; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC02g0787 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC02g0787
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionTHO complex subunit 4A-like
Genome locationMC02:6256520..6259608
RNA-Seq ExpressionMC02g0787
SyntenyMC02g0787
Gene Ontology termsGO:0006406 - mRNA export from nucleus (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR025715 - Chromatin target of PRMT1 protein, C-terminal
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004143092.1 THO complex subunit 4A [Cucumis sativus]7.40e-14489.3Show/hide
Query:  MAAPLDMSLDDIIKNNKKSRSGNSRGGRGRPSGPGPVRRFPNRAANRTPYAAPKAPETAWQHDMFIDQTSGFAVQAGRASAIQTGTKLYISNLDYGVSNE
        MAAPLDMSLDDIIKNNKKSRSGNSRG RGR SGPGPVRRFPNRAANRTPY+APKAPET WQHDMF D +SGF VQ GRASAIQTGTKLYISNLDYGVSNE
Subjt:  MAAPLDMSLDDIIKNNKKSRSGNSRGGRGRPSGPGPVRRFPNRAANRTPYAAPKAPETAWQHDMFIDQTSGFAVQAGRASAIQTGTKLYISNLDYGVSNE

Query:  DIKELFSEVGDMKHYSIHYDKSGRSKGTAEVVFSRRVDAVAAVKKYNNVQLDGKPMKIEIVGTNIATPAAVPTAAVAPFENLNGFPRRQQGRGGLPSRQR
        DIKELFSEVGDMK + IHYDKSGRSKGTAEVVFSRR+DAVAAVKKYNNVQLDGKPMKIEIVGTNI+TPA  PTAAV PFEN NG PRRQQGRGG PSRQR
Subjt:  DIKELFSEVGDMKHYSIHYDKSGRSKGTAEVVFSRRVDAVAAVKKYNNVQLDGKPMKIEIVGTNIATPAAVPTAAVAPFENLNGFPRRQQGRGGLPSRQR

Query:  GGGGGGRGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN
             G GFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN
Subjt:  GGGGGGRGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN

XP_008448384.1 PREDICTED: THO complex subunit 4A-like isoform X1 [Cucumis melo]8.63e-14388.89Show/hide
Query:  MAAPLDMSLDDIIKNNKKSRSGNSRGGRGRPSGPGPVRRFPNRAANRTPYAAPKAPETAWQHDMFIDQTSGFAVQAGRASAIQTGTKLYISNLDYGVSNE
        MAAPLDMSLDDIIKNNKKSRSGNSRG RGR SGPGPVRRFPNRAA+RTPY+APKAPET WQHDMF D +SGF  Q GRASAIQTGTKLYISNLDYGVSNE
Subjt:  MAAPLDMSLDDIIKNNKKSRSGNSRGGRGRPSGPGPVRRFPNRAANRTPYAAPKAPETAWQHDMFIDQTSGFAVQAGRASAIQTGTKLYISNLDYGVSNE

Query:  DIKELFSEVGDMKHYSIHYDKSGRSKGTAEVVFSRRVDAVAAVKKYNNVQLDGKPMKIEIVGTNIATPAAVPTAAVAPFENLNGFPRRQQGRGGLPSRQR
        DIKELFSEVGDMK + IHYDKSGRSKGTAEVVFSRR+DAVAAVKKYNNVQLDGKPMKIEIVGTNI+TPA  PTAAV PFEN NG PRRQQGRGG PSRQR
Subjt:  DIKELFSEVGDMKHYSIHYDKSGRSKGTAEVVFSRRVDAVAAVKKYNNVQLDGKPMKIEIVGTNIATPAAVPTAAVAPFENLNGFPRRQQGRGGLPSRQR

Query:  GGGGGGRGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN
             GRGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN
Subjt:  GGGGGGRGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN

XP_022148377.1 THO complex subunit 4A-like [Momordica charantia]7.61e-168100Show/hide
Query:  MAAPLDMSLDDIIKNNKKSRSGNSRGGRGRPSGPGPVRRFPNRAANRTPYAAPKAPETAWQHDMFIDQTSGFAVQAGRASAIQTGTKLYISNLDYGVSNE
        MAAPLDMSLDDIIKNNKKSRSGNSRGGRGRPSGPGPVRRFPNRAANRTPYAAPKAPETAWQHDMFIDQTSGFAVQAGRASAIQTGTKLYISNLDYGVSNE
Subjt:  MAAPLDMSLDDIIKNNKKSRSGNSRGGRGRPSGPGPVRRFPNRAANRTPYAAPKAPETAWQHDMFIDQTSGFAVQAGRASAIQTGTKLYISNLDYGVSNE

Query:  DIKELFSEVGDMKHYSIHYDKSGRSKGTAEVVFSRRVDAVAAVKKYNNVQLDGKPMKIEIVGTNIATPAAVPTAAVAPFENLNGFPRRQQGRGGLPSRQR
        DIKELFSEVGDMKHYSIHYDKSGRSKGTAEVVFSRRVDAVAAVKKYNNVQLDGKPMKIEIVGTNIATPAAVPTAAVAPFENLNGFPRRQQGRGGLPSRQR
Subjt:  DIKELFSEVGDMKHYSIHYDKSGRSKGTAEVVFSRRVDAVAAVKKYNNVQLDGKPMKIEIVGTNIATPAAVPTAAVAPFENLNGFPRRQQGRGGLPSRQR

Query:  GGGGGGRGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN
        GGGGGGRGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN
Subjt:  GGGGGGRGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN

XP_023006955.1 THO complex subunit 4A-like [Cucurbita maxima]7.34e-14288.89Show/hide
Query:  MAAPLDMSLDDIIKNNKKSRSGNSRGGRGRPSGPGPVRRFPNRAANRTPYAAPKAPETAWQHDMFIDQTSGFAVQAGRASAIQTGTKLYISNLDYGVSNE
        MAAPLDMSLDDIIKNNKKSRSG SRG RGR SGPGPVRR PNRAANRTPY+APKAPET WQHDMF+DQ +GF VQAGRAS+IQTGTKLYISNLDYGVSNE
Subjt:  MAAPLDMSLDDIIKNNKKSRSGNSRGGRGRPSGPGPVRRFPNRAANRTPYAAPKAPETAWQHDMFIDQTSGFAVQAGRASAIQTGTKLYISNLDYGVSNE

Query:  DIKELFSEVGDMKHYSIHYDKSGRSKGTAEVVFSRRVDAVAAVKKYNNVQLDGKPMKIEIVGTNIATPAAVPTAAVAPFENLNGFPRRQQGRGGLPSRQR
        DIKELFSEVGDMK Y IHYDKSGRSKGTAEVVFSRR DA AAVKKYNNVQLDGKPMKIEIVGTNIAT A  P AAV PFEN NG PRRQQGRGGLPSRQR
Subjt:  DIKELFSEVGDMKHYSIHYDKSGRSKGTAEVVFSRRVDAVAAVKKYNNVQLDGKPMKIEIVGTNIATPAAVPTAAVAPFENLNGFPRRQQGRGGLPSRQR

Query:  GGGGGGRGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN
            GGRG GRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN
Subjt:  GGGGGGRGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN

XP_038901991.1 THO complex subunit 4A-like [Benincasa hispida]1.56e-14590.53Show/hide
Query:  MAAPLDMSLDDIIKNNKKSRSGNSRGGRGRPSGPGPVRRFPNRAANRTPYAAPKAPETAWQHDMFIDQTSGFAVQAGRASAIQTGTKLYISNLDYGVSNE
        MAAPLDMSLDDIIKNNKKSRSGNSRG RGR SGPGPVRRFPNRAANRTPY+APKAPET WQHDMF D  SGFA Q GRASAIQTGTKLYISNLDYGVSNE
Subjt:  MAAPLDMSLDDIIKNNKKSRSGNSRGGRGRPSGPGPVRRFPNRAANRTPYAAPKAPETAWQHDMFIDQTSGFAVQAGRASAIQTGTKLYISNLDYGVSNE

Query:  DIKELFSEVGDMKHYSIHYDKSGRSKGTAEVVFSRRVDAVAAVKKYNNVQLDGKPMKIEIVGTNIATPAAVPTAAVAPFENLNGFPRRQQGRGGLPSRQR
        DIKELFSEVGDMK Y IHYDKSGRSKGTAEVVFSRR+DAVAAVKKYNNVQLDGKPMKIEIVGTNI+TPA  PTAAV PFENLNG PRRQQGRGG PSRQR
Subjt:  DIKELFSEVGDMKHYSIHYDKSGRSKGTAEVVFSRRVDAVAAVKKYNNVQLDGKPMKIEIVGTNIATPAAVPTAAVAPFENLNGFPRRQQGRGGLPSRQR

Query:  GGGGGGRGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN
             GRGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN
Subjt:  GGGGGGRGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN

TrEMBL top hitse value%identityAlignment
A0A0A0KBU2 RRM domain-containing protein3.58e-14489.3Show/hide
Query:  MAAPLDMSLDDIIKNNKKSRSGNSRGGRGRPSGPGPVRRFPNRAANRTPYAAPKAPETAWQHDMFIDQTSGFAVQAGRASAIQTGTKLYISNLDYGVSNE
        MAAPLDMSLDDIIKNNKKSRSGNSRG RGR SGPGPVRRFPNRAANRTPY+APKAPET WQHDMF D +SGF VQ GRASAIQTGTKLYISNLDYGVSNE
Subjt:  MAAPLDMSLDDIIKNNKKSRSGNSRGGRGRPSGPGPVRRFPNRAANRTPYAAPKAPETAWQHDMFIDQTSGFAVQAGRASAIQTGTKLYISNLDYGVSNE

Query:  DIKELFSEVGDMKHYSIHYDKSGRSKGTAEVVFSRRVDAVAAVKKYNNVQLDGKPMKIEIVGTNIATPAAVPTAAVAPFENLNGFPRRQQGRGGLPSRQR
        DIKELFSEVGDMK + IHYDKSGRSKGTAEVVFSRR+DAVAAVKKYNNVQLDGKPMKIEIVGTNI+TPA  PTAAV PFEN NG PRRQQGRGG PSRQR
Subjt:  DIKELFSEVGDMKHYSIHYDKSGRSKGTAEVVFSRRVDAVAAVKKYNNVQLDGKPMKIEIVGTNIATPAAVPTAAVAPFENLNGFPRRQQGRGGLPSRQR

Query:  GGGGGGRGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN
             G GFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN
Subjt:  GGGGGGRGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN

A0A1S3BK70 THO complex subunit 4A-like isoform X14.18e-14388.89Show/hide
Query:  MAAPLDMSLDDIIKNNKKSRSGNSRGGRGRPSGPGPVRRFPNRAANRTPYAAPKAPETAWQHDMFIDQTSGFAVQAGRASAIQTGTKLYISNLDYGVSNE
        MAAPLDMSLDDIIKNNKKSRSGNSRG RGR SGPGPVRRFPNRAA+RTPY+APKAPET WQHDMF D +SGF  Q GRASAIQTGTKLYISNLDYGVSNE
Subjt:  MAAPLDMSLDDIIKNNKKSRSGNSRGGRGRPSGPGPVRRFPNRAANRTPYAAPKAPETAWQHDMFIDQTSGFAVQAGRASAIQTGTKLYISNLDYGVSNE

Query:  DIKELFSEVGDMKHYSIHYDKSGRSKGTAEVVFSRRVDAVAAVKKYNNVQLDGKPMKIEIVGTNIATPAAVPTAAVAPFENLNGFPRRQQGRGGLPSRQR
        DIKELFSEVGDMK + IHYDKSGRSKGTAEVVFSRR+DAVAAVKKYNNVQLDGKPMKIEIVGTNI+TPA  PTAAV PFEN NG PRRQQGRGG PSRQR
Subjt:  DIKELFSEVGDMKHYSIHYDKSGRSKGTAEVVFSRRVDAVAAVKKYNNVQLDGKPMKIEIVGTNIATPAAVPTAAVAPFENLNGFPRRQQGRGGLPSRQR

Query:  GGGGGGRGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN
             GRGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN
Subjt:  GGGGGGRGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN

A0A6J1D4W8 THO complex subunit 4A-like3.69e-168100Show/hide
Query:  MAAPLDMSLDDIIKNNKKSRSGNSRGGRGRPSGPGPVRRFPNRAANRTPYAAPKAPETAWQHDMFIDQTSGFAVQAGRASAIQTGTKLYISNLDYGVSNE
        MAAPLDMSLDDIIKNNKKSRSGNSRGGRGRPSGPGPVRRFPNRAANRTPYAAPKAPETAWQHDMFIDQTSGFAVQAGRASAIQTGTKLYISNLDYGVSNE
Subjt:  MAAPLDMSLDDIIKNNKKSRSGNSRGGRGRPSGPGPVRRFPNRAANRTPYAAPKAPETAWQHDMFIDQTSGFAVQAGRASAIQTGTKLYISNLDYGVSNE

Query:  DIKELFSEVGDMKHYSIHYDKSGRSKGTAEVVFSRRVDAVAAVKKYNNVQLDGKPMKIEIVGTNIATPAAVPTAAVAPFENLNGFPRRQQGRGGLPSRQR
        DIKELFSEVGDMKHYSIHYDKSGRSKGTAEVVFSRRVDAVAAVKKYNNVQLDGKPMKIEIVGTNIATPAAVPTAAVAPFENLNGFPRRQQGRGGLPSRQR
Subjt:  DIKELFSEVGDMKHYSIHYDKSGRSKGTAEVVFSRRVDAVAAVKKYNNVQLDGKPMKIEIVGTNIATPAAVPTAAVAPFENLNGFPRRQQGRGGLPSRQR

Query:  GGGGGGRGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN
        GGGGGGRGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN
Subjt:  GGGGGGRGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN

A0A6J1G721 THO complex subunit 4A-like5.05e-14288.89Show/hide
Query:  MAAPLDMSLDDIIKNNKKSRSGNSRGGRGRPSGPGPVRRFPNRAANRTPYAAPKAPETAWQHDMFIDQTSGFAVQAGRASAIQTGTKLYISNLDYGVSNE
        MAAPLDMSLDDIIKNNKKSRSG SRG RGR SGPGPVRR PNRAANRTPY+APKAPET WQHDMF+DQ +GF VQAGRAS+IQTGTKLYISNLDYGVSNE
Subjt:  MAAPLDMSLDDIIKNNKKSRSGNSRGGRGRPSGPGPVRRFPNRAANRTPYAAPKAPETAWQHDMFIDQTSGFAVQAGRASAIQTGTKLYISNLDYGVSNE

Query:  DIKELFSEVGDMKHYSIHYDKSGRSKGTAEVVFSRRVDAVAAVKKYNNVQLDGKPMKIEIVGTNIATPAAVPTAAVAPFENLNGFPRRQQGRGGLPSRQR
        DIKELFSEVGDMK Y IHYDKSGRSKGTAEVVFSRR DA AAVKKYNNVQLDGKPMKIEIVGTNIAT A  P AAV PFEN NG PRRQQGRGGLPSRQR
Subjt:  DIKELFSEVGDMKHYSIHYDKSGRSKGTAEVVFSRRVDAVAAVKKYNNVQLDGKPMKIEIVGTNIATPAAVPTAAVAPFENLNGFPRRQQGRGGLPSRQR

Query:  GGGGGGRGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN
            GGRG GRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN
Subjt:  GGGGGGRGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN

A0A6J1L1M6 THO complex subunit 4A-like3.55e-14288.89Show/hide
Query:  MAAPLDMSLDDIIKNNKKSRSGNSRGGRGRPSGPGPVRRFPNRAANRTPYAAPKAPETAWQHDMFIDQTSGFAVQAGRASAIQTGTKLYISNLDYGVSNE
        MAAPLDMSLDDIIKNNKKSRSG SRG RGR SGPGPVRR PNRAANRTPY+APKAPET WQHDMF+DQ +GF VQAGRAS+IQTGTKLYISNLDYGVSNE
Subjt:  MAAPLDMSLDDIIKNNKKSRSGNSRGGRGRPSGPGPVRRFPNRAANRTPYAAPKAPETAWQHDMFIDQTSGFAVQAGRASAIQTGTKLYISNLDYGVSNE

Query:  DIKELFSEVGDMKHYSIHYDKSGRSKGTAEVVFSRRVDAVAAVKKYNNVQLDGKPMKIEIVGTNIATPAAVPTAAVAPFENLNGFPRRQQGRGGLPSRQR
        DIKELFSEVGDMK Y IHYDKSGRSKGTAEVVFSRR DA AAVKKYNNVQLDGKPMKIEIVGTNIAT A  P AAV PFEN NG PRRQQGRGGLPSRQR
Subjt:  DIKELFSEVGDMKHYSIHYDKSGRSKGTAEVVFSRRVDAVAAVKKYNNVQLDGKPMKIEIVGTNIATPAAVPTAAVAPFENLNGFPRRQQGRGGLPSRQR

Query:  GGGGGGRGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN
            GGRG GRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN
Subjt:  GGGGGGRGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN

SwissProt top hitse value%identityAlignment
B5FXN8 THO complex subunit 41.2e-3945.69Show/hide
Query:  MAAPLDMSLDDIIKNNKKSRSGNSRGGRG--------RPSGP------------GPVRRFPNRA----ANR-TPYAAPKAPETAWQHDMFIDQTSGFAVQ
        MA  +DMSLDDIIK N+  R G SRGGRG        R  GP            GPVR  P  A     NR  PY+ PK     WQHD+F    SGF   
Subjt:  MAAPLDMSLDDIIKNNKKSRSGNSRGGRG--------RPSGP------------GPVRRFPNRA----ANR-TPYAAPKAPETAWQHDMFIDQTSGFAVQ

Query:  AGRASAIQTGTKLYISNLDYGVSNEDIKELFSEVGDMKHYSIHYDKSGRSKGTAEVVFSRRVDAVAAVKKYNNVQLDGKPMKIEIVGTNIATPAAVPTAA
        AG    ++TG KL +SNLD+GVS+ DI+ELF+E G +K  ++HYD+SGRS GTA+V F R+ DA+ A+K+YN V LDG+PM I++V + I T    P  +
Subjt:  AGRASAIQTGTKLYISNLDYGVSNEDIKELFSEVGDMKHYSIHYDKSGRSKGTAEVVFSRRVDAVAAVKKYNNVQLDGKPMKIEIVGTNIATPAAVPTAA

Query:  VAPFENLNGFPRRQQGRGGLPSRQRGGGGGGRGF-----GRGRGRGRGPSEKVSAEDLDADLEKYHA
        V    N  G  R +   GG      GGGG  RG      GRGRG GR   +++SAE+LDA L+ Y+A
Subjt:  VAPFENLNGFPRRQQGRGGLPSRQRGGGGGGRGF-----GRGRGRGRGPSEKVSAEDLDADLEKYHA

Q6NQ72 THO complex subunit 4D3.3e-4243.15Show/hide
Query:  MAAPLDMSLDDIIKNNKKSRSGN---SRG-GRGRPS---GPGPVRRFPNRAANRTPYA------APKAPETAWQHDMFIDQTSGFAVQAGRASAIQTGTK
        M+  L+M+LD+I+K  K +RSG    SRG GRGR     G GP RR P  A N  P +        +     WQ  +F D      ++A  AS ++ GT+
Subjt:  MAAPLDMSLDDIIKNNKKSRSGN---SRG-GRGRPS---GPGPVRRFPNRAANRTPYA------APKAPETAWQHDMFIDQTSGFAVQAGRASAIQTGTK

Query:  LYISNLDYGVSNEDIKELFSEVGDMKHYSIHYDKSGRSKGTAEVVFSRRVDAVAAVKKYNNVQLDGKPMKIEIVGTNIATPAAVPTAAVAPFENLNGFPR
        L+++NLD GV+NEDI+ELFSE+G+++ Y+IHYDK+GR  GTAEVV+ RR DA  A+KKYNNV LDG+PM++EI+G N ++ A +          LNG  +
Subjt:  LYISNLDYGVSNEDIKELFSEVGDMKHYSIHYDKSGRSKGTAEVVFSRRVDAVAAVKKYNNVQLDGKPMKIEIVGTNIATPAAVPTAAVAPFENLNGFPR

Query:  R----QQGRGG--------------------LP---------------SRQRGGGGGGRGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESM
        R    QQG GG                    LP                R RG G GGRG G GRG G+ P EK SA DLD DLE YHA++M
Subjt:  R----QQGRGG--------------------LP---------------SRQRGGGGGGRGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESM

Q8L719 THO complex subunit 4B1.9e-6155.67Show/hide
Query:  MAAPLDMSLDDIIKNNKK---SR------SGNSRGGR-GRPSGPGPVRRFPNRAANRT-PYAAP----KAPETAWQHDMFIDQTSGFA-------VQAGR
        M+  LDMSLDDIIK+N+K   SR       GN+ GGR G  S  GP RRF NR   RT PY+ P    +A +  WQ+D+F    S  A          G 
Subjt:  MAAPLDMSLDDIIKNNKK---SR------SGNSRGGR-GRPSGPGPVRRFPNRAANRT-PYAAP----KAPETAWQHDMFIDQTSGFA-------VQAGR

Query:  ASAIQTGTKLYISNLDYGVSNEDIKELFSEVGDMKHYSIHYDKSGRSKGTAEVVFSRRVDAVAAVKKYNNVQLDGKPMKIEIVGTNIATPAAVPTAAVA-
         S+I+TGTKLYISNLDYGVSNEDIKELFSEVGD+K Y IHYD+SGRSKGTAEVVFSRR DA+AAVK+YNNVQLDGK MKIEIVGTN++ P A+P  A A 
Subjt:  ASAIQTGTKLYISNLDYGVSNEDIKELFSEVGDMKHYSIHYDKSGRSKGTAEVVFSRRVDAVAAVKKYNNVQLDGKPMKIEIVGTNIATPAAVPTAAVA-

Query:  -PF----------ENLNGFPR-------RQQGRGGLPSRQRGGGGGGRGFGRGRGR---------GRGPSEKVSAEDLDADLEKYHAESMQ
         PF          EN NG          R +GRGG   R RGGG GG  F  GRG          GRG  E VSAEDLDA+L+KYH E+M+
Subjt:  -PF----------ENLNGFPR-------RQQGRGGLPSRQRGGGGGGRGFGRGRGR---------GRGPSEKVSAEDLDADLEKYHAESMQ

Q8L773 THO complex subunit 4A3.5e-6863.75Show/hide
Query:  MAAPLDMSLDDIIKNNKKSRSG-NSRGGRGRPSGPGPVRR-FPNRAANRT-PYAAPKAPETAWQHDMFIDQTSGFAVQAGRASA-IQTGTKLYISNLDYG
        M+  LDMSLDD+I  N+KSR G     G G  SGPGP RR  PNR + R+ PY + KAPE+ W HDMF D++     ++GR+SA I+TGTKLYISNLDYG
Subjt:  MAAPLDMSLDDIIKNNKKSRSG-NSRGGRGRPSGPGPVRR-FPNRAANRT-PYAAPKAPETAWQHDMFIDQTSGFAVQAGRASA-IQTGTKLYISNLDYG

Query:  VSNEDIKELFSEVGDMKHYSIHYDKSGRSKGTAEVVFSRRVDAVAAVKKYNNVQLDGKPMKIEIVGTNIATPAAVPTAAVAPFENLNGFP-RRQQGRGGL
        V NEDIKELF+EVG++K Y++H+D+SGRSKGTAEVV+SRR DA+AAVKKYN+VQLDGKPMKIEIVGTN+ T AA P+   A   N NG P R  QGRGG 
Subjt:  VSNEDIKELFSEVGDMKHYSIHYDKSGRSKGTAEVVFSRRVDAVAAVKKYNNVQLDGKPMKIEIVGTNIATPAAVPTAAVAPFENLNGFP-RRQQGRGGL

Query:  PSRQRGG--GGGGR-GFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN
          +QRGG  GGGGR G GRGR  G+GP+EK+SAEDLDADL+KYH+  M+ N
Subjt:  PSRQRGG--GGGGR-GFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN

Q94EH8 THO complex subunit 4C3.4e-3940.59Show/hide
Query:  MAAPLDMSLDDIIKNNKKSRSGNSRG-----------GRGRPS-------GPGPVRRFPNRAANRTPYA-------APKAPETAWQHDMFIDQTSGFAVQ
        M+  L+M+LD+I+K +K  RS  +R            GRG P+       G GPVRR P  A N  P +       A +     WQ+   + + +   ++
Subjt:  MAAPLDMSLDDIIKNNKKSRSGNSRG-----------GRGRPS-------GPGPVRRFPNRAANRTPYA-------APKAPETAWQHDMFIDQTSGFAVQ

Query:  AGRASAIQTGTKLYISNLDYGVSNEDIKELFSEVGDMKHYSIHYDKSGRSKGTAEVVFSRRVDAVAAVKKYNNVQLDGKPMKIEIVGTNIATPAAVPTAA
        A   S ++ GT +YI+NLD GV+NEDI+EL++E+G++K Y+IHYDK+GR  G+AEVV+ RR DA+ A++KYNNV LDG+PMK+EI+G N     + P AA
Subjt:  AGRASAIQTGTKLYISNLDYGVSNEDIKELFSEVGDMKHYSIHYDKSGRSKGTAEVVFSRRVDAVAAVKKYNNVQLDGKPMKIEIVGTNIATPAAVPTAA

Query:  VAPFENLNGFPRRQ-------------QGRGGLPSRQR------------GGGGGGRGFGRGRGRGRG----------PSEKVSAEDLDADLEKYHAESM
              LNG  +R              +GRG  PS +R             G GG RG GRG G GRG          P EK SA DLD DLE YHAE+M
Subjt:  VAPFENLNGFPRRQ-------------QGRGGLPSRQR------------GGGGGGRGFGRGRGRGRG----------PSEKVSAEDLDADLEKYHAESM

Query:  QIN
         I+
Subjt:  QIN

Arabidopsis top hitse value%identityAlignment
AT5G02530.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.3e-6255.67Show/hide
Query:  MAAPLDMSLDDIIKNNKK---SR------SGNSRGGR-GRPSGPGPVRRFPNRAANRT-PYAAP----KAPETAWQHDMFIDQTSGFA-------VQAGR
        M+  LDMSLDDIIK+N+K   SR       GN+ GGR G  S  GP RRF NR   RT PY+ P    +A +  WQ+D+F    S  A          G 
Subjt:  MAAPLDMSLDDIIKNNKK---SR------SGNSRGGR-GRPSGPGPVRRFPNRAANRT-PYAAP----KAPETAWQHDMFIDQTSGFA-------VQAGR

Query:  ASAIQTGTKLYISNLDYGVSNEDIKELFSEVGDMKHYSIHYDKSGRSKGTAEVVFSRRVDAVAAVKKYNNVQLDGKPMKIEIVGTNIATPAAVPTAAVA-
         S+I+TGTKLYISNLDYGVSNEDIKELFSEVGD+K Y IHYD+SGRSKGTAEVVFSRR DA+AAVK+YNNVQLDGK MKIEIVGTN++ P A+P  A A 
Subjt:  ASAIQTGTKLYISNLDYGVSNEDIKELFSEVGDMKHYSIHYDKSGRSKGTAEVVFSRRVDAVAAVKKYNNVQLDGKPMKIEIVGTNIATPAAVPTAAVA-

Query:  -PF----------ENLNGFPR-------RQQGRGGLPSRQRGGGGGGRGFGRGRGR---------GRGPSEKVSAEDLDADLEKYHAESMQ
         PF          EN NG          R +GRGG   R RGGG GG  F  GRG          GRG  E VSAEDLDA+L+KYH E+M+
Subjt:  -PF----------ENLNGFPR-------RQQGRGGLPSRQRGGGGGGRGFGRGRGR---------GRGPSEKVSAEDLDADLEKYHAESMQ

AT5G02530.2 RNA-binding (RRM/RBD/RNP motifs) family protein3.5e-6356.06Show/hide
Query:  MAAPLDMSLDDIIKNNKK---SR------SGNSRGGR-GRPSGPGPVRRFPNRAANRT-PYAAP----KAPETAWQHDMFIDQTSGFA-------VQAGR
        M+  LDMSLDDIIK+N+K   SR       GN+ GGR G  S  GP RRF NR   RT PY+ P    +A +  WQ+D+F    S  A          G 
Subjt:  MAAPLDMSLDDIIKNNKK---SR------SGNSRGGR-GRPSGPGPVRRFPNRAANRT-PYAAP----KAPETAWQHDMFIDQTSGFA-------VQAGR

Query:  ASAIQTGTKLYISNLDYGVSNEDIKELFSEVGDMKHYSIHYDKSGRSKGTAEVVFSRRVDAVAAVKKYNNVQLDGKPMKIEIVGTNIATPAAVPTAAVA-
         S+I+TGTKLYISNLDYGVSNEDIKELFSEVGD+K Y IHYD+SGRSKGTAEVVFSRR DA+AAVK+YNNVQLDGK MKIEIVGTN++ P A+P  A A 
Subjt:  ASAIQTGTKLYISNLDYGVSNEDIKELFSEVGDMKHYSIHYDKSGRSKGTAEVVFSRRVDAVAAVKKYNNVQLDGKPMKIEIVGTNIATPAAVPTAAVA-

Query:  -PF----------ENLNG-----FPRRQQGRGGLPSRQRGGGGGGRGFGRGRGR---------GRGPSEKVSAEDLDADLEKYHAESMQ
         PF          EN NG     F    +GRGG   R RGGG GG  F  GRG          GRG  E VSAEDLDA+L+KYH E+M+
Subjt:  -PF----------ENLNG-----FPRRQQGRGGLPSRQRGGGGGGRGFGRGRGR---------GRGPSEKVSAEDLDADLEKYHAESMQ

AT5G59950.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.5e-6963.75Show/hide
Query:  MAAPLDMSLDDIIKNNKKSRSG-NSRGGRGRPSGPGPVRR-FPNRAANRT-PYAAPKAPETAWQHDMFIDQTSGFAVQAGRASA-IQTGTKLYISNLDYG
        M+  LDMSLDD+I  N+KSR G     G G  SGPGP RR  PNR + R+ PY + KAPE+ W HDMF D++     ++GR+SA I+TGTKLYISNLDYG
Subjt:  MAAPLDMSLDDIIKNNKKSRSG-NSRGGRGRPSGPGPVRR-FPNRAANRT-PYAAPKAPETAWQHDMFIDQTSGFAVQAGRASA-IQTGTKLYISNLDYG

Query:  VSNEDIKELFSEVGDMKHYSIHYDKSGRSKGTAEVVFSRRVDAVAAVKKYNNVQLDGKPMKIEIVGTNIATPAAVPTAAVAPFENLNGFP-RRQQGRGGL
        V NEDIKELF+EVG++K Y++H+D+SGRSKGTAEVV+SRR DA+AAVKKYN+VQLDGKPMKIEIVGTN+ T AA P+   A   N NG P R  QGRGG 
Subjt:  VSNEDIKELFSEVGDMKHYSIHYDKSGRSKGTAEVVFSRRVDAVAAVKKYNNVQLDGKPMKIEIVGTNIATPAAVPTAAVAPFENLNGFP-RRQQGRGGL

Query:  PSRQRGG--GGGGR-GFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN
          +QRGG  GGGGR G GRGR  G+GP+EK+SAEDLDADL+KYH+  M+ N
Subjt:  PSRQRGG--GGGGR-GFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN

AT5G59950.3 RNA-binding (RRM/RBD/RNP motifs) family protein1.8e-6763.35Show/hide
Query:  MAAPLDMSLDDIIKNNKKSRSG-NSRGGRGRPSGPGPVRR-FPNRAANRT-PYAAPKAPETAWQHDMFIDQTSGFAVQAGRASA-IQTGTKLYISNLDYG
        M+  LDMSLDD+I  N+KSR G     G G  SGPGP RR  PNR + R+ PY +  APE+ W HDMF D++     ++GR+SA I+TGTKLYISNLDYG
Subjt:  MAAPLDMSLDDIIKNNKKSRSG-NSRGGRGRPSGPGPVRR-FPNRAANRT-PYAAPKAPETAWQHDMFIDQTSGFAVQAGRASA-IQTGTKLYISNLDYG

Query:  VSNEDIKELFSEVGDMKHYSIHYDKSGRSKGTAEVVFSRRVDAVAAVKKYNNVQLDGKPMKIEIVGTNIATPAAVPTAAVAPFENLNGFP-RRQQGRGGL
        V NEDIKELF+EVG++K Y++H+D+SGRSKGTAEVV+SRR DA+AAVKKYN+VQLDGKPMKIEIVGTN+ T AA P+   A   N NG P R  QGRGG 
Subjt:  VSNEDIKELFSEVGDMKHYSIHYDKSGRSKGTAEVVFSRRVDAVAAVKKYNNVQLDGKPMKIEIVGTNIATPAAVPTAAVAPFENLNGFP-RRQQGRGGL

Query:  PSRQRGG--GGGGR-GFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN
          +QRGG  GGGGR G GRGR  G+GP+EK+SAEDLDADL+KYH+  M+ N
Subjt:  PSRQRGG--GGGGR-GFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN

AT5G59950.5 RNA-binding (RRM/RBD/RNP motifs) family protein3.3e-6963.49Show/hide
Query:  MAAPLDMSLDDIIKNNKKSRSG-NSRGGRGRPSGPGPVRR-FPNRAANRT-PYAAPKAPETAWQHDMFIDQTSGFAVQAGRASA-IQTGTKLYISNLDYG
        M+  LDMSLDD+I  N+KSR G     G G  SGPGP RR  PNR + R+ PY + KAPE+ W HDMF D++     ++GR+SA I+TGTKLYISNLDYG
Subjt:  MAAPLDMSLDDIIKNNKKSRSG-NSRGGRGRPSGPGPVRR-FPNRAANRT-PYAAPKAPETAWQHDMFIDQTSGFAVQAGRASA-IQTGTKLYISNLDYG

Query:  VSNEDIKELFSEVGDMKHYSIHYDKSGRSKGTAEVVFSRRVDAVAAVKKYNNVQLDGKPMKIEIVGTNIATPAAVPTAAVAPFENLNGFP--RRQQGRGG
        V NEDIKELF+EVG++K Y++H+D+SGRSKGTAEVV+SRR DA+AAVKKYN+VQLDGKPMKIEIVGTN+ T AA P+   A   N NG P  R  QGRGG
Subjt:  VSNEDIKELFSEVGDMKHYSIHYDKSGRSKGTAEVVFSRRVDAVAAVKKYNNVQLDGKPMKIEIVGTNIATPAAVPTAAVAPFENLNGFP--RRQQGRGG

Query:  LPSRQRGG--GGGGR-GFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN
           +QRGG  GGGGR G GRGR  G+GP+EK+SAEDLDADL+KYH+  M+ N
Subjt:  LPSRQRGG--GGGGR-GFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCTCCTCTGGATATGAGCCTCGACGATATCATAAAGAACAACAAAAAATCCAGATCCGGAAATTCCAGAGGTGGTCGCGGCCGACCTTCCGGACCCGGTCCCGT
CCGCCGATTTCCCAATCGTGCCGCTAATCGCACGCCTTATGCCGCACCCAAGGCACCGGAAACGGCTTGGCAGCATGATATGTTTATCGATCAGACTTCTGGATTCGCTG
TGCAAGCGGGGCGAGCCTCTGCCATTCAGACTGGGACTAAGCTTTACATATCTAATTTGGATTACGGCGTTTCCAATGAAGATATCAAGGAACTTTTTTCAGAAGTTGGT
GATATGAAACACTACTCAATCCATTATGATAAGAGTGGAAGATCCAAGGGAACGGCAGAAGTAGTTTTCTCACGACGAGTAGATGCTGTTGCGGCTGTCAAGAAGTACAA
CAACGTGCAGCTTGATGGAAAACCAATGAAGATAGAGATTGTTGGAACTAATATTGCGACCCCTGCTGCTGTTCCTACTGCCGCTGTAGCCCCCTTCGAAAATTTAAACG
GGTTTCCTAGAAGGCAGCAAGGTAGGGGTGGTCTGCCATCACGTCAACGTGGCGGAGGCGGAGGAGGTCGTGGTTTTGGAAGAGGGCGTGGGAGAGGAAGAGGTCCCAGT
GAAAAAGTTTCTGCCGAAGATCTTGATGCGGACTTAGAGAAGTATCATGCCGAATCTATGCAAATAAATTAG
mRNA sequenceShow/hide mRNA sequence
GTGAGCATTACGGCGTCGTAGCGGGCAAAAACGCGTACAAACCATGACCCGACCCGATCCGACCCGATTATATTAAGTCTTCATATCAATATCAACAAATAAAAAATCTT
CAGGTATCGCCTTATTCTCTCCCAAACCCTTCTCTTCCGACGGAACAGCGAAACCCTAATTTCCTATTTTCTCAGTCTTCTCTTTCGACTGCTTCACTGTTTCTTCTCGA
TTTCTCTTCGAACATGGCTGCTCCTCTGGATATGAGCCTCGACGATATCATAAAGAACAACAAAAAATCCAGATCCGGAAATTCCAGAGGTGGTCGCGGCCGACCTTCCG
GACCCGGTCCCGTCCGCCGATTTCCCAATCGTGCCGCTAATCGCACGCCTTATGCCGCACCCAAGGCACCGGAAACGGCTTGGCAGCATGATATGTTTATCGATCAGACT
TCTGGATTCGCTGTGCAAGCGGGGCGAGCCTCTGCCATTCAGACTGGGACTAAGCTTTACATATCTAATTTGGATTACGGCGTTTCCAATGAAGATATCAAGGAACTTTT
TTCAGAAGTTGGTGATATGAAACACTACTCAATCCATTATGATAAGAGTGGAAGATCCAAGGGAACGGCAGAAGTAGTTTTCTCACGACGAGTAGATGCTGTTGCGGCTG
TCAAGAAGTACAACAACGTGCAGCTTGATGGAAAACCAATGAAGATAGAGATTGTTGGAACTAATATTGCGACCCCTGCTGCTGTTCCTACTGCCGCTGTAGCCCCCTTC
GAAAATTTAAACGGGTTTCCTAGAAGGCAGCAAGGTAGGGGTGGTCTGCCATCACGTCAACGTGGCGGAGGCGGAGGAGGTCGTGGTTTTGGAAGAGGGCGTGGGAGAGG
AAGAGGTCCCAGTGAAAAAGTTTCTGCCGAAGATCTTGATGCGGACTTAGAGAAGTATCATGCCGAATCTATGCAAATAAATTAGTGGATGCTTATATGCTTTGATGCAG
CCACCCCCCATCTGTTTGCTGTATCGCTACCATTGTCTTACCTTCGCAGAAATGGGCTATAGTGTTCCTTAGAATTGGTTTGAATTTCTTTACAACTTTTTGGGCTTTTG
TTGTTTAGCTTTCATATGACTTCAGCATGGTAATGTAATTGACGAACAGAAGTCAGTGTGTACTCTGCTTTCATTCACTAAGTCCTTTCTGTTTCATTTAATGAGTTGGG
AATCGAAGTGGATCTATTACCCTTTTGCCTCCCGATCACATCTGCAAGGATGACATTGGTTGGAATAAAATGCCACCCACCGCTGCAAATTATACAACAAATGAGTTGCT
GTTCCCAATTGAGGGAACTTCGACTCGATTAAAAACGAATATTTAACCATGAAGTGTTGAACATTTCAAGGGTTGGCTAACGTGCTAAAAGACAAATAGTCTTGATAGCT
ATGGGATCCGACTTGGTCGAATTATTTTAAGAAACTACCAAGCTGAATTTGTTGCCTTTTGGTCTTACGGAATCCTCATCTCTGCCTGCGTTTTATGGTAAAAATGCCTG
GTTACAGGTGATATTCTTGTTTTAAAAGTAATTGTTGATCAAACATGTGCAACGTGGTGGTATTCTACTGCTGTTCTTGTGGAAAAATCCGCAGAGCAATTTGCCGCAAA
CATGGGGGCGGCGGGCATATTTATGAGGTACCATACCATCACTGGTGAGGACTGGACTGGTCAAGTTTTTCGATATCTGCTCGAGTTCTGCTAGCACATGATGGATTGCA
TCATGCGGTCTTGGCTGATCAACGAGCGGGAAAAACTTGGCCTCGCAGGAATTTATTTAAATACGCATTTTCTGCATGTGTTTGAATATGTTTTAAACCTTCCTGTGGAT
TGTGTTCCCATGTGTTAGTTATAGATGATGAAGGTATGTATAGTGGTGTAATGTTATTGGATTCTAGAACACATTCAGCGATGCCGTAAGTGGCTGTCTGTGTGTTTGAT
TTTATCTTTTCCTTTTTCTTTTTTGCTCTTCGATTAAGCAGCAAGAATTGCGAATTGCCCTTATCTTTAGCTTGTTCTATGCGTTTGGTATTAATGTATCTAGGTTGATC
GCGCTGTCCCAATTTTGGTATTTGTTATATGTTCTTAGGTTTTTACTAGATGTTACAGTATGAATTTTAACTCTTG
Protein sequenceShow/hide protein sequence
MAAPLDMSLDDIIKNNKKSRSGNSRGGRGRPSGPGPVRRFPNRAANRTPYAAPKAPETAWQHDMFIDQTSGFAVQAGRASAIQTGTKLYISNLDYGVSNEDIKELFSEVG
DMKHYSIHYDKSGRSKGTAEVVFSRRVDAVAAVKKYNNVQLDGKPMKIEIVGTNIATPAAVPTAAVAPFENLNGFPRRQQGRGGLPSRQRGGGGGGRGFGRGRGRGRGPS
EKVSAEDLDADLEKYHAESMQIN