; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC02g0838 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC02g0838
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionPre-mRNA-splicing factor SYF2
Genome locationMC02:6645503..6648668
RNA-Seq ExpressionMC02g0838
SyntenyMC02g0838
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0000974 - Prp19 complex (cellular component)
GO:0071013 - catalytic step 2 spliceosome (cellular component)
GO:0071014 - post-mRNA release spliceosomal complex (cellular component)
InterPro domainsIPR013260 - mRNA splicing factor SYF2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7027023.1 Pre-mRNA-splicing factor syf2 [Cucurbita argyrosperma subsp. argyrosperma]4.10e-20491.24Show/hide
Query:  LALSVTGVRDVVEEMSEEGRVHPDCRNASNPYHECSEYCFKIIAEVKARNQQNEQARWSSGSSGQAGRSSA-SNFAPPDEYEDLHDEKPDIEGHSDGDVD
        + L +  VRDVV EMS+EGRVHPDCRNASNPYHECSEYCF+IIAEVKARNQQNE    SS  + QAGRSSA SNFAPPDEYEDLHDEKP+ EGHSDGD D
Subjt:  LALSVTGVRDVVEEMSEEGRVHPDCRNASNPYHECSEYCFKIIAEVKARNQQNEQARWSSGSSGQAGRSSA-SNFAPPDEYEDLHDEKPDIEGHSDGDVD

Query:  KSSEENENVEGDFTKLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKW
        K S   ENVEGDFTKLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKW
Subjt:  KSSEENENVEGDFTKLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKW

Query:  EKDPAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEYNKMKDSDPEFYREASSLQYGKAPKISEDKIDNMVKELKERDEKRKSFSRRRKFHEDKDIDSINDR
        EKDPAPYGWDVFNQKTLY+AYKKRTKNVNVDLEEYNKMK+SDPEFYREASSLQYGKAPKISEDKIDNMVKELK+R+EKRKSFSRRRKFHEDKDIDSINDR
Subjt:  EKDPAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEYNKMKDSDPEFYREASSLQYGKAPKISEDKIDNMVKELKERDEKRKSFSRRRKFHEDKDIDSINDR

Query:  NEHFNKKIERAFGRYTLEIKNNLERGTALPD
        NEHFNKKIERAFGRYTLEIKNNLERGTALPD
Subjt:  NEHFNKKIERAFGRYTLEIKNNLERGTALPD

XP_022146277.1 pre-mRNA-splicing factor syf2 [Momordica charantia]2.01e-21794.33Show/hide
Query:  MSEEGRVHPDCRNASNPYHECSEYCFKIIAEVKARNQQNEQ-------------------ARWSSGSSGQAGRSSASNFAPPDEYEDLHDEKPDIEGHSD
        MSEEGRVHPDCRNASNPYHECSEYCFKIIAEVKARNQQNEQ                   ARWSSGSSGQAGRSSASNFAPPDEYEDLHDEKPDIEGHSD
Subjt:  MSEEGRVHPDCRNASNPYHECSEYCFKIIAEVKARNQQNEQ-------------------ARWSSGSSGQAGRSSASNFAPPDEYEDLHDEKPDIEGHSD

Query:  GDVDKSSEENENVEGDFTKLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESK
        GDVDKSSEENENVEGDFTKLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESK
Subjt:  GDVDKSSEENENVEGDFTKLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESK

Query:  YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEYNKMKDSDPEFYREASSLQYGKAPKISEDKIDNMVKELKERDEKRKSFSRRRKFHEDKDIDS
        YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEYNKMKDSDPEFYREASSLQYGKAPKISEDKIDNMVKELKERDEKRKSFSRRRKFHEDKDIDS
Subjt:  YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEYNKMKDSDPEFYREASSLQYGKAPKISEDKIDNMVKELKERDEKRKSFSRRRKFHEDKDIDS

Query:  INDRNEHFNKKIERAFGRYTLEIKNNLERGTALPD
        INDRNEHFNKKIERAFGRYTLEIKNNLERGTALPD
Subjt:  INDRNEHFNKKIERAFGRYTLEIKNNLERGTALPD

XP_022947463.1 pre-mRNA-splicing factor syf2-like [Cucurbita moschata]3.69e-19992.74Show/hide
Query:  MSEEGRVHPDCRNASNPYHECSEYCFKIIAEVKARNQQNEQARWSSGSSGQAGRSSA-SNFAPPDEYEDLHDEKPDIEGHSDGDVDKSSEENENVEGDFT
        MS+EGRVHPDCRNASNPYHECSEYCF+IIAEVKARNQQNE    SS  + QAGRSSA SNFAPPDEYEDLHDEKP+ EGHSDGD DK S   ENVEGDFT
Subjt:  MSEEGRVHPDCRNASNPYHECSEYCFKIIAEVKARNQQNEQARWSSGSSGQAGRSSA-SNFAPPDEYEDLHDEKPDIEGHSDGDVDKSSEENENVEGDFT

Query:  KLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQ
        KLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLE+RKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQ
Subjt:  KLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQ

Query:  KTLYNAYKKRTKNVNVDLEEYNKMKDSDPEFYREASSLQYGKAPKISEDKIDNMVKELKERDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGR
        KTLY+AYKKRTKNVNVDLEEYNKMK+SDPEFYREASSLQYGKAPKISEDKIDNMVKELK+R+EKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGR
Subjt:  KTLYNAYKKRTKNVNVDLEEYNKMKDSDPEFYREASSLQYGKAPKISEDKIDNMVKELKERDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGR

Query:  YTLEIKNNLERGTALPD
        YTLEIKNNLERGTALPD
Subjt:  YTLEIKNNLERGTALPD

XP_023532640.1 pre-mRNA-splicing factor syf2-like [Cucurbita pepo subsp. pepo]2.89e-20491.24Show/hide
Query:  LALSVTGVRDVVEEMSEEGRVHPDCRNASNPYHECSEYCFKIIAEVKARNQQNEQARWSSGSSGQAGRSSA-SNFAPPDEYEDLHDEKPDIEGHSDGDVD
        + L +  VRDVV EMS+EGRVHPDCRNASNPYHECSEYCF+IIAEVKARNQQNE    SS  + QAGRSSA SNFAPPDEYEDLHDEKP+ EGHSDGD D
Subjt:  LALSVTGVRDVVEEMSEEGRVHPDCRNASNPYHECSEYCFKIIAEVKARNQQNEQARWSSGSSGQAGRSSA-SNFAPPDEYEDLHDEKPDIEGHSDGDVD

Query:  KSSEENENVEGDFTKLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKW
        K S E ENVEGDFTKLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLE+RKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKW
Subjt:  KSSEENENVEGDFTKLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKW

Query:  EKDPAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEYNKMKDSDPEFYREASSLQYGKAPKISEDKIDNMVKELKERDEKRKSFSRRRKFHEDKDIDSINDR
        EKDPAPYGWDVFNQKTLY+AYKKRTKNVNVDLEEYNKMK+SDPEFYREASSLQYGKAPKISEDKIDNMVKELK+R+EKRKSFSRRRKFHEDKDIDSINDR
Subjt:  EKDPAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEYNKMKDSDPEFYREASSLQYGKAPKISEDKIDNMVKELKERDEKRKSFSRRRKFHEDKDIDSINDR

Query:  NEHFNKKIERAFGRYTLEIKNNLERGTALPD
        NEHFNKKIERAFGRYTLEIKNNLERGTALPD
Subjt:  NEHFNKKIERAFGRYTLEIKNNLERGTALPD

XP_023532641.1 pre-mRNA-splicing factor syf2-like [Cucurbita pepo subsp. pepo]4.50e-20093.06Show/hide
Query:  MSEEGRVHPDCRNASNPYHECSEYCFKIIAEVKARNQQNEQARWSSGSSGQAGRSSA-SNFAPPDEYEDLHDEKPDIEGHSDGDVDKSSEENENVEGDFT
        MS+EGRVHPDCRNASNPYHECSEYCF+IIAEVKARNQQNE    SS  + QAGRSSA SNFAPPDEYEDLHDEKP+ EGHSDGD DK S E ENVEGDFT
Subjt:  MSEEGRVHPDCRNASNPYHECSEYCFKIIAEVKARNQQNEQARWSSGSSGQAGRSSA-SNFAPPDEYEDLHDEKPDIEGHSDGDVDKSSEENENVEGDFT

Query:  KLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQ
        KLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLE+RKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQ
Subjt:  KLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQ

Query:  KTLYNAYKKRTKNVNVDLEEYNKMKDSDPEFYREASSLQYGKAPKISEDKIDNMVKELKERDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGR
        KTLY+AYKKRTKNVNVDLEEYNKMK+SDPEFYREASSLQYGKAPKISEDKIDNMVKELK+R+EKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGR
Subjt:  KTLYNAYKKRTKNVNVDLEEYNKMKDSDPEFYREASSLQYGKAPKISEDKIDNMVKELKERDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGR

Query:  YTLEIKNNLERGTALPD
        YTLEIKNNLERGTALPD
Subjt:  YTLEIKNNLERGTALPD

TrEMBL top hitse value%identityAlignment
A0A0A0LJ81 Pre-mRNA-splicing factor SYF27.27e-19991.48Show/hide
Query:  MSEEGRVHPDCRNASNPYHECSEYCFKIIAEVKARNQQNEQARWSSGSSGQAGRSS-ASNFAPPDEYEDLHDEKPDIEGHSDGDVDKSSEENENVEGDFT
        MS+EGRVHPDCRNASNPYHECSEYCFK+IAE+KAR+Q+NE    SS  + QAGRSS +S+F PPDEYEDLHDEKPD EGHSDGD+DK S E ENVEGDFT
Subjt:  MSEEGRVHPDCRNASNPYHECSEYCFKIIAEVKARNQQNEQARWSSGSSGQAGRSS-ASNFAPPDEYEDLHDEKPDIEGHSDGDVDKSSEENENVEGDFT

Query:  KLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQ
        KLTGRKKKLFE+RLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAE+KYKKWEKDPAPYGWDVFNQ
Subjt:  KLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQ

Query:  KTLYNAYKKRTKNVNVDLEEYNKMKDSDPEFYREASSLQYGKAPKISEDKIDNMVKELKERDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGR
        KTLYNAYKKRTKNVN+DLEEYNKMK+SDPEFYREASSLQYGKAPKISEDKIDNMVKELK+RDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGR
Subjt:  KTLYNAYKKRTKNVNVDLEEYNKMKDSDPEFYREASSLQYGKAPKISEDKIDNMVKELKERDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGR

Query:  YTLEIKNNLERGTALPD
        YTLEIKNNLERGTALPD
Subjt:  YTLEIKNNLERGTALPD

A0A6J1CY64 Pre-mRNA-splicing factor SYF29.75e-21894.33Show/hide
Query:  MSEEGRVHPDCRNASNPYHECSEYCFKIIAEVKARNQQNEQ-------------------ARWSSGSSGQAGRSSASNFAPPDEYEDLHDEKPDIEGHSD
        MSEEGRVHPDCRNASNPYHECSEYCFKIIAEVKARNQQNEQ                   ARWSSGSSGQAGRSSASNFAPPDEYEDLHDEKPDIEGHSD
Subjt:  MSEEGRVHPDCRNASNPYHECSEYCFKIIAEVKARNQQNEQ-------------------ARWSSGSSGQAGRSSASNFAPPDEYEDLHDEKPDIEGHSD

Query:  GDVDKSSEENENVEGDFTKLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESK
        GDVDKSSEENENVEGDFTKLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESK
Subjt:  GDVDKSSEENENVEGDFTKLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESK

Query:  YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEYNKMKDSDPEFYREASSLQYGKAPKISEDKIDNMVKELKERDEKRKSFSRRRKFHEDKDIDS
        YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEYNKMKDSDPEFYREASSLQYGKAPKISEDKIDNMVKELKERDEKRKSFSRRRKFHEDKDIDS
Subjt:  YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEYNKMKDSDPEFYREASSLQYGKAPKISEDKIDNMVKELKERDEKRKSFSRRRKFHEDKDIDS

Query:  INDRNEHFNKKIERAFGRYTLEIKNNLERGTALPD
        INDRNEHFNKKIERAFGRYTLEIKNNLERGTALPD
Subjt:  INDRNEHFNKKIERAFGRYTLEIKNNLERGTALPD

A0A6J1G6N2 Pre-mRNA-splicing factor SYF21.79e-19992.74Show/hide
Query:  MSEEGRVHPDCRNASNPYHECSEYCFKIIAEVKARNQQNEQARWSSGSSGQAGRSSA-SNFAPPDEYEDLHDEKPDIEGHSDGDVDKSSEENENVEGDFT
        MS+EGRVHPDCRNASNPYHECSEYCF+IIAEVKARNQQNE    SS  + QAGRSSA SNFAPPDEYEDLHDEKP+ EGHSDGD DK S   ENVEGDFT
Subjt:  MSEEGRVHPDCRNASNPYHECSEYCFKIIAEVKARNQQNEQARWSSGSSGQAGRSSA-SNFAPPDEYEDLHDEKPDIEGHSDGDVDKSSEENENVEGDFT

Query:  KLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQ
        KLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLE+RKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQ
Subjt:  KLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQ

Query:  KTLYNAYKKRTKNVNVDLEEYNKMKDSDPEFYREASSLQYGKAPKISEDKIDNMVKELKERDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGR
        KTLY+AYKKRTKNVNVDLEEYNKMK+SDPEFYREASSLQYGKAPKISEDKIDNMVKELK+R+EKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGR
Subjt:  KTLYNAYKKRTKNVNVDLEEYNKMKDSDPEFYREASSLQYGKAPKISEDKIDNMVKELKERDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGR

Query:  YTLEIKNNLERGTALPD
        YTLEIKNNLERGTALPD
Subjt:  YTLEIKNNLERGTALPD

A0A6J1I290 Pre-mRNA-splicing factor SYF21.20e-19791.8Show/hide
Query:  MSEEGRVHPDCRNASNPYHECSEYCFKIIAEVKARNQQNEQARWSSGSSGQAGRSSAS-NFAPPDEYEDLHDEKPDIEGHSDGDVDKSSEENENVEGDFT
        MS+EGRVHPDCRNASNPYHECSEYCFKIIAEVKA NQ+NE    SS  + QAGRSSA  NFAPPDEYEDLHDEKP+ EGHSDGD DK S   ENVEGDFT
Subjt:  MSEEGRVHPDCRNASNPYHECSEYCFKIIAEVKARNQQNEQARWSSGSSGQAGRSSAS-NFAPPDEYEDLHDEKPDIEGHSDGDVDKSSEENENVEGDFT

Query:  KLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQ
        KLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPP+ESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQ
Subjt:  KLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQ

Query:  KTLYNAYKKRTKNVNVDLEEYNKMKDSDPEFYREASSLQYGKAPKISEDKIDNMVKELKERDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGR
        KTLY+AYKKRTKNVNVD+EEYNKMK+SDPEFYREASSLQYGKAPKISEDKIDNMVKELK+R+EKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGR
Subjt:  KTLYNAYKKRTKNVNVDLEEYNKMKDSDPEFYREASSLQYGKAPKISEDKIDNMVKELKERDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGR

Query:  YTLEIKNNLERGTALPD
        YTLEIKNNLERGTALPD
Subjt:  YTLEIKNNLERGTALPD

A0A6J1JD37 Pre-mRNA-splicing factor SYF23.44e-19791.48Show/hide
Query:  MSEEGRVHPDCRNASNPYHECSEYCFKIIAEVKARNQQNEQARWSSGSSGQAGRSS-ASNFAPPDEYEDLHDEKPDIEGHSDGDVDKSSEENENVEGDFT
        MS+EGRVHPDCRNASNPYHEC+EYCFK+IAEVKARNQQNE    SS    QAGRSS +SNF PPDEYEDL DEKP+ EGHSDGD DK S   ENVEGDFT
Subjt:  MSEEGRVHPDCRNASNPYHECSEYCFKIIAEVKARNQQNEQARWSSGSSGQAGRSS-ASNFAPPDEYEDLHDEKPDIEGHSDGDVDKSSEENENVEGDFT

Query:  KLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQ
        KLTGRKKKLFE+RLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDM+KAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQ
Subjt:  KLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQ

Query:  KTLYNAYKKRTKNVNVDLEEYNKMKDSDPEFYREASSLQYGKAPKISEDKIDNMVKELKERDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGR
        KTLY+AYKKRTKNVNVDLEEYNKMKDSDPEFYREASSLQYGKAPKISEDKIDNMVKELK+R+EKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGR
Subjt:  KTLYNAYKKRTKNVNVDLEEYNKMKDSDPEFYREASSLQYGKAPKISEDKIDNMVKELKERDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGR

Query:  YTLEIKNNLERGTALPD
        YTLEIKNNLERGTALPD
Subjt:  YTLEIKNNLERGTALPD

SwissProt top hitse value%identityAlignment
Q28G05 Pre-mRNA-splicing factor syf21.1e-2539.27Show/hide
Query:  KLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPS--ESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLD--TQEAAESKYKKWEKDPAPYGWD
        K   R +K  EL LK NEARK N   +  E K+ + PS  E+R    +  L++ +KK  +   ANG+D  +A +L+   ++A   + KK  K+P   G+ 
Subjt:  KLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPS--ESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLD--TQEAAESKYKKWEKDPAPYGWD

Query:  VFNQKTLYNAYKKRTKNVNVDLEEYNKMKDSDPEFYREASSLQYGKAPKISEDKIDNMVKELKERDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIER
         +    L   Y++ TK +  D+EEY   K    E +   S   Y      S+  ID MV +L+++ EKR+ +SRRR +++D DID IN+RN  FNKK ER
Subjt:  VFNQKTLYNAYKKRTKNVNVDLEEYNKMKDSDPEFYREASSLQYGKAPKISEDKIDNMVKELKERDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIER

Query:  AFGRYTLEIKNNLERGTAL
         +G+YT EIK NLERGTA+
Subjt:  AFGRYTLEIKNNLERGTAL

Q4QRB2 Pre-mRNA-splicing factor SYF21.3e-2338.6Show/hide
Query:  RKKKLFELRLKMNEARKANQTAIAAEKKKMEPPS--ESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLD-TQEAAESKYKKWEKDPAPYGWDVFNQK
        R +K  EL LK NEARK N   +  E K+++ P+  E++    +  L++ +KK  K   A G D  K  +L+ + E AE   ++ +K     G+  +   
Subjt:  RKKKLFELRLKMNEARKANQTAIAAEKKKMEPPS--ESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLD-TQEAAESKYKKWEKDPAPYGWDVFNQK

Query:  TLYNAYKKRTKNVNVDLEEYNKMKDSDPE-FYREASSLQYGKAPKISEDKIDNMVKELKERDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGR
         L   Y + TK +  D+E Y + ++   E F+  ++SL +G     SE+ ID MV +L+++ EKR  +SRRR +++D DID IN+RN  FNKK ER +G+
Subjt:  TLYNAYKKRTKNVNVDLEEYNKMKDSDPE-FYREASSLQYGKAPKISEDKIDNMVKELKERDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGR

Query:  YTLEIKNNLERGTAL
        YT EIK NLERGTA+
Subjt:  YTLEIKNNLERGTAL

Q6DV01 Pre-mRNA-splicing factor syf23.0e-2336.02Show/hide
Query:  SEENENVEGDFTKLTGRK---KKLFELRLKMNEARKANQTAIAAEKKKMEPPSE-SRGISKQKW---LEDRKKKIGKLLDANGLDMTKAYMLD-TQEAAE
        SE+  ++  + T    R+   +K  EL LK NEARK N   +  E K+++ P+      S+ +W   +E++KK+      A G D  +  +L+ + E AE
Subjt:  SEENENVEGDFTKLTGRK---KKLFELRLKMNEARKANQTAIAAEKKKMEPPSE-SRGISKQKW---LEDRKKKIGKLLDANGLDMTKAYMLD-TQEAAE

Query:  SKYKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEYNKMK-DSDPEFYREASSLQYGKAPKISEDKIDNMVKELKERDEKRKSFSRRRKFHEDKD
           +K +K     G+  +    +   Y++ T+ +  DLE+Y K++ +S  EFY  ++SL +G      E  +D MV++L+++ +KR+ +SRRR +++D D
Subjt:  SKYKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEYNKMK-DSDPEFYREASSLQYGKAPKISEDKIDNMVKELKERDEKRKSFSRRRKFHEDKD

Query:  IDSINDRNEHFNKKIERAFGRYTLEIKNNLERGTAL
        ID IN+RN  FNKK ER +G+YT EIK NLERGTA+
Subjt:  IDSINDRNEHFNKKIERAFGRYTLEIKNNLERGTAL

Q8AVQ6 Pre-mRNA-splicing factor syf24.9e-2639.27Show/hide
Query:  KLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPS--ESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLD--TQEAAESKYKKWEKDPAPYGWD
        K   R +K  EL LK NEARK N   +  E K+ + PS  E+R    +  L++ +KK  +   ANG+D  +A +L+   ++A   + KK  K+P   G+ 
Subjt:  KLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPS--ESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLD--TQEAAESKYKKWEKDPAPYGWD

Query:  VFNQKTLYNAYKKRTKNVNVDLEEYNKMKDSDPEFYREASSLQYGKAPKISEDKIDNMVKELKERDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIER
         +    L   Y++ TK +  D+EEY   K+   E +   S   Y      S+  ID MV +L+++ EKR+ +SRRR +++D DID IN+RN  FNKK ER
Subjt:  VFNQKTLYNAYKKRTKNVNVDLEEYNKMKDSDPEFYREASSLQYGKAPKISEDKIDNMVKELKERDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIER

Query:  AFGRYTLEIKNNLERGTAL
         +G+YT EIK NLERGTA+
Subjt:  AFGRYTLEIKNNLERGTAL

Q9D198 Pre-mRNA-splicing factor SYF21.3e-2338.6Show/hide
Query:  RKKKLFELRLKMNEARKANQTAIAAEKKKMEPPS--ESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLD-TQEAAESKYKKWEKDPAPYGWDVFNQK
        R +K  EL LK NEARK N   +  E K+++ P+  E++    +  L++ +KK  K   A G D  K  +L+ + E AE   ++ +K     G+  +   
Subjt:  RKKKLFELRLKMNEARKANQTAIAAEKKKMEPPS--ESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLD-TQEAAESKYKKWEKDPAPYGWDVFNQK

Query:  TLYNAYKKRTKNVNVDLEEYNKMKDSDPE-FYREASSLQYGKAPKISEDKIDNMVKELKERDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGR
         L   Y + TK +  D+E Y + ++   E F+  ++SL +G     SE+ ID MV +L+++ EKR  +SRRR +++D DID IN+RN  FNKK ER +G+
Subjt:  TLYNAYKKRTKNVNVDLEEYNKMKDSDPE-FYREASSLQYGKAPKISEDKIDNMVKELKERDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGR

Query:  YTLEIKNNLERGTAL
        YT EIK NLERGTA+
Subjt:  YTLEIKNNLERGTAL

Arabidopsis top hitse value%identityAlignment
AT2G16860.1 GCIP-interacting family protein5.8e-11569.3Show/hide
Query:  MSEEGRVHPDCRNASNPYHECSEYCFKIIAEVKARNQQNEQARWSSGSSGQAGRSSASNFAPPDEYEDLHDEKPDIEGHSDGDVDKSSEENENVEGDFTK
        M  E RVHPDC NASNPYHEC EYCFK IAE KAR ++         ++G A     +        E L D++ +       + ++  E+N+  + D T+
Subjt:  MSEEGRVHPDCRNASNPYHECSEYCFKIIAEVKARNQQNEQARWSSGSSGQAGRSSASNFAPPDEYEDLHDEKPDIEGHSDGDVDKSSEENENVEGDFTK

Query:  LTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQK
        LTGR+KKLFELRLKMNEARK+NQT + +EKKKME P+E++GISKQKWLE RKKKIGKLLDANGLDMT+AYMLDTQEAAESKYKKWEK+P P GWDVFNQK
Subjt:  LTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQK

Query:  TLYNAYKKRTKNVNVDLEEYNKMKDSDPEFYREASSLQYGKAPKISEDKIDNMVKELKERDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRY
        TLYNAYKKRTKN+ VDLEEYN+M+ +DPEFYREASSLQYGKAPK S+DKID M KEL +R++KR+ FSRRRKF E+KDIDSINDRNEHFNKKIERAFG+Y
Subjt:  TLYNAYKKRTKNVNVDLEEYNKMKDSDPEFYREASSLQYGKAPKISEDKIDNMVKELKERDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRY

Query:  TLEIKNNLERGTALPD
        TLEIKNNLERGTALPD
Subjt:  TLEIKNNLERGTALPD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAAAATCTCGTGCCGTTCTTCTTTCCAAACTCGCGAAGAGAAGATTTCCCTTTCCTCTTCGTTTTCTACCCATACGGAAACCTAGCTCTCAGTGTTACTGGAGTAAGAGA
CGTTGTTGAAGAAATGTCTGAAGAAGGAAGGGTACACCCTGATTGCAGAAATGCTTCTAATCCTTATCATGAATGTAGCGAGTATTGCTTTAAAATAATTGCTGAAGTCA
AAGCCCGGAATCAGCAAAATGAGCAAGCTCGTTGGAGTAGTGGTTCTTCTGGTCAAGCTGGTCGAAGTAGTGCTTCCAATTTTGCTCCTCCGGATGAGTACGAAGATCTT
CATGATGAAAAGCCCGACATTGAAGGGCACAGTGATGGTGATGTTGACAAATCTAGTGAGGAGAACGAGAATGTGGAAGGAGACTTCACTAAACTCACGGGGAGGAAGAA
AAAGTTGTTTGAACTTAGGCTTAAGATGAATGAGGCGCGGAAAGCTAATCAGACAGCAATTGCTGCTGAAAAAAAGAAAATGGAACCTCCATCAGAATCAAGAGGCATTT
CTAAACAAAAGTGGCTTGAGGATCGGAAGAAAAAAATTGGGAAGCTTTTAGATGCAAATGGCTTGGATATGACAAAAGCATATATGTTAGATACACAAGAGGCAGCAGAG
TCCAAATATAAGAAATGGGAGAAGGATCCAGCTCCCTATGGATGGGATGTGTTTAATCAGAAAACGTTGTACAATGCATACAAAAAGCGGACAAAGAATGTAAATGTGGA
CCTTGAGGAATATAATAAAATGAAAGATTCTGATCCTGAGTTCTACCGCGAGGCTTCGAGTCTTCAATATGGAAAGGCACCTAAGATTTCAGAGGATAAGATTGACAATA
TGGTGAAAGAACTGAAGGAGCGGGATGAGAAGCGTAAGTCATTTAGCCGTAGGAGGAAGTTCCACGAAGACAAGGATATCGACTCTATCAATGATCGCAATGAGCATTTC
AACAAAAAGATTGAGCGGGCCTTTGGTAGATACACTCTGGAGATCAAAAACAATCTCGAGCGAGGAACTGCGTTGCCCGATTAA
mRNA sequenceShow/hide mRNA sequence
GAAAAATCTCGTGCCGTTCTTCTTTCCAAACTCGCGAAGAGAAGATTTCCCTTTCCTCTTCGTTTTCTACCCATACGGAAACCTAGCTCTCAGTGTTACTGGAGTAAGAG
ACGTTGTTGAAGAAATGTCTGAAGAAGGAAGGGTACACCCTGATTGCAGAAATGCTTCTAATCCTTATCATGAATGTAGCGAGTATTGCTTTAAAATAATTGCTGAAGTC
AAAGCCCGGAATCAGCAAAATGAGCAAGCTCGTTGGAGTAGTGGTTCTTCTGGTCAAGCTGGTCGAAGTAGTGCTTCCAATTTTGCTCCTCCGGATGAGTACGAAGATCT
TCATGATGAAAAGCCCGACATTGAAGGGCACAGTGATGGTGATGTTGACAAATCTAGTGAGGAGAACGAGAATGTGGAAGGAGACTTCACTAAACTCACGGGGAGGAAGA
AAAAGTTGTTTGAACTTAGGCTTAAGATGAATGAGGCGCGGAAAGCTAATCAGACAGCAATTGCTGCTGAAAAAAAGAAAATGGAACCTCCATCAGAATCAAGAGGCATT
TCTAAACAAAAGTGGCTTGAGGATCGGAAGAAAAAAATTGGGAAGCTTTTAGATGCAAATGGCTTGGATATGACAAAAGCATATATGTTAGATACACAAGAGGCAGCAGA
GTCCAAATATAAGAAATGGGAGAAGGATCCAGCTCCCTATGGATGGGATGTGTTTAATCAGAAAACGTTGTACAATGCATACAAAAAGCGGACAAAGAATGTAAATGTGG
ACCTTGAGGAATATAATAAAATGAAAGATTCTGATCCTGAGTTCTACCGCGAGGCTTCGAGTCTTCAATATGGAAAGGCACCTAAGATTTCAGAGGATAAGATTGACAAT
ATGGTGAAAGAACTGAAGGAGCGGGATGAGAAGCGTAAGTCATTTAGCCGTAGGAGGAAGTTCCACGAAGACAAGGATATCGACTCTATCAATGATCGCAATGAGCATTT
CAACAAAAAGATTGAGCGGGCCTTTGGTAGATACACTCTGGAGATCAAAAACAATCTCGAGCGAGGAACTGCGTTGCCCGATTAAGGTATTTGTTTAGACGAGGCGTTTC
TTCTAAATGCAACCTTACTGCTTCTCTTCTCCTCTAGGAATTTCGGAGAACTTATATCGAATCCTAGTAATAGCGACTGTTTAAAGCTTTTCCCTTGAATTTTAAAATAG
AGTTCTCCTGTAAAATATTTATCTGAAAAGCTACTAAATTCTCTAAATGGTAGAAAATTGATTGAAGGTGGCTTTCTTCTCGTAGATATGTACTAAAGCATCTCAGTAAT
AGAGGTTGTTTTCTTCCAACTTAACTCAAGCCTCACAGCAAACAAACCCTTGTTACTTGTTTGATTGATGTGATGAATGTGGTAGAATTTGTCCAATTTGAAACTTCAAA
TGGACAGGGCGGCTTTGAATTTTAATCCATG
Protein sequenceShow/hide protein sequence
KNLVPFFFPNSRREDFPFLFVFYPYGNLALSVTGVRDVVEEMSEEGRVHPDCRNASNPYHECSEYCFKIIAEVKARNQQNEQARWSSGSSGQAGRSSASNFAPPDEYEDL
HDEKPDIEGHSDGDVDKSSEENENVEGDFTKLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAE
SKYKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEYNKMKDSDPEFYREASSLQYGKAPKISEDKIDNMVKELKERDEKRKSFSRRRKFHEDKDIDSINDRNEHF
NKKIERAFGRYTLEIKNNLERGTALPD