CuGenDBv2

Gene ID	MC02g0958
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	mediator of RNA polymerase II transcription subunit 32
Genome location	MC02:7665251..7666205
RNA-Seq Expression	MC02g0958
Synteny	MC02g0958
Gene Ontology terms	GO:0006355 - regulation of transcription, DNA-templated (biological process) GO:0009631 - cold acclimation (biological process) GO:0010150 - leaf senescence (biological process) GO:0048364 - root development (biological process) GO:0016592 - mediator complex (cellular component)
InterPro domains	IPR033244 - Mediator of RNA polymerase II transcription subunit 32

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0045925.1 mediator of RNA polymerase II transcription subunit 32 [Cucumis melo var. makuwa]

1.95e-85

93.88

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Query:  MDSLVDSLNNAYQEFVAGAANVLEANESSGAQKTAATDAALENFKQKWELFRVACDQAEEFVESVKQRIGSECLVDEATGSLTGKSGQPAAATGLPPISA
        MDSLVDSLNNAYQEFVAGAANVLEANE+SGAQKTAATDAALENFKQKWELFRVACDQAEEFVESVKQRIGSECLVDEATGSL GKSGQ +  TGLPPISA
Subjt:  MDSLVDSLNNAYQEFVAGAANVLEANESSGAQKTAATDAALENFKQKWELFRVACDQAEEFVESVKQRIGSECLVDEATGSLTGKSGQPAAATGLPPISA

Query:  VRLEQMSKAVRWLVIELQQGSGAAASASAHSHPSAPFDARFTEDAAQ
        VRLEQMSKAVRWLVIELQ GSGAAASASAHSH SAPFDARFTEDA Q
Subjt:  VRLEQMSKAVRWLVIELQQGSGAAASASAHSHPSAPFDARFTEDAAQ

XP_004148855.1 mediator of RNA polymerase II transcription subunit 32 [Cucumis sativus]

3.43e-85

93.88

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Query:  MDSLVDSLNNAYQEFVAGAANVLEANESSGAQKTAATDAALENFKQKWELFRVACDQAEEFVESVKQRIGSECLVDEATGSLTGKSGQPAAATGLPPISA
        MDSLVDSLNNAYQEFVAGAANVLEANE+SGAQKTAATDAALENFKQKWELFRVACDQAEEFVESVKQRIGSECLVDEATGSL GKSGQ +A T LPPISA
Subjt:  MDSLVDSLNNAYQEFVAGAANVLEANESSGAQKTAATDAALENFKQKWELFRVACDQAEEFVESVKQRIGSECLVDEATGSLTGKSGQPAAATGLPPISA

Query:  VRLEQMSKAVRWLVIELQQGSGAAASASAHSHPSAPFDARFTEDAAQ
        VRLEQMSKAVRWLVIELQ GSGAAASASAHSH SAPFDARFTEDA Q
Subjt:  VRLEQMSKAVRWLVIELQQGSGAAASASAHSHPSAPFDARFTEDAAQ

XP_022148505.1 mediator of RNA polymerase II transcription subunit 32 [Momordica charantia]

7.22e-94

100

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Query:  MDSLVDSLNNAYQEFVAGAANVLEANESSGAQKTAATDAALENFKQKWELFRVACDQAEEFVESVKQRIGSECLVDEATGSLTGKSGQPAAATGLPPISA
        MDSLVDSLNNAYQEFVAGAANVLEANESSGAQKTAATDAALENFKQKWELFRVACDQAEEFVESVKQRIGSECLVDEATGSLTGKSGQPAAATGLPPISA
Subjt:  MDSLVDSLNNAYQEFVAGAANVLEANESSGAQKTAATDAALENFKQKWELFRVACDQAEEFVESVKQRIGSECLVDEATGSLTGKSGQPAAATGLPPISA

Query:  VRLEQMSKAVRWLVIELQQGSGAAASASAHSHPSAPFDARFTEDAAQ
        VRLEQMSKAVRWLVIELQQGSGAAASASAHSHPSAPFDARFTEDAAQ
Subjt:  VRLEQMSKAVRWLVIELQQGSGAAASASAHSHPSAPFDARFTEDAAQ

XP_022986622.1 mediator of RNA polymerase II transcription subunit 32-like isoform X2 [Cucurbita maxima]

3.80e-85

93.29

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Query:  MDSLVDSLNNAYQEFVAGAANVLEANESSGAQKTAATDAALENFKQKWELFRVACDQAEEFVESVKQRIGSECLVDEATGSLTGKSGQPAAAT-GLPPIS
        MDSLVDSLNNAYQEFV+GAANVLEANE+SGAQKTAATDAALENFKQKWELFRVACDQAEEFVESVKQRIGSECLVDEATGSL GKSGQ AA T GLPPIS
Subjt:  MDSLVDSLNNAYQEFVAGAANVLEANESSGAQKTAATDAALENFKQKWELFRVACDQAEEFVESVKQRIGSECLVDEATGSLTGKSGQPAAAT-GLPPIS

Query:  AVRLEQMSKAVRWLVIELQQGSGAAA-SASAHSHPSAPFDARFTEDAAQ
        A+RLEQMSKAVRWLVIELQ GSGAAA SASAHSHPSAPFDARFTEDA Q
Subjt:  AVRLEQMSKAVRWLVIELQQGSGAAA-SASAHSHPSAPFDARFTEDAAQ

XP_038902813.1 mediator of RNA polymerase II transcription subunit 32 [Benincasa hispida]

2.94e-86

94.56

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Query:  MDSLVDSLNNAYQEFVAGAANVLEANESSGAQKTAATDAALENFKQKWELFRVACDQAEEFVESVKQRIGSECLVDEATGSLTGKSGQPAAATGLPPISA
        MDSLVDSLNNAYQEFVAGAANVLEANE+SGAQKTAATDAALENFKQKWELFRVACDQAEEFVESVKQRIGSECLVDEATGSL GKSGQ AA TG+PPISA
Subjt:  MDSLVDSLNNAYQEFVAGAANVLEANESSGAQKTAATDAALENFKQKWELFRVACDQAEEFVESVKQRIGSECLVDEATGSLTGKSGQPAAATGLPPISA

Query:  VRLEQMSKAVRWLVIELQQGSGAAASASAHSHPSAPFDARFTEDAAQ
        VRLEQMSKAVRWLVIELQ GSGAAASASAHSH SAPFDARFTEDA Q
Subjt:  VRLEQMSKAVRWLVIELQQGSGAAASASAHSHPSAPFDARFTEDAAQ

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LIN7 Uncharacterized protein

1.66e-85

93.88

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Query:  MDSLVDSLNNAYQEFVAGAANVLEANESSGAQKTAATDAALENFKQKWELFRVACDQAEEFVESVKQRIGSECLVDEATGSLTGKSGQPAAATGLPPISA
        MDSLVDSLNNAYQEFVAGAANVLEANE+SGAQKTAATDAALENFKQKWELFRVACDQAEEFVESVKQRIGSECLVDEATGSL GKSGQ +A T LPPISA
Subjt:  MDSLVDSLNNAYQEFVAGAANVLEANESSGAQKTAATDAALENFKQKWELFRVACDQAEEFVESVKQRIGSECLVDEATGSLTGKSGQPAAATGLPPISA

Query:  VRLEQMSKAVRWLVIELQQGSGAAASASAHSHPSAPFDARFTEDAAQ
        VRLEQMSKAVRWLVIELQ GSGAAASASAHSH SAPFDARFTEDA Q
Subjt:  VRLEQMSKAVRWLVIELQQGSGAAASASAHSHPSAPFDARFTEDAAQ

A0A5A7TWZ7 Mediator of RNA polymerase II transcription subunit 32

9.42e-86

93.88

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Query:  MDSLVDSLNNAYQEFVAGAANVLEANESSGAQKTAATDAALENFKQKWELFRVACDQAEEFVESVKQRIGSECLVDEATGSLTGKSGQPAAATGLPPISA
        MDSLVDSLNNAYQEFVAGAANVLEANE+SGAQKTAATDAALENFKQKWELFRVACDQAEEFVESVKQRIGSECLVDEATGSL GKSGQ +  TGLPPISA
Subjt:  MDSLVDSLNNAYQEFVAGAANVLEANESSGAQKTAATDAALENFKQKWELFRVACDQAEEFVESVKQRIGSECLVDEATGSLTGKSGQPAAATGLPPISA

Query:  VRLEQMSKAVRWLVIELQQGSGAAASASAHSHPSAPFDARFTEDAAQ
        VRLEQMSKAVRWLVIELQ GSGAAASASAHSH SAPFDARFTEDA Q
Subjt:  VRLEQMSKAVRWLVIELQQGSGAAASASAHSHPSAPFDARFTEDAAQ

A0A6J1D330 mediator of RNA polymerase II transcription subunit 32

3.50e-94

100

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Query:  MDSLVDSLNNAYQEFVAGAANVLEANESSGAQKTAATDAALENFKQKWELFRVACDQAEEFVESVKQRIGSECLVDEATGSLTGKSGQPAAATGLPPISA
        MDSLVDSLNNAYQEFVAGAANVLEANESSGAQKTAATDAALENFKQKWELFRVACDQAEEFVESVKQRIGSECLVDEATGSLTGKSGQPAAATGLPPISA
Subjt:  MDSLVDSLNNAYQEFVAGAANVLEANESSGAQKTAATDAALENFKQKWELFRVACDQAEEFVESVKQRIGSECLVDEATGSLTGKSGQPAAATGLPPISA

Query:  VRLEQMSKAVRWLVIELQQGSGAAASASAHSHPSAPFDARFTEDAAQ
        VRLEQMSKAVRWLVIELQQGSGAAASASAHSHPSAPFDARFTEDAAQ
Subjt:  VRLEQMSKAVRWLVIELQQGSGAAASASAHSHPSAPFDARFTEDAAQ

A0A6J1FUB1 mediator of RNA polymerase II transcription subunit 32-like

2.79e-85

92.72

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Query:  MDSLVDSLNNAYQEFVAGAANVLEANESSGAQKTAATDAALENFKQKWELFRVACDQAEEFVESVKQRIGSECLVDEATGSLTGKSGQPAAAT-GLPPIS
        MDSLVDSLNNAYQEFV+GAANVLEANE+SGAQKTAATDAALENFKQKWELFRVACDQAEEFVESVKQRIGSECLVDEATGSL GKSGQ AA T GLPPIS
Subjt:  MDSLVDSLNNAYQEFVAGAANVLEANESSGAQKTAATDAALENFKQKWELFRVACDQAEEFVESVKQRIGSECLVDEATGSLTGKSGQPAAAT-GLPPIS

Query:  AVRLEQMSKAVRWLVIELQQGSGAAA---SASAHSHPSAPFDARFTEDAAQ
        AVRLEQMSKAVRWLVIELQ GSGAAA   SASAHSHPSAPFDARFTEDA Q
Subjt:  AVRLEQMSKAVRWLVIELQQGSGAAA---SASAHSHPSAPFDARFTEDAAQ

A0A6J1JH28 mediator of RNA polymerase II transcription subunit 32-like isoform X2

1.84e-85

93.29

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Query:  MDSLVDSLNNAYQEFVAGAANVLEANESSGAQKTAATDAALENFKQKWELFRVACDQAEEFVESVKQRIGSECLVDEATGSLTGKSGQPAAAT-GLPPIS
        MDSLVDSLNNAYQEFV+GAANVLEANE+SGAQKTAATDAALENFKQKWELFRVACDQAEEFVESVKQRIGSECLVDEATGSL GKSGQ AA T GLPPIS
Subjt:  MDSLVDSLNNAYQEFVAGAANVLEANESSGAQKTAATDAALENFKQKWELFRVACDQAEEFVESVKQRIGSECLVDEATGSLTGKSGQPAAAT-GLPPIS

Query:  AVRLEQMSKAVRWLVIELQQGSGAAA-SASAHSHPSAPFDARFTEDAAQ
        A+RLEQMSKAVRWLVIELQ GSGAAA SASAHSHPSAPFDARFTEDA Q
Subjt:  AVRLEQMSKAVRWLVIELQQGSGAAA-SASAHSHPSAPFDARFTEDAAQ

SwissProt top hits

e value

%identity

Alignment

Q84VW5 Mediator of RNA polymerase II transcription subunit 32

3.0e-46

68.63

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Query:  MDSLVDSLNNAYQEFVAGAANVLEANESSGAQKTAATDAALENFKQKWELFRVACDQAEEFVESVKQRIGSECLVDEATGSLTGKSGQPA------AATG
        MD++VDSLN AY++FV  +A VLE+ ES+G QK   TD ALENFK+KWELFRVACDQAEEFVESVKQRIGSECLVDEATG  T  +G  A      AAT 
Subjt:  MDSLVDSLNNAYQEFVAGAANVLEANESSGAQKTAATDAALENFKQKWELFRVACDQAEEFVESVKQRIGSECLVDEATGSLTGKSGQPA------AATG

Query:  LPPISAVRLEQMSKAVRWLVIELQQGSGAAASASAHSHPSAPFDARFTEDAAQ
        LPPISAVRLEQMS+AVRWLV+ELQ+GSG  A  S HS  S  FD+RF+ED+ Q
Subjt:  LPPISAVRLEQMSKAVRWLVIELQQGSGAAASASAHSHPSAPFDARFTEDAAQ

Arabidopsis top hits

e value

%identity

Alignment

AT1G11760.1 MED32; Has 41 Blast hits to 40 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

2.1e-47

68.63

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Query:  MDSLVDSLNNAYQEFVAGAANVLEANESSGAQKTAATDAALENFKQKWELFRVACDQAEEFVESVKQRIGSECLVDEATGSLTGKSGQPA------AATG
        MD++VDSLN AY++FV  +A VLE+ ES+G QK   TD ALENFK+KWELFRVACDQAEEFVESVKQRIGSECLVDEATG  T  +G  A      AAT 
Subjt:  MDSLVDSLNNAYQEFVAGAANVLEANESSGAQKTAATDAALENFKQKWELFRVACDQAEEFVESVKQRIGSECLVDEATGSLTGKSGQPA------AATG

Query:  LPPISAVRLEQMSKAVRWLVIELQQGSGAAASASAHSHPSAPFDARFTEDAAQ
        LPPISAVRLEQMS+AVRWLV+ELQ+GSG  A  S HS  S  FD+RF+ED+ Q
Subjt:  LPPISAVRLEQMSKAVRWLVIELQQGSGAAASASAHSHPSAPFDARFTEDAAQ

Sequences

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CDS sequence

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mRNA sequence

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ATGGACAGCTTAGTGGACTCTTTAAATAACGCGTACCAGGAGTTTGTTGCTGGGGCAGCCAATGTTCTTGAAGCCAACGAAAGCTCTGGGGCTCAGAAGACAGCAGCAAC
AGATGCCGCTCTTGAGAATTTTAAACAGAAATGGGAGCTATTCAGGGTTGCCTGTGACCAAGCAGAGGAGTTTGTGGAGTCCGTGAAGCAGAGGATAGGATCAGAGTGCC
TGGTGGATGAGGCCACTGGTTCACTGACTGGCAAGTCTGGGCAGCCTGCCGCTGCCACCGGTCTTCCACCGATCAGTGCCGTTCGGCTGGAACAGATGAGCAAAGCTGTG
AGATGGCTTGTGATTGAACTGCAGCAGGGCTCAGGAGCTGCTGCTTCTGCTTCAGCACATTCTCACCCTTCTGCCCCTTTTGATGCTAGATTTACCGAGGATGCAGCCCA
ATAGGTACCTATCTTATAAGGCAAATGGAACAAGTATTCTGTTTTGCATGAAAAATGACTCACGGGGTGGGGCATTTGCTGTGCAAAATAATTGTCTTCAAACCTTGATT
GAATGGAAGAAATGGAAACCATTTCTCCTGTATCTATAGTTAACTAATATACTTTCACGTTCTTGTACTTGTTTGAGTTGTTTTTGTTAAGGGTTGGGTGCAAGTGAAAT
AGTCTCTAATATATATATTTCTTCTCTTCTCCCACAATATATTATAGGACTAGCTGAAATTTCATTGATCGTCGTTGCTCGAAACATTGAGAATATGTTAAACGATGAAA
GTTATCATAAGTTTGTGGATTCATTAGTGTTGTAAAATCTAACCTGTGTTTCTTTACCGGTCATTCTCTTTCTATTTTTTATATATGCCAAATTCAAGCCATAACATTGG
TTTCTCATAGAACTCGGATAATGTGGGTCAATGAAAAAAAGGTTAAAAGGGTTGGAGGAATGAGTTCAAGCTTGG

Protein sequence

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MDSLVDSLNNAYQEFVAGAANVLEANESSGAQKTAATDAALENFKQKWELFRVACDQAEEFVESVKQRIGSECLVDEATGSLTGKSGQPAAATGLPPISAVRLEQMSKAV
RWLVIELQQGSGAAASASAHSHPSAPFDARFTEDAAQ

MC02g0958 (gene) of Bitter gourd (Dali-11) v1 genome