; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC02g0814 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC02g0814
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionWUSCHEL-related homeobox 3
Genome locationMC02:6457637..6458622
RNA-Seq ExpressionMC02g0814
SyntenyMC02g0814
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0099402 - plant organ development (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR001356 - Homeobox domain
IPR009057 - Homeobox-like domain superfamily
IPR044555 - Protein WUSCHEL-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570743.1 WUSCHEL-related homeobox 3, partial [Cucurbita argyrosperma subsp. sororia]5.03e-7369.11Show/hide
Query:  MSPSSNSA--PSRWCPTPEQVMILEEIYGNGLKTPNATQIQHITSHLSLYGKIEGKNVFYWFQNHKARDRQKLRRKLFKQLQFQHHQMLLKRHRFDDNQF
        MSP++ +A  PSRWCPTPEQVMILEEIY NGLKTPNATQIQHITSHLSLYGKIEGKNVFYWFQNHKARDRQKLRRKL+KQLQ QHH   +KR RFDD+ F
Subjt:  MSPSSNSA--PSRWCPTPEQVMILEEIYGNGLKTPNATQIQHITSHLSLYGKIEGKNVFYWFQNHKARDRQKLRRKLFKQLQFQHHQMLLKRHRFDDNQF

Query:  FQCYFL-----HHHQRVPQQPLLTNPACFVHEDVEREEASATTKVEGCSDDRMMV-VEDEETTCRGGSLRTLELFPVSGSCVKAEENGSGN
        F C+       HHHQR P  PLL  P  F  E         TT+VEG  DD M V  ED ETTCR G+LRTLELFPV    VK EE GSGN
Subjt:  FQCYFL-----HHHQRVPQQPLLTNPACFVHEDVEREEASATTKVEGCSDDRMMV-VEDEETTCRGGSLRTLELFPVSGSCVKAEENGSGN

XP_004148244.1 WUSCHEL-related homeobox 3 [Cucumis sativus]1.77e-6567.51Show/hide
Query:  MSPSSNSAPSRWCPTPEQVMILEEIYGNGLKTPNATQIQHITSHLSLYGKIEGKNVFYWFQNHKARDRQKLRRKLFKQLQFQHHQMLLKRHRFDDNQ---
        MSPSS + PSRWCPTPEQVMILEEIY NGLKTPNATQIQHITSHLS YGKIEGKNVFYWFQNHKARDRQKLRRKL+KQLQ QHH   +KR RFDD+Q   
Subjt:  MSPSSNSAPSRWCPTPEQVMILEEIYGNGLKTPNATQIQHITSHLSLYGKIEGKNVFYWFQNHKARDRQKLRRKLFKQLQFQHHQMLLKRHRFDDNQ---

Query:  --FFQCYFLHHHQRVPQQ-PLLTNPACFVHEDVEREEASATTKVEGCSDDRMM------VVEDE--ETTCRGGSLRTLELFPVSGSCVKAEENGSGN
          FFQ YFL HH  VPQ  P L +P+    E  E E   A T+VEG    R M       VE+E  ETTC  G+LRTLELFPV  S VK EE  SGN
Subjt:  --FFQCYFLHHHQRVPQQ-PLLTNPACFVHEDVEREEASATTKVEGCSDDRMM------VVEDE--ETTCRGGSLRTLELFPVSGSCVKAEENGSGN

XP_008463857.1 PREDICTED: WUSCHEL-related homeobox 3 [Cucumis melo]4.24e-6667.35Show/hide
Query:  MSPSSNSAPSRWCPTPEQVMILEEIYGNGLKTPNATQIQHITSHLSLYGKIEGKNVFYWFQNHKARDRQKLRRKLFKQLQFQHHQMLLKRHRFDDNQ---
        MSPSS + PSRWCPTPEQVMILEEIY NGLKTPNATQIQHITSHLS YGKIEGKNVFYWFQNHKARDRQKLRRKL+KQLQ QHH   +KR RFDD+    
Subjt:  MSPSSNSAPSRWCPTPEQVMILEEIYGNGLKTPNATQIQHITSHLSLYGKIEGKNVFYWFQNHKARDRQKLRRKLFKQLQFQHHQMLLKRHRFDDNQ---

Query:  -FFQCYFLHHHQRVPQQ-PLLTNPACFVHEDVEREEASATTKVEGCS--------DDRMMVVEDEETTCRGGSLRTLELFPVSGSCVKAEENGSGN
         FFQ YFL HH  VPQ  P L +P+    E  E E   A T+VEG          D   +  ED ETTC  GSLRTLELFPV GS VK EE  SGN
Subjt:  -FFQCYFLHHHQRVPQQ-PLLTNPACFVHEDVEREEASATTKVEGCS--------DDRMMVVEDEETTCRGGSLRTLELFPVSGSCVKAEENGSGN

XP_022944088.1 putative WUSCHEL-related homeobox 2 [Cucurbita moschata]3.85e-7268.98Show/hide
Query:  MSPSSNSA---PSRWCPTPEQVMILEEIYGNGLKTPNATQIQHITSHLSLYGKIEGKNVFYWFQNHKARDRQKLRRKLFKQLQFQHHQMLLKRHRFDDNQ
        MSP++ +A   PSRWCPTPEQVMILEEIY NGLKTPNATQIQHITSHLSLYGKIEGKNVFYWFQNHKARDRQKLRRKL+KQLQ QHH   +KR RFDD+ 
Subjt:  MSPSSNSA---PSRWCPTPEQVMILEEIYGNGLKTPNATQIQHITSHLSLYGKIEGKNVFYWFQNHKARDRQKLRRKLFKQLQFQHHQMLLKRHRFDDNQ

Query:  FFQCYFLHHHQRVPQQPLLTNPACFVHEDVEREEASATTKVEGCSDDRMMV-VEDEETTCRGGSLRTLELFPVSGSCVKAEENGSGN
        FF C+  HH + +P  PLL  P  F  E  E      TT+VEG  DD M V  ED ETTC  G+LRTLELFPV    VK EE GSGN
Subjt:  FFQCYFLHHHQRVPQQPLLTNPACFVHEDVEREEASATTKVEGCSDDRMMV-VEDEETTCRGGSLRTLELFPVSGSCVKAEENGSGN

XP_038902731.1 WUSCHEL-related homeobox 3-like [Benincasa hispida]6.41e-6465.79Show/hide
Query:  MSPSSNSAPSRWCPTPEQVMILEEIYGNGLKTPNATQIQHITSHLSLYGKIEGKNVFYWFQNHKARDRQKLRRKLFKQLQFQHHQMLLKRHRFDDNQFFQ
        MSPS  + PSRWCPTPEQVMILEEIY NGLKTPNATQIQHITSHLS YGKIEGKNVFYWFQNHKARDRQKLRRKL+KQLQ QHH  L+KRHRFD++  F 
Subjt:  MSPSSNSAPSRWCPTPEQVMILEEIYGNGLKTPNATQIQHITSHLSLYGKIEGKNVFYWFQNHKARDRQKLRRKLFKQLQFQHHQMLLKRHRFDDNQFFQ

Query:  CYFLHHHQRVPQQPLLTNPACFVHEDVEREEASATTKVEGC-------SDDRMMVVEDEETTCRGGSLRTLELFPVSGSCVKAEENGSGN
         YFL  H  VPQ  LL  P+    ++ E E A   T+VEG         +   +  ED ETTCR G+LRTLELFPV  S +K EE  SGN
Subjt:  CYFLHHHQRVPQQPLLTNPACFVHEDVEREEASATTKVEGC-------SDDRMMVVEDEETTCRGGSLRTLELFPVSGSCVKAEENGSGN

TrEMBL top hitse value%identityAlignment
A0A0A0KHT6 Homeobox domain-containing protein8.58e-6667.51Show/hide
Query:  MSPSSNSAPSRWCPTPEQVMILEEIYGNGLKTPNATQIQHITSHLSLYGKIEGKNVFYWFQNHKARDRQKLRRKLFKQLQFQHHQMLLKRHRFDDNQ---
        MSPSS + PSRWCPTPEQVMILEEIY NGLKTPNATQIQHITSHLS YGKIEGKNVFYWFQNHKARDRQKLRRKL+KQLQ QHH   +KR RFDD+Q   
Subjt:  MSPSSNSAPSRWCPTPEQVMILEEIYGNGLKTPNATQIQHITSHLSLYGKIEGKNVFYWFQNHKARDRQKLRRKLFKQLQFQHHQMLLKRHRFDDNQ---

Query:  --FFQCYFLHHHQRVPQQ-PLLTNPACFVHEDVEREEASATTKVEGCSDDRMM------VVEDE--ETTCRGGSLRTLELFPVSGSCVKAEENGSGN
          FFQ YFL HH  VPQ  P L +P+    E  E E   A T+VEG    R M       VE+E  ETTC  G+LRTLELFPV  S VK EE  SGN
Subjt:  --FFQCYFLHHHQRVPQQ-PLLTNPACFVHEDVEREEASATTKVEGCSDDRMM------VVEDE--ETTCRGGSLRTLELFPVSGSCVKAEENGSGN

A0A1S3CK69 WUSCHEL-related homeobox 32.05e-6667.35Show/hide
Query:  MSPSSNSAPSRWCPTPEQVMILEEIYGNGLKTPNATQIQHITSHLSLYGKIEGKNVFYWFQNHKARDRQKLRRKLFKQLQFQHHQMLLKRHRFDDNQ---
        MSPSS + PSRWCPTPEQVMILEEIY NGLKTPNATQIQHITSHLS YGKIEGKNVFYWFQNHKARDRQKLRRKL+KQLQ QHH   +KR RFDD+    
Subjt:  MSPSSNSAPSRWCPTPEQVMILEEIYGNGLKTPNATQIQHITSHLSLYGKIEGKNVFYWFQNHKARDRQKLRRKLFKQLQFQHHQMLLKRHRFDDNQ---

Query:  -FFQCYFLHHHQRVPQQ-PLLTNPACFVHEDVEREEASATTKVEGCS--------DDRMMVVEDEETTCRGGSLRTLELFPVSGSCVKAEENGSGN
         FFQ YFL HH  VPQ  P L +P+    E  E E   A T+VEG          D   +  ED ETTC  GSLRTLELFPV GS VK EE  SGN
Subjt:  -FFQCYFLHHHQRVPQQ-PLLTNPACFVHEDVEREEASATTKVEGCS--------DDRMMVVEDEETTCRGGSLRTLELFPVSGSCVKAEENGSGN

A0A4S4ELL6 Homeobox domain-containing protein1.29e-4049.5Show/hide
Query:  MSPSSNSAPSRWCPTPEQVMILEEIYGNGLKTPNATQIQHITSHLSLYGKIEGKNVFYWFQNHKARDRQKLRRKLFKQLQFQHHQMLLKRHRFDDNQFFQ
        MSP+ +S   RWCPTPEQ+MILEE+Y  GL+TPNATQIQ IT+HLS YGKIEGKNVFYWFQNHKARDRQKLRRKL +QL  Q  Q           QF Q
Subjt:  MSPSSNSAPSRWCPTPEQVMILEEIYGNGLKTPNATQIQHITSHLSLYGKIEGKNVFYWFQNHKARDRQKLRRKLFKQLQFQHHQMLLKRHRFDDNQFFQ

Query:  CYFLHHHQRVPQQP-LLTNPACFVH----EDVEREEASATTKV------EGCSDDR----------MMVVEDEETT--CRGGSLRTLELFPVSGSCVKAE
         +FL      PQ P   T P  F+     EDV R   S +  V      E C  D+          MM+++ E  T  C    L+TLELFP++ + +K E
Subjt:  CYFLHHHQRVPQQP-LLTNPACFVH----EDVEREEASATTKV------EGCSDDR----------MMVVEDEETT--CRGGSLRTLELFPVSGSCVKAE

A0A4Y1RMG3 Homeodomain-like superfamily protein7.38e-4169.03Show/hide
Query:  MSPSSNSAPSRWCPTPEQVMILEEIYGNGLKTPNATQIQHITSHLSLYGKIEGKNVFYWFQNHKARDRQKLRRKLFKQLQFQHHQMLLKRHRFDDNQFFQ
        MSP++NS+ SRWCPTPEQ+MILEE+Y  G++TPNA+QIQHIT+ LSLYGKIEGKNVFYWFQNHKARDRQKLRRKL KQLQ Q  Q+L   H    N    
Subjt:  MSPSSNSAPSRWCPTPEQVMILEEIYGNGLKTPNATQIQHITSHLSLYGKIEGKNVFYWFQNHKARDRQKLRRKLFKQLQFQHHQMLLKRHRFDDNQFFQ

Query:  CYFLHHHQRVPQQ
         Y  HHHQ+  QQ
Subjt:  CYFLHHHQRVPQQ

A0A6J1FXP0 putative WUSCHEL-related homeobox 21.86e-7268.98Show/hide
Query:  MSPSSNSA---PSRWCPTPEQVMILEEIYGNGLKTPNATQIQHITSHLSLYGKIEGKNVFYWFQNHKARDRQKLRRKLFKQLQFQHHQMLLKRHRFDDNQ
        MSP++ +A   PSRWCPTPEQVMILEEIY NGLKTPNATQIQHITSHLSLYGKIEGKNVFYWFQNHKARDRQKLRRKL+KQLQ QHH   +KR RFDD+ 
Subjt:  MSPSSNSA---PSRWCPTPEQVMILEEIYGNGLKTPNATQIQHITSHLSLYGKIEGKNVFYWFQNHKARDRQKLRRKLFKQLQFQHHQMLLKRHRFDDNQ

Query:  FFQCYFLHHHQRVPQQPLLTNPACFVHEDVEREEASATTKVEGCSDDRMMV-VEDEETTCRGGSLRTLELFPVSGSCVKAEENGSGN
        FF C+  HH + +P  PLL  P  F  E  E      TT+VEG  DD M V  ED ETTC  G+LRTLELFPV    VK EE GSGN
Subjt:  FFQCYFLHHHQRVPQQPLLTNPACFVHEDVEREEASATTKVEGCSDDRMMV-VEDEETTCRGGSLRTLELFPVSGSCVKAEENGSGN

SwissProt top hitse value%identityAlignment
A2XZR3 Putative WUSCHEL-related homeobox 22.5e-2655.08Show/hide
Query:  SRWCPTPEQVMILEEIYGNGLKTPNATQIQHITSHLSLYGKIEGKNVFYWFQNHKARDRQKLRRKLFKQLQFQHHQMLLKRHRFDDNQFFQCYFLHHHQR
        +RWCPTPEQ+M+LEE+Y  GL+TPNA QIQ IT+HLS YG+IEGKNVFYWFQNHKARDRQKLRR+L       HH +               ++ HHH  
Subjt:  SRWCPTPEQVMILEEIYGNGLKTPNATQIQHITSHLSLYGKIEGKNVFYWFQNHKARDRQKLRRKLFKQLQFQHHQMLLKRHRFDDNQFFQCYFLHHHQR

Query:  -----VPQQPLLT--NPA
             VP   LLT  NP+
Subjt:  -----VPQQPLLT--NPA

Q5W7C3 Putative WUSCHEL-related homeobox 29.5e-2659.18Show/hide
Query:  SRWCPTPEQVMILEEIYGNGLKTPNATQIQHITSHLSLYGKIEGKNVFYWFQNHKARDRQKLRRKLFKQLQFQHHQMLLKRHRFDDNQFFQCYFLHHH
        +RWCPTPEQ+M+LEE+Y  GL+TPNA QIQ IT+HLS YG+IEGKNVFYWFQNHKARDRQKLRR+L       HH +               ++ HHH
Subjt:  SRWCPTPEQVMILEEIYGNGLKTPNATQIQHITSHLSLYGKIEGKNVFYWFQNHKARDRQKLRRKLFKQLQFQHHQMLLKRHRFDDNQFFQCYFLHHH

Q6S3I3 WUSCHEL-related homeobox 3B2.8e-2568.42Show/hide
Query:  SRWCPTPEQVMILEEIYGNGLKTPNATQIQHITSHLSLYGKIEGKNVFYWFQNHKARDRQKLRRKLFKQLQFQHHQ
        +RWCPTPEQ+MILEE+Y +G++TPNA +IQ IT+HL+ YG+IEGKNVFYWFQNHKAR+RQ+LRR+L  + Q Q+ Q
Subjt:  SRWCPTPEQVMILEEIYGNGLKTPNATQIQHITSHLSLYGKIEGKNVFYWFQNHKARDRQKLRRKLFKQLQFQHHQ

Q70UV1 WUSCHEL-related homeobox 3A2.8e-2568.42Show/hide
Query:  SRWCPTPEQVMILEEIYGNGLKTPNATQIQHITSHLSLYGKIEGKNVFYWFQNHKARDRQKLRRKLFKQLQFQHHQ
        +RWCPTPEQ+MILEE+Y +G++TPNA +IQ IT+HL+ YG+IEGKNVFYWFQNHKAR+RQ+LRR+L  + Q Q+ Q
Subjt:  SRWCPTPEQVMILEEIYGNGLKTPNATQIQHITSHLSLYGKIEGKNVFYWFQNHKARDRQKLRRKLFKQLQFQHHQ

Q9SIB4 WUSCHEL-related homeobox 38.3e-3073.17Show/hide
Query:  APSRWCPTPEQVMILEEIYGNGLKTPNATQIQHITSHLSLYGKIEGKNVFYWFQNHKARDRQKLRRKLFKQLQFQHHQMLLK
        A +RWCPTPEQ+MILEE+Y +G++TPNA QIQ IT+HL+ YG+IEGKNVFYWFQNHKARDRQKLR+KL KQL  Q HQ+ L+
Subjt:  APSRWCPTPEQVMILEEIYGNGLKTPNATQIQHITSHLSLYGKIEGKNVFYWFQNHKARDRQKLRRKLFKQLQFQHHQMLLK

Arabidopsis top hitse value%identityAlignment
AT1G46480.1 WUSCHEL related homeobox 41.6e-2063.01Show/hide
Query:  SRWCPTPEQVMILEEIYGNGLKTPNATQIQHITSHLSLYGKIEGKNVFYWFQNHKARDRQKLRRKLFKQLQFQ
        +RW PT EQ+ ILE +Y  G++TPNA QI+HIT  L  YGKIEGKNVFYWFQNHKAR+RQK +R     L  Q
Subjt:  SRWCPTPEQVMILEEIYGNGLKTPNATQIQHITSHLSLYGKIEGKNVFYWFQNHKARDRQKLRRKLFKQLQFQ

AT2G28610.1 Homeodomain-like superfamily protein5.9e-3173.17Show/hide
Query:  APSRWCPTPEQVMILEEIYGNGLKTPNATQIQHITSHLSLYGKIEGKNVFYWFQNHKARDRQKLRRKLFKQLQFQHHQMLLK
        A +RWCPTPEQ+MILEE+Y +G++TPNA QIQ IT+HL+ YG+IEGKNVFYWFQNHKARDRQKLR+KL KQL  Q HQ+ L+
Subjt:  APSRWCPTPEQVMILEEIYGNGLKTPNATQIQHITSHLSLYGKIEGKNVFYWFQNHKARDRQKLRRKLFKQLQFQHHQMLLK

AT3G11260.1 WUSCHEL related homeobox 55.2e-1960Show/hide
Query:  RWCPTPEQVMILEEIYGNGLKTPNATQIQHITSHLSLYGKIEGKNVFYWFQNHKARDRQKLRRKLFKQLQFQHHQ
        RW PT EQ+ IL +++  GL+TP   QIQ I++ LS YGKIE KNVFYWFQNHKAR+RQK RRK+       HHQ
Subjt:  RWCPTPEQVMILEEIYGNGLKTPNATQIQHITSHLSLYGKIEGKNVFYWFQNHKARDRQKLRRKLFKQLQFQHHQ

AT3G18010.1 WUSCHEL related homeobox 11.2e-2054.44Show/hide
Query:  SRWCPTPEQVMILEEIYGNGLKTPNATQIQHITSHLSLYGKIEGKNVFYWFQNHKARDRQKLRRKLFKQLQFQHHQMLLKRHRFDDNQFF
        SRW PTP+Q+ +LEE+Y  G +TP+A  IQ IT+ L  YGKIEGKNVFYWFQNHKAR+RQK RR    Q++  H + +L       N  F
Subjt:  SRWCPTPEQVMILEEIYGNGLKTPNATQIQHITSHLSLYGKIEGKNVFYWFQNHKARDRQKLRRKLFKQLQFQHHQMLLKRHRFDDNQFF

AT5G59340.1 WUSCHEL related homeobox 25.2e-1956.34Show/hide
Query:  SSNSAPSRWCPTPEQVMILEEIYGNGLKTPNATQIQHITSHLSLYGKIEGKNVFYWFQNHKARDRQKLRRK
        +  ++ SRW PT +Q+ +LE +Y  G++TP+A QIQ IT  L  YG IEGKNVFYWFQNHKAR RQK +++
Subjt:  SSNSAPSRWCPTPEQVMILEEIYGNGLKTPNATQIQHITSHLSLYGKIEGKNVFYWFQNHKARDRQKLRRK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCCCTTCTTCTAATTCTGCGCCATCTCGATGGTGCCCAACGCCGGAACAGGTGATGATTTTGGAGGAGATTTATGGCAATGGTTTGAAGACTCCCAATGCCACGCA
GATTCAGCACATAACTTCCCATCTTTCGTTGTATGGGAAAATTGAGGGCAAAAACGTCTTCTACTGGTTTCAGAACCACAAGGCCAGAGACCGCCAGAAGCTGCGGAGGA
AGCTCTTTAAGCAGCTCCAGTTCCAGCACCACCAGATGTTGTTGAAACGCCACCGTTTTGATGACAACCAGTTTTTCCAGTGCTACTTTCTTCACCACCACCAGCGAGTG
CCGCAACAGCCCCTGCTTACTAATCCTGCGTGTTTTGTTCACGAGGATGTGGAGAGGGAGGAGGCGTCGGCGACGACGAAGGTGGAGGGTTGCAGCGATGATCGGATGAT
GGTGGTGGAAGATGAAGAGACGACATGTCGTGGAGGGAGTCTTCGGACGTTGGAACTGTTTCCGGTGAGTGGGAGTTGCGTGAAGGCAGAAGAAAACGGTAGCGGGAAC
mRNA sequenceShow/hide mRNA sequence
ATGTCCCCTTCTTCTAATTCTGCGCCATCTCGATGGTGCCCAACGCCGGAACAGGTGATGATTTTGGAGGAGATTTATGGCAATGGTTTGAAGACTCCCAATGCCACGCA
GATTCAGCACATAACTTCCCATCTTTCGTTGTATGGGAAAATTGAGGGCAAAAACGTCTTCTACTGGTTTCAGAACCACAAGGCCAGAGACCGCCAGAAGCTGCGGAGGA
AGCTCTTTAAGCAGCTCCAGTTCCAGCACCACCAGATGTTGTTGAAACGCCACCGTTTTGATGACAACCAGTTTTTCCAGTGCTACTTTCTTCACCACCACCAGCGAGTG
CCGCAACAGCCCCTGCTTACTAATCCTGCGTGTTTTGTTCACGAGGATGTGGAGAGGGAGGAGGCGTCGGCGACGACGAAGGTGGAGGGTTGCAGCGATGATCGGATGAT
GGTGGTGGAAGATGAAGAGACGACATGTCGTGGAGGGAGTCTTCGGACGTTGGAACTGTTTCCGGTGAGTGGGAGTTGCGTGAAGGCAGAAGAAAACGGTAGCGGGAAC
Protein sequenceShow/hide protein sequence
MSPSSNSAPSRWCPTPEQVMILEEIYGNGLKTPNATQIQHITSHLSLYGKIEGKNVFYWFQNHKARDRQKLRRKLFKQLQFQHHQMLLKRHRFDDNQFFQCYFLHHHQRV
PQQPLLTNPACFVHEDVEREEASATTKVEGCSDDRMMVVEDEETTCRGGSLRTLELFPVSGSCVKAEENGSGN