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MC02g0926 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC02g0926
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationMC02:7381984..7382181
RNA-Seq ExpressionMC02g0926
SyntenyMC02g0926
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR032867 - DYW domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXC04410.1 hypothetical protein L484_008746 [Morus notabilis]9.07e-2469.7Show/hide
Query:  KKLATAVGLILLNMNSEIQIVKNLWSCEYCHEFMKPISKIYEREIIMRDRICFHHFGNGNCSCKDY
        +KLA A GLI  +  SEI+I KNL SCE CH FMK ISKIY+R+IIMRDRI FHHF NG+CSC+DY
Subjt:  KKLATAVGLILLNMNSEIQIVKNLWSCEYCHEFMKPISKIYEREIIMRDRICFHHFGNGNCSCKDY

KHN33731.1 Pentatricopeptide repeat-containing protein [Glycine soja]7.21e-2368.18Show/hide
Query:  KKLATAVGLILLNMNSEIQIVKNLWSCEYCHEFMKPISKIYEREIIMRDRICFHHFGNGNCSCKDY
        +KLA A GLI +   S I IVKNL SCE CHEFMK ISKI +R+I++RDRI FHHF NG CSCKDY
Subjt:  KKLATAVGLILLNMNSEIQIVKNLWSCEYCHEFMKPISKIYEREIIMRDRICFHHFGNGNCSCKDY

QHO31919.1 Pentatricopeptide repeat-containing protein [Arachis hypogaea]1.88e-2372.73Show/hide
Query:  KKLATAVGLILLNMNSEIQIVKNLWSCEYCHEFMKPISKIYEREIIMRDRICFHHFGNGNCSCKDY
        +KLA A GLI     SEI+IVKNL SCE CHEFMK +SKIY+REII+RDRI FHHF NG+CSCKDY
Subjt:  KKLATAVGLILLNMNSEIQIVKNLWSCEYCHEFMKPISKIYEREIIMRDRICFHHFGNGNCSCKDY

XP_016171339.1 pentatricopeptide repeat-containing protein At4g21065 [Arachis ipaensis]3.95e-2372.73Show/hide
Query:  KKLATAVGLILLNMNSEIQIVKNLWSCEYCHEFMKPISKIYEREIIMRDRICFHHFGNGNCSCKDY
        +KLA A GLI     SEI+IVKNL SCE CHEFMK +SKIY+REII+RDRI FHHF NG+CSCKDY
Subjt:  KKLATAVGLILLNMNSEIQIVKNLWSCEYCHEFMKPISKIYEREIIMRDRICFHHFGNGNCSCKDY

XP_025615078.1 pentatricopeptide repeat-containing protein At4g21065-like [Arachis hypogaea]3.90e-2372.73Show/hide
Query:  KKLATAVGLILLNMNSEIQIVKNLWSCEYCHEFMKPISKIYEREIIMRDRICFHHFGNGNCSCKDY
        +KLA A GLI     SEI+IVKNL SCE CHEFMK +SKIY+REII+RDRI FHHF NG+CSCKDY
Subjt:  KKLATAVGLILLNMNSEIQIVKNLWSCEYCHEFMKPISKIYEREIIMRDRICFHHFGNGNCSCKDY

TrEMBL top hitse value%identityAlignment
A0A2P5CVR0 DYW domain containing protein4.86e-2372.73Show/hide
Query:  KKLATAVGLILLNMNSEIQIVKNLWSCEYCHEFMKPISKIYEREIIMRDRICFHHFGNGNCSCKDY
        +KLA A GLI  +  +EI+IVKNL SCE CH FMK ISKIYER+IIMRDRI FHHF NG CSCKDY
Subjt:  KKLATAVGLILLNMNSEIQIVKNLWSCEYCHEFMKPISKIYEREIIMRDRICFHHFGNGNCSCKDY

A0A2P5DVS4 DYW domain containing protein6.65e-2372.73Show/hide
Query:  KKLATAVGLILLNMNSEIQIVKNLWSCEYCHEFMKPISKIYEREIIMRDRICFHHFGNGNCSCKDY
        +KLA A GLI     +EI+IVKNL SCE CH FMK ISKIYER+IIMRDRI FHHF NG CSCKDY
Subjt:  KKLATAVGLILLNMNSEIQIVKNLWSCEYCHEFMKPISKIYEREIIMRDRICFHHFGNGNCSCKDY

A0A392NSC3 Pentatricopeptide repeat-containing protein (Fragment)1.11e-2266.67Show/hide
Query:  KKLATAVGLILLNMNSEIQIVKNLWSCEYCHEFMKPISKIYEREIIMRDRICFHHFGNGNCSCKDY
        +KLA + GLI     S+I+IVKNL SC+ CHEFMK ISK+Y+R+II+RDRI FHHF NG+CSCKDY
Subjt:  KKLATAVGLILLNMNSEIQIVKNLWSCEYCHEFMKPISKIYEREIIMRDRICFHHFGNGNCSCKDY

A0A445C2F6 DYW_deaminase domain-containing protein5.86e-2371.21Show/hide
Query:  KKLATAVGLILLNMNSEIQIVKNLWSCEYCHEFMKPISKIYEREIIMRDRICFHHFGNGNCSCKDY
        +KLA A GLI     S+I+IVKNL SCE CHEFMK +SKIY+REII+RDRI FHHF NG+CSCKDY
Subjt:  KKLATAVGLILLNMNSEIQIVKNLWSCEYCHEFMKPISKIYEREIIMRDRICFHHFGNGNCSCKDY

W9RRB5 DYW_deaminase domain-containing protein4.39e-2469.7Show/hide
Query:  KKLATAVGLILLNMNSEIQIVKNLWSCEYCHEFMKPISKIYEREIIMRDRICFHHFGNGNCSCKDY
        +KLA A GLI  +  SEI+I KNL SCE CH FMK ISKIY+R+IIMRDRI FHHF NG+CSC+DY
Subjt:  KKLATAVGLILLNMNSEIQIVKNLWSCEYCHEFMKPISKIYEREIIMRDRICFHHFGNGNCSCKDY

SwissProt top hitse value%identityAlignment
Q9FG16 Pentatricopeptide repeat-containing protein At5g065406.7e-1454.55Show/hide
Query:  KKLATAVGLILLNMNSEIQIVKNLWSCEYCHEFMKPISKIYEREIIMRDRICFHHFGNGNCSCKDY
        +KLA A G++     + I+IVKNL  CE CH   K IS++Y RE+I+RDR  FHHF NG CSC+DY
Subjt:  KKLATAVGLILLNMNSEIQIVKNLWSCEYCHEFMKPISKIYEREIIMRDRICFHHFGNGNCSCKDY

Q9FI80 Pentatricopeptide repeat-containing protein At5g489101.0e-1456.06Show/hide
Query:  KKLATAVGLILLNMNSEIQIVKNLWSCEYCHEFMKPISKIYEREIIMRDRICFHHFGNGNCSCKDY
        +K+ATA GLI  +    I+IVKNL  CE CH  +K ISK+Y+R+I +RDR  FHHF +G+CSC DY
Subjt:  KKLATAVGLILLNMNSEIQIVKNLWSCEYCHEFMKPISKIYEREIIMRDRICFHHFGNGNCSCKDY

Q9FJY7 Pentatricopeptide repeat-containing protein At5g665206.7e-1454.55Show/hide
Query:  KKLATAVGLILLNMNSEIQIVKNLWSCEYCHEFMKPISKIYEREIIMRDRICFHHFGNGNCSCKDY
        +KLA   GLI     + I+I+KNL  C+ CH+  K ISKIY+R+I+MRDR  FHHF +G CSC DY
Subjt:  KKLATAVGLILLNMNSEIQIVKNLWSCEYCHEFMKPISKIYEREIIMRDRICFHHFGNGNCSCKDY

Q9LN01 Pentatricopeptide repeat-containing protein At1g08070, chloroplastic1.0e-1459.09Show/hide
Query:  KKLATAVGLILLNMNSEIQIVKNLWSCEYCHEFMKPISKIYEREIIMRDRICFHHFGNGNCSCKDY
        +KLA A GLI     +++ IVKNL  C  CHE  K ISKIY+REII RDR  FHHF +G CSC DY
Subjt:  KKLATAVGLILLNMNSEIQIVKNLWSCEYCHEFMKPISKIYEREIIMRDRICFHHFGNGNCSCKDY

Q9LXY5 Pentatricopeptide repeat-containing protein At3g565506.7e-1451.52Show/hide
Query:  KKLATAVGLILLNMNSEIQIVKNLWSCEYCHEFMKPISKIYEREIIMRDRICFHHFGNGNCSCKDY
        +KLA A GL+     + ++I KNL  C  CH F K +SK + REII+RDR+ FHHF +G CSC DY
Subjt:  KKLATAVGLILLNMNSEIQIVKNLWSCEYCHEFMKPISKIYEREIIMRDRICFHHFGNGNCSCKDY

Arabidopsis top hitse value%identityAlignment
AT1G08070.1 Tetratricopeptide repeat (TPR)-like superfamily protein7.3e-1659.09Show/hide
Query:  KKLATAVGLILLNMNSEIQIVKNLWSCEYCHEFMKPISKIYEREIIMRDRICFHHFGNGNCSCKDY
        +KLA A GLI     +++ IVKNL  C  CHE  K ISKIY+REII RDR  FHHF +G CSC DY
Subjt:  KKLATAVGLILLNMNSEIQIVKNLWSCEYCHEFMKPISKIYEREIIMRDRICFHHFGNGNCSCKDY

AT3G56550.1 Pentatricopeptide repeat (PPR) superfamily protein4.8e-1551.52Show/hide
Query:  KKLATAVGLILLNMNSEIQIVKNLWSCEYCHEFMKPISKIYEREIIMRDRICFHHFGNGNCSCKDY
        +KLA A GL+     + ++I KNL  C  CH F K +SK + REII+RDR+ FHHF +G CSC DY
Subjt:  KKLATAVGLILLNMNSEIQIVKNLWSCEYCHEFMKPISKIYEREIIMRDRICFHHFGNGNCSCKDY

AT5G06540.1 Pentatricopeptide repeat (PPR) superfamily protein4.8e-1554.55Show/hide
Query:  KKLATAVGLILLNMNSEIQIVKNLWSCEYCHEFMKPISKIYEREIIMRDRICFHHFGNGNCSCKDY
        +KLA A G++     + I+IVKNL  CE CH   K IS++Y RE+I+RDR  FHHF NG CSC+DY
Subjt:  KKLATAVGLILLNMNSEIQIVKNLWSCEYCHEFMKPISKIYEREIIMRDRICFHHFGNGNCSCKDY

AT5G48910.1 Pentatricopeptide repeat (PPR) superfamily protein7.3e-1656.06Show/hide
Query:  KKLATAVGLILLNMNSEIQIVKNLWSCEYCHEFMKPISKIYEREIIMRDRICFHHFGNGNCSCKDY
        +K+ATA GLI  +    I+IVKNL  CE CH  +K ISK+Y+R+I +RDR  FHHF +G+CSC DY
Subjt:  KKLATAVGLILLNMNSEIQIVKNLWSCEYCHEFMKPISKIYEREIIMRDRICFHHFGNGNCSCKDY

AT5G66520.1 Tetratricopeptide repeat (TPR)-like superfamily protein4.8e-1554.55Show/hide
Query:  KKLATAVGLILLNMNSEIQIVKNLWSCEYCHEFMKPISKIYEREIIMRDRICFHHFGNGNCSCKDY
        +KLA   GLI     + I+I+KNL  C+ CH+  K ISKIY+R+I+MRDR  FHHF +G CSC DY
Subjt:  KKLATAVGLILLNMNSEIQIVKNLWSCEYCHEFMKPISKIYEREIIMRDRICFHHFGNGNCSCKDY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAAAAACTTGCTACTGCTGTTGGACTGATCCTATTAAACATGAATTCTGAAATTCAAATTGTTAAGAATTTATGGTCCTGCGAGTACTGCCATGAGTTTATGAAACCGAT
CTCAAAGATTTACGAAAGGGAGATCATAATGAGGGATAGAATCTGCTTCCACCATTTCGGGAATGGCAACTGCTCTTGCAAGGACTAT
mRNA sequenceShow/hide mRNA sequence
AAAAAACTTGCTACTGCTGTTGGACTGATCCTATTAAACATGAATTCTGAAATTCAAATTGTTAAGAATTTATGGTCCTGCGAGTACTGCCATGAGTTTATGAAACCGAT
CTCAAAGATTTACGAAAGGGAGATCATAATGAGGGATAGAATCTGCTTCCACCATTTCGGGAATGGCAACTGCTCTTGCAAGGACTAT
Protein sequenceShow/hide protein sequence
KKLATAVGLILLNMNSEIQIVKNLWSCEYCHEFMKPISKIYEREIIMRDRICFHHFGNGNCSCKDY