLEIFSNFLESYRKYKFSSSSGFD

Query:  MLIQYYVQNKRAMDGVLVINLMRDHGIWPEVRTLSALL
        ++++ Y +       + +++L + HG  P V + +A+L
Subjt:  MLIQYYVQNKRAMDGVLVINLMRDHGIWPEVRTLSALL

Q9FJE6 Putative pentatricopeptide repeat-containing protein At5g599008.8e-4662Show/hide
Query:  RGKQSWKIAFNNAFISGTLKPHHVENVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLVQSSLFWPASSLLQTLLLRGLNPLEIFSNFLESYR
        RGK+SW+IA ++  +S  LK  HVE +LI T+DD +L LRFFNFLGLHR F HSTASFCILIH+LV+++LFWPASSLLQTLLLR L P ++F+     Y 
Subjt:  RGKQSWKIAFNNAFISGTLKPHHVENVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLVQSSLFWPASSLLQTLLLRGLNPLEIFSNFLESYR

Query:  KYKFSSSSGFDMLIQYYVQNKRAMDGVLVINLM-RDHGIWPEVRTLSALL
        K K SSSS FD+LIQ+YV+++R +DGVLV  +M     + PEVRTLSALL
Subjt:  KYKFSSSSGFDMLIQYYVQNKRAMDGVLVINLM-RDHGIWPEVRTLSALL

Arabidopsis top hitse value%identityAlignment
AT2G02150.1 Tetratricopeptide repeat (TPR)-like superfamily protein2.8e-0726.52Show/hide
Query:  TLKPHHVENVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLVQSSLFWPASSLLQTLLLRGLNPLEIFSNFLESYRKYKFSSSSGFDMLIQYY
        TL P  V  VL+   +D +LA +FF +      F HS  S+CI+ H L  + +++ A+S+L+ ++L   +  ++F + L S R         FD L    
Subjt:  TLKPHHVENVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLVQSSLFWPASSLLQTLLLRGLNPLEIFSNFLESYRKYKFSSSSGFDMLIQYY

Query:  VQNKRAMDGVLVINLMRDHGIWPEVRTLSALL
        +      + +   + M+   ++P+ R+ + LL
Subjt:  VQNKRAMDGVLVINLMRDHGIWPEVRTLSALL

AT5G39710.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.1e-0625.36Show/hide
Query:  ISGTLKPHHVENVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLVQSSLFWPASSLLQTLLLRGLN---PLEIFSNFLESYRKYKFSSSSGFD
        +S    P    N+L+++ +D  L L+F N+   H+ F  +    CI +H L +  L+  A  L + +  + L+      +F +  E+Y    +S+SS FD
Subjt:  ISGTLKPHHVENVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLVQSSLFWPASSLLQTLLLRGLN---PLEIFSNFLESYRKYKFSSSSGFD

Query:  MLIQYYVQNKRAMDGVLVINLMRDHGIWPEVRTLSALL
        ++++ Y +       + +++L + HG  P V + +A+L
Subjt:  MLIQYYVQNKRAMDGVLVINLMRDHGIWPEVRTLSALL

AT5G59900.1 Pentatricopeptide repeat (PPR) superfamily protein6.2e-4762Show/hide
Query:  RGKQSWKIAFNNAFISGTLKPHHVENVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLVQSSLFWPASSLLQTLLLRGLNPLEIFSNFLESYR
        RGK+SW+IA ++  +S  LK  HVE +LI T+DD +L LRFFNFLGLHR F HSTASFCILIH+LV+++LFWPASSLLQTLLLR L P ++F+     Y 
Subjt:  RGKQSWKIAFNNAFISGTLKPHHVENVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLVQSSLFWPASSLLQTLLLRGLNPLEIFSNFLESYR

Query:  KYKFSSSSGFDMLIQYYVQNKRAMDGVLVINLM-RDHGIWPEVRTLSALL
        K K SSSS FD+LIQ+YV+++R +DGVLV  +M     + PEVRTLSALL
Subjt:  KYKFSSSSGFDMLIQYYVQNKRAMDGVLVINLM-RDHGIWPEVRTLSALL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CGAGGAAAGCAAAGCTGGAAGATCGCCTTCAACAACGCATTCATTTCAGGGACTTTAAAGCCCCATCACGTAGAAAATGTTTTGATTCGAACTCTCGATGACTCCAGGTT
GGCCTTGAGATTCTTCAATTTCTTGGGATTGCATAGGAATTTCCATCACTCCACTGCCTCATTTTGTATTTTAATTCATTCTTTGGTTCAGAGTAGTCTGTTTTGGCCTG
CCTCTTCGCTTTTGCAAACCCTTTTGCTCCGTGGGCTAAACCCACTGGAGATTTTTTCGAATTTTTTGGAATCTTATAGGAAGTACAAATTTTCTTCTAGTTCGGGTTTT
GATATGTTGATTCAGTATTACGTGCAAAACAAGAGGGCAATGGATGGTGTTCTGGTTATAAATCTCATGAGAGACCATGGGATTTGGCCTGAAGTTAGGACTTTAAGTGC
TCTGTTA
mRNA sequenceShow/hide mRNA sequence
CGAGGAAAGCAAAGCTGGAAGATCGCCTTCAACAACGCATTCATTTCAGGGACTTTAAAGCCCCATCACGTAGAAAATGTTTTGATTCGAACTCTCGATGACTCCAGGTT
GGCCTTGAGATTCTTCAATTTCTTGGGATTGCATAGGAATTTCCATCACTCCACTGCCTCATTTTGTATTTTAATTCATTCTTTGGTTCAGAGTAGTCTGTTTTGGCCTG
CCTCTTCGCTTTTGCAAACCCTTTTGCTCCGTGGGCTAAACCCACTGGAGATTTTTTCGAATTTTTTGGAATCTTATAGGAAGTACAAATTTTCTTCTAGTTCGGGTTTT
GATATGTTGATTCAGTATTACGTGCAAAACAAGAGGGCAATGGATGGTGTTCTGGTTATAAATCTCATGAGAGACCATGGGATTTGGCCTGAAGTTAGGACTTTAAGTGC
TCTGTTA
Protein sequenceShow/hide protein sequence
RGKQSWKIAFNNAFISGTLKPHHVENVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLVQSSLFWPASSLLQTLLLRGLNPLEIFSNFLESYRKYKFSSSSGF
DMLIQYYVQNKRAMDGVLVINLMRDHGIWPEVRTLSALL