; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC02g0957 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC02g0957
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionATP-dependent Clp protease proteolytic subunit
Genome locationMC02:7658313..7661878
RNA-Seq ExpressionMC02g0957
SyntenyMC02g0957
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0009526 - plastid envelope (cellular component)
GO:0009570 - chloroplast stroma (cellular component)
GO:0004176 - ATP-dependent peptidase activity (molecular function)
GO:0004252 - serine-type endopeptidase activity (molecular function)
InterPro domainsIPR001907 - ATP-dependent Clp protease proteolytic subunit
IPR023562 - Clp protease proteolytic subunit /Translocation-enhancing protein TepA
IPR029045 - ClpP/crotonase-like domain superfamily
IPR033135 - ClpP, histidine active site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605088.1 ATP-dependent Clp protease proteolytic subunit 6, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]2.52e-14391.96Show/hide
Query:  GLSSKSIRAPLSLDDKDFLHASTSYRPIEAKKGNPPIMPAVMTPGGPLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGS
        GLSSK++ APL+LD+ DFLH STSY PI AKKGNPPIMPAVMTPGGPL+LSSVLFRNRIIFIGQP+NS VAQRVISQLVTLATIDE++DILVYLNCPGGS
Subjt:  GLSSKSIRAPLSLDDKDFLHASTSYRPIEAKKGNPPIMPAVMTPGGPLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGS

Query:  TYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMFSAFTGQPLEKVQQYTE
        TYS+LAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVD M++AFTGQPLEKVQQYTE
Subjt:  TYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMFSAFTGQPLEKVQQYTE

Query:  RDRFLSVSEALEFGLIDGVLETEY
        RDRFLSVSEALEFGLIDGVLETEY
Subjt:  RDRFLSVSEALEFGLIDGVLETEY

XP_008457934.1 PREDICTED: ATP-dependent Clp protease proteolytic subunit 6, chloroplastic isoform X1 [Cucumis melo]1.93e-14593.75Show/hide
Query:  GLSSKSIRAPLSLDDKDFLHASTSYRPIEAKKGNPPIMPAVMTPGGPLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGS
        GLSSK+  APL+LDDKDFL  STSY PIEA+KGNPPIMPAVMTPGGPLDLSSVLFRNRIIFIGQPVNS VAQRVISQLVTLATIDEDADILVYLNCPGGS
Subjt:  GLSSKSIRAPLSLDDKDFLHASTSYRPIEAKKGNPPIMPAVMTPGGPLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGS

Query:  TYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMFSAFTGQPLEKVQQYTE
        TYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVD M++AFTGQ +EKVQQYTE
Subjt:  TYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMFSAFTGQPLEKVQQYTE

Query:  RDRFLSVSEALEFGLIDGVLETEY
        RDRFLSVSEALEFGLIDGVLETEY
Subjt:  RDRFLSVSEALEFGLIDGVLETEY

XP_022148642.1 ATP-dependent Clp protease proteolytic subunit 6, chloroplastic [Momordica charantia]1.99e-156100Show/hide
Query:  GLSSKSIRAPLSLDDKDFLHASTSYRPIEAKKGNPPIMPAVMTPGGPLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGS
        GLSSKSIRAPLSLDDKDFLHASTSYRPIEAKKGNPPIMPAVMTPGGPLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGS
Subjt:  GLSSKSIRAPLSLDDKDFLHASTSYRPIEAKKGNPPIMPAVMTPGGPLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGS

Query:  TYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMFSAFTGQPLEKVQQYTE
        TYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMFSAFTGQPLEKVQQYTE
Subjt:  TYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMFSAFTGQPLEKVQQYTE

Query:  RDRFLSVSEALEFGLIDGVLETEY
        RDRFLSVSEALEFGLIDGVLETEY
Subjt:  RDRFLSVSEALEFGLIDGVLETEY

XP_022948075.1 ATP-dependent Clp protease proteolytic subunit 6, chloroplastic [Cucurbita moschata]2.52e-14391.96Show/hide
Query:  GLSSKSIRAPLSLDDKDFLHASTSYRPIEAKKGNPPIMPAVMTPGGPLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGS
        GLSSK++ APL+LD+ DFLH STSY PI AKKGNPPIMPAVMTPGGPL+LSSVLFRNRIIFIGQP+NS VAQRVISQLVTLATIDE++DILVYLNCPGGS
Subjt:  GLSSKSIRAPLSLDDKDFLHASTSYRPIEAKKGNPPIMPAVMTPGGPLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGS

Query:  TYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMFSAFTGQPLEKVQQYTE
        TYS+LAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVD M++AFTGQPLEKVQQYTE
Subjt:  TYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMFSAFTGQPLEKVQQYTE

Query:  RDRFLSVSEALEFGLIDGVLETEY
        RDRFLSVSEALEFGLIDGVLETEY
Subjt:  RDRFLSVSEALEFGLIDGVLETEY

XP_038902836.1 ATP-dependent Clp protease proteolytic subunit 6, chloroplastic isoform X1 [Benincasa hispida]6.03e-14994.2Show/hide
Query:  GLSSKSIRAPLSLDDKDFLHASTSYRPIEAKKGNPPIMPAVMTPGGPLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGS
        GLSSK++  PL +DDKDFLH STSY PIEA+KGNPPIMPAVMTPGGPLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGS
Subjt:  GLSSKSIRAPLSLDDKDFLHASTSYRPIEAKKGNPPIMPAVMTPGGPLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGS

Query:  TYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMFSAFTGQPLEKVQQYTE
        TYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHK+DKM++AFTGQP+EKVQQYTE
Subjt:  TYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMFSAFTGQPLEKVQQYTE

Query:  RDRFLSVSEALEFGLIDGVLETEY
        RDRFLSVSEALEFGLIDGVLETEY
Subjt:  RDRFLSVSEALEFGLIDGVLETEY

TrEMBL top hitse value%identityAlignment
A0A1S3C7Y1 ATP-dependent Clp protease proteolytic subunit9.32e-14693.75Show/hide
Query:  GLSSKSIRAPLSLDDKDFLHASTSYRPIEAKKGNPPIMPAVMTPGGPLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGS
        GLSSK+  APL+LDDKDFL  STSY PIEA+KGNPPIMPAVMTPGGPLDLSSVLFRNRIIFIGQPVNS VAQRVISQLVTLATIDEDADILVYLNCPGGS
Subjt:  GLSSKSIRAPLSLDDKDFLHASTSYRPIEAKKGNPPIMPAVMTPGGPLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGS

Query:  TYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMFSAFTGQPLEKVQQYTE
        TYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVD M++AFTGQ +EKVQQYTE
Subjt:  TYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMFSAFTGQPLEKVQQYTE

Query:  RDRFLSVSEALEFGLIDGVLETEY
        RDRFLSVSEALEFGLIDGVLETEY
Subjt:  RDRFLSVSEALEFGLIDGVLETEY

A0A371GGV6 ATP-dependent Clp protease proteolytic subunit (Fragment)1.44e-14191.07Show/hide
Query:  GLSSKSIRAPLSLDDKDFLHASTSYRPIEAKKGNPPIMPAVMTPGGPLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGS
        GLSSKS   PL LD+K+   ASTSY  IEAKKGNPPI PAVMTPGGPLDLSSVLFRNRIIFIGQP+NS VAQRVISQLVTLATIDE+ADILVY+NCPGGS
Subjt:  GLSSKSIRAPLSLDDKDFLHASTSYRPIEAKKGNPPIMPAVMTPGGPLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGS

Query:  TYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMFSAFTGQPLEKVQQYTE
        TYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRY+MPN+RIMIHQPQSGCGGHVEDVRRQVNEAVQSRHK+DKM+SAFTGQPLEKVQQYTE
Subjt:  TYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMFSAFTGQPLEKVQQYTE

Query:  RDRFLSVSEALEFGLIDGVLETEY
        RDRFLSVSEALEFGLIDGVLETEY
Subjt:  RDRFLSVSEALEFGLIDGVLETEY

A0A6J1D5M0 ATP-dependent Clp protease proteolytic subunit9.62e-157100Show/hide
Query:  GLSSKSIRAPLSLDDKDFLHASTSYRPIEAKKGNPPIMPAVMTPGGPLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGS
        GLSSKSIRAPLSLDDKDFLHASTSYRPIEAKKGNPPIMPAVMTPGGPLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGS
Subjt:  GLSSKSIRAPLSLDDKDFLHASTSYRPIEAKKGNPPIMPAVMTPGGPLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGS

Query:  TYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMFSAFTGQPLEKVQQYTE
        TYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMFSAFTGQPLEKVQQYTE
Subjt:  TYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMFSAFTGQPLEKVQQYTE

Query:  RDRFLSVSEALEFGLIDGVLETEY
        RDRFLSVSEALEFGLIDGVLETEY
Subjt:  RDRFLSVSEALEFGLIDGVLETEY

A0A6J1G8P9 ATP-dependent Clp protease proteolytic subunit1.22e-14391.96Show/hide
Query:  GLSSKSIRAPLSLDDKDFLHASTSYRPIEAKKGNPPIMPAVMTPGGPLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGS
        GLSSK++ APL+LD+ DFLH STSY PI AKKGNPPIMPAVMTPGGPL+LSSVLFRNRIIFIGQP+NS VAQRVISQLVTLATIDE++DILVYLNCPGGS
Subjt:  GLSSKSIRAPLSLDDKDFLHASTSYRPIEAKKGNPPIMPAVMTPGGPLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGS

Query:  TYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMFSAFTGQPLEKVQQYTE
        TYS+LAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVD M++AFTGQPLEKVQQYTE
Subjt:  TYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMFSAFTGQPLEKVQQYTE

Query:  RDRFLSVSEALEFGLIDGVLETEY
        RDRFLSVSEALEFGLIDGVLETEY
Subjt:  RDRFLSVSEALEFGLIDGVLETEY

A0A6J1KXP8 ATP-dependent Clp protease proteolytic subunit2.46e-14391.52Show/hide
Query:  GLSSKSIRAPLSLDDKDFLHASTSYRPIEAKKGNPPIMPAVMTPGGPLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGS
        GLSSK++  PL+LD+ DFLH STSY PI AKKGNPPIMPAVMTPGGPL+LSSVLFRNRIIFIGQP+NS VAQRVISQLVTLATIDE++DILVYLNCPGGS
Subjt:  GLSSKSIRAPLSLDDKDFLHASTSYRPIEAKKGNPPIMPAVMTPGGPLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGS

Query:  TYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMFSAFTGQPLEKVQQYTE
        TYS+LAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVD M++AFTGQPLEKVQQYTE
Subjt:  TYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMFSAFTGQPLEKVQQYTE

Query:  RDRFLSVSEALEFGLIDGVLETEY
        RDRFLSVSEALEFGLIDGVLETEY
Subjt:  RDRFLSVSEALEFGLIDGVLETEY

SwissProt top hitse value%identityAlignment
P54415 ATP-dependent Clp protease proteolytic subunit 15.2e-4246.03Show/hide
Query:  IMPAVMTPGG----PLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGAL
        ++P V+   G      D+ S L R RIIF+G+PV S VA R+++QL+ L   D + DI +Y+N PGGS Y  L I+D M+ I+P V TVC G+AAS GA 
Subjt:  IMPAVMTPGG----PLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGAL

Query:  LLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMFSAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLE
        LLA G KG R ++ +SRIMIHQP  G  G  +D+  Q NE +  +  ++++ +  TGQPL +++  T+RD F+S SEA+E+GLID V++
Subjt:  LLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMFSAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLE

Q317Y6 ATP-dependent Clp protease proteolytic subunit 46.8e-4245.81Show/hide
Query:  TSYRPIEAKKGNPPIMPAVMTPGG----PLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKV
        +SY  I    G    +P V+   G      D+ S L R RIIF+G  +N  V+  +++QL+ L   D + DI +Y+N PGGS  + +AIYD M  I P V
Subjt:  TSYRPIEAKKGNPPIMPAVMTPGG----PLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKV

Query:  GTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMFSAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDG
         T+CFGVAAS GA LL+GG KG R A+PNSRIMIHQP  G  G   ++  Q  E +  +  ++ + +  TGQPLEK+ + TERD FLS SEA+E+GLID 
Subjt:  GTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMFSAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDG

Query:  VLE
        V++
Subjt:  VLE

Q59993 ATP-dependent Clp protease proteolytic subunit 26.1e-4345.45Show/hide
Query:  LHASTSYR-PIEAKKGN--PPIMPAVMTPGG----PLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCM
        +++ + YR P+    GN    ++P V+   G      D+ S L R RIIF+G PV+  VA  +++QL+ L   D + DI +Y+N PGGS Y+ LAIYD M
Subjt:  LHASTSYR-PIEAKKGN--PPIMPAVMTPGG----PLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCM

Query:  SWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMFSAFTGQPLEKVQQYTERDRFLSVSEAL
          I+P V T+CFG+AAS GA LL+GG KG R A+P+SRIMIHQP  G  G   ++  Q  E +  + +++ M    TGQP+EK+Q+ TERD F+S  EA 
Subjt:  SWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMFSAFTGQPLEKVQQYTERDRFLSVSEAL

Query:  EFGLIDGVL
        E+GLID V+
Subjt:  EFGLIDGVL

Q5N665 ATP-dependent Clp protease proteolytic subunit 15.2e-4246.03Show/hide
Query:  IMPAVMTPGG----PLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGAL
        ++P V+   G      D+ S L R RIIF+G+PV S VA R+++QL+ L   D + DI +Y+N PGGS Y  L I+D M+ I+P V TVC G+AAS GA 
Subjt:  IMPAVMTPGG----PLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGAL

Query:  LLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMFSAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLE
        LLA G KG R ++ +SRIMIHQP  G  G  +D+  Q NE +  +  ++++ +  TGQPL +++  T+RD F+S SEA+E+GLID V++
Subjt:  LLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMFSAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLE

Q9SAA2 ATP-dependent Clp protease proteolytic subunit 6, chloroplastic2.9e-10180.36Show/hide
Query:  GLSSKSIRAPLSLDDKDFLHASTSYRPIEAKKGNPPIMPAVMTPGGPLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGS
        GLSS    +P+ +D+K     +  +  IEAKKGNPP+MP+VMTPGGPLDLSSVLFRNRIIFIGQP+N+ VAQRVISQLVTLA+ID+ +DIL+YLNCPGGS
Subjt:  GLSSKSIRAPLSLDDKDFLHASTSYRPIEAKKGNPPIMPAVMTPGGPLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGS

Query:  TYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMFSAFTGQPLEKVQQYTE
        TYSVLAIYDCMSWIKPKVGTV FGVAASQGALLLAGGEKGMRYAMPN+R+MIHQPQ+GCGGHVEDVRRQVNEA+++R K+D+M++AFTGQPLEKVQQYTE
Subjt:  TYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMFSAFTGQPLEKVQQYTE

Query:  RDRFLSVSEALEFGLIDGVLETEY
        RDRFLS SEALEFGLIDG+LETEY
Subjt:  RDRFLSVSEALEFGLIDGVLETEY

Arabidopsis top hitse value%identityAlignment
AT1G02560.1 nuclear encoded CLP protease 54.2e-3944.22Show/hide
Query:  STSYRPIEAKKGNPPIMPAVMTPGGPLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTV
        S+ Y P  A+   PP M           + S LF+ RII  G  V+  +A  +++QL+ L  +D   DI++Y+N PGGS  + +AI+D M  I+P V TV
Subjt:  STSYRPIEAKKGNPPIMPAVMTPGGPLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTV

Query:  CFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMFSAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVL
        C G+AAS GA LL+ G KG RY++PNSRIMIHQP  G  G   D+  Q NE +  +  ++   +  TGQ LEK+ Q T+RD F+S  EA E+GLIDGV+
Subjt:  CFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMFSAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVL

AT1G11750.1 CLP protease proteolytic subunit 62.1e-10280.36Show/hide
Query:  GLSSKSIRAPLSLDDKDFLHASTSYRPIEAKKGNPPIMPAVMTPGGPLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGS
        GLSS    +P+ +D+K     +  +  IEAKKGNPP+MP+VMTPGGPLDLSSVLFRNRIIFIGQP+N+ VAQRVISQLVTLA+ID+ +DIL+YLNCPGGS
Subjt:  GLSSKSIRAPLSLDDKDFLHASTSYRPIEAKKGNPPIMPAVMTPGGPLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGS

Query:  TYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMFSAFTGQPLEKVQQYTE
        TYSVLAIYDCMSWIKPKVGTV FGVAASQGALLLAGGEKGMRYAMPN+R+MIHQPQ+GCGGHVEDVRRQVNEA+++R K+D+M++AFTGQPLEKVQQYTE
Subjt:  TYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMFSAFTGQPLEKVQQYTE

Query:  RDRFLSVSEALEFGLIDGVLETEY
        RDRFLS SEALEFGLIDG+LETEY
Subjt:  RDRFLSVSEALEFGLIDGVLETEY

AT1G11750.2 CLP protease proteolytic subunit 62.7e-10277.64Show/hide
Query:  GLSSKSIRAPLSLDDK----------DFLHASTSY---RPIEAKKGNPPIMPAVMTPGGPLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDED
        GLSS    +P+ +D+K          + L +ST Y     IEAKKGNPP+MP+VMTPGGPLDLSSVLFRNRIIFIGQP+N+ VAQRVISQLVTLA+ID+ 
Subjt:  GLSSKSIRAPLSLDDK----------DFLHASTSY---RPIEAKKGNPPIMPAVMTPGGPLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDED

Query:  ADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMFSAF
        +DIL+YLNCPGGSTYSVLAIYDCMSWIKPKVGTV FGVAASQGALLLAGGEKGMRYAMPN+R+MIHQPQ+GCGGHVEDVRRQVNEA+++R K+D+M++AF
Subjt:  ADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMFSAF

Query:  TGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLETEY
        TGQPLEKVQQYTERDRFLS SEALEFGLIDG+LETEY
Subjt:  TGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLETEY

AT1G66670.1 CLP protease proteolytic subunit 35.0e-4045.4Show/hide
Query:  LDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPN
        LD +++L R RI+F+G  V+ + A  VISQL+ L   D + DI +++N PGGS  + + IYD M   K  V TVC G+AAS GA LLA G KG RY MPN
Subjt:  LDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPN

Query:  SRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMFSAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLE
        S++MIHQP    GG   ++  ++ E +  + K++K+FS  TG+P  +++  T+RD FL+  EA E+GLID V++
Subjt:  SRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMFSAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLE

AT5G45390.1 CLP protease P41.1e-3640.11Show/hide
Query:  GGPLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYA
        G   D+  +L R RI+F+G  ++  VA  ++SQL+ L   D   DI +++N PGGS  + +AIYD +  ++  V T+  G+AAS  +++L  G KG R+A
Subjt:  GGPLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYA

Query:  MPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMFSAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLE
        MPN+RIMIHQP  G  G   DV  Q  E + +++ V  + +  T +  E+V +  +RDR++S  EA+E+GLIDGV++
Subjt:  MPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMFSAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGATTATCTAGTAAATCAATCAGAGCTCCTCTAAGCCTCGACGATAAAGATTTTCTTCACGCCAGTACAAGTTATAGACCTATTGAAGCCAAAAAAGGTAATCCACCAAT
TATGCCTGCAGTGATGACACCGGGAGGGCCTTTGGACCTCTCGTCTGTGTTATTTAGGAATCGTATCATATTTATTGGCCAACCTGTCAACTCCATTGTGGCACAGCGAG
TCATATCACAGCTTGTGACTCTAGCAACCATTGATGAGGATGCAGATATCCTGGTATATCTCAATTGCCCCGGTGGAAGTACATACTCAGTATTAGCAATTTATGATTGT
ATGTCTTGGATAAAGCCTAAGGTCGGCACAGTGTGCTTTGGAGTTGCTGCAAGCCAAGGGGCTCTTCTCCTTGCAGGTGGAGAAAAGGGAATGCGCTATGCTATGCCGAA
TTCTCGAATTATGATTCATCAGCCACAGAGTGGATGTGGGGGTCACGTGGAAGATGTTAGACGGCAAGTCAATGAAGCAGTTCAATCACGCCATAAAGTTGACAAGATGT
TCTCTGCATTTACCGGACAACCTCTTGAGAAAGTACAACAATACACCGAAAGAGATCGATTTTTGTCTGTTTCTGAGGCTCTGGAATTTGGGCTCATCGACGGTGTGCTC
GAGACAGAATACTGA
mRNA sequenceShow/hide mRNA sequence
GGATTATCTAGTAAATCAATCAGAGCTCCTCTAAGCCTCGACGATAAAGATTTTCTTCACGCCAGTACAAGTTATAGACCTATTGAAGCCAAAAAAGGTAATCCACCAAT
TATGCCTGCAGTGATGACACCGGGAGGGCCTTTGGACCTCTCGTCTGTGTTATTTAGGAATCGTATCATATTTATTGGCCAACCTGTCAACTCCATTGTGGCACAGCGAG
TCATATCACAGCTTGTGACTCTAGCAACCATTGATGAGGATGCAGATATCCTGGTATATCTCAATTGCCCCGGTGGAAGTACATACTCAGTATTAGCAATTTATGATTGT
ATGTCTTGGATAAAGCCTAAGGTCGGCACAGTGTGCTTTGGAGTTGCTGCAAGCCAAGGGGCTCTTCTCCTTGCAGGTGGAGAAAAGGGAATGCGCTATGCTATGCCGAA
TTCTCGAATTATGATTCATCAGCCACAGAGTGGATGTGGGGGTCACGTGGAAGATGTTAGACGGCAAGTCAATGAAGCAGTTCAATCACGCCATAAAGTTGACAAGATGT
TCTCTGCATTTACCGGACAACCTCTTGAGAAAGTACAACAATACACCGAAAGAGATCGATTTTTGTCTGTTTCTGAGGCTCTGGAATTTGGGCTCATCGACGGTGTGCTC
GAGACAGAATACTGAACACGGATTTGGTGAAGACCGATCATTCATCAGCCATATATGCAAATTACAATGATTTGATTATGCAGAGTGTGACTTTCAAATGGGGAAATCCA
TTCATCTGCCAAATCATCTAAACCAAGCTTTGATACAGAACATCCAAAATTTGAATCAAAATTTACAGCGCTGCATCGTGTCATTGGTAACCTTTCAAATTCTTCGAATT
AACGCACACGAGCTAGTACATGAAAACGCAGTGCTATGATTCTTAATCTTTGCAGCTGAATCAACATTTTATCTCATTCTTGTCAAAATTCCTCATCTTGAAACTGTCCT
CTTTGGACTGCCACCTCGCCCA
Protein sequenceShow/hide protein sequence
GLSSKSIRAPLSLDDKDFLHASTSYRPIEAKKGNPPIMPAVMTPGGPLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDC
MSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMFSAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVL
ETEY