CuGenDBv2

Gene ID	MC02g0970
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	ATP-dependent Clp protease proteolytic subunit
Genome location	MC02:7773175..7773312
RNA-Seq Expression	MC02g0970
Synteny	MC02g0970
Gene Ontology terms	GO:0006508 - proteolysis (biological process) GO:0009526 - plastid envelope (cellular component) GO:0009570 - chloroplast stroma (cellular component) GO:0004176 - ATP-dependent peptidase activity (molecular function) GO:0004252 - serine-type endopeptidase activity (molecular function)
InterPro domains	IPR023562 - Clp protease proteolytic subunit /Translocation-enhancing protein TepA IPR029045 - ClpP/crotonase-like domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAF4348561.1 hypothetical protein F8388_000240 [Cannabis sativa]

1.28e-20

97.78

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Query:  INRLYRERLLFLGQEVDSQISNQLIGLMVYLSIEDDTKDLYLFIN
        INRLYRERLLFLGQEVDS+ISNQLIGLMVYLSIEDDTKDLYLFIN
Subjt:  INRLYRERLLFLGQEVDSQISNQLIGLMVYLSIEDDTKDLYLFIN

NWD34190.1 ATP-dependent Clp protease proteolytic subunit [Pseudomonas reactans]

4.33e-21

95.65

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Query:  LINRLYRERLLFLGQEVDSQISNQLIGLMVYLSIEDDTKDLYLFIN
        LINRLYRERLLFLGQEVDS+ISNQLIGLM+YLSIEDDTKDLYLFIN
Subjt:  LINRLYRERLLFLGQEVDSQISNQLIGLMVYLSIEDDTKDLYLFIN

RXV70727.1 ATP-dependent Clp protease proteolytic subunit [bacterium 1XD8-92]

7.08e-21

97.83

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Query:  LINRLYRERLLFLGQEVDSQISNQLIGLMVYLSIEDDTKDLYLFIN
        LINRLYRERLLFLGQEVDS+ISNQLIGLMVYLSIEDDTKDLYLFIN
Subjt:  LINRLYRERLLFLGQEVDSQISNQLIGLMVYLSIEDDTKDLYLFIN

TAI92804.1 ATP-dependent Clp protease proteolytic subunit, partial [Marinilabiliaceae bacterium JC017]

1.51e-21

97.83

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Query:  LINRLYRERLLFLGQEVDSQISNQLIGLMVYLSIEDDTKDLYLFIN
        LINRLYRERLLFLGQEVDS+ISNQLIGLMVYLSIEDDTKDLYLFIN
Subjt:  LINRLYRERLLFLGQEVDSQISNQLIGLMVYLSIEDDTKDLYLFIN

YP_009924569.1 caseinolytic mitochondrial matrix peptidase proteolytic subunit [Styrax dasyanthus]

6.36e-21

97.83

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Query:  LINRLYRERLLFLGQEVDSQISNQLIGLMVYLSIEDDTKDLYLFIN
        LINRLYRERLLFLGQEVDS+ISNQLIGLMVYLSIEDDTKDLYLFIN
Subjt:  LINRLYRERLLFLGQEVDSQISNQLIGLMVYLSIEDDTKDLYLFIN

TrEMBL top hits

e value

%identity

Alignment

A0A4Q2AMQ5 ATP-dependent Clp protease proteolytic subunit

3.43e-21

97.83

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Query:  LINRLYRERLLFLGQEVDSQISNQLIGLMVYLSIEDDTKDLYLFIN
        LINRLYRERLLFLGQEVDS+ISNQLIGLMVYLSIEDDTKDLYLFIN
Subjt:  LINRLYRERLLFLGQEVDSQISNQLIGLMVYLSIEDDTKDLYLFIN

A0A4Q8RL26 ATP-dependent Clp protease proteolytic subunit (Fragment)

7.30e-22

97.83

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Query:  LINRLYRERLLFLGQEVDSQISNQLIGLMVYLSIEDDTKDLYLFIN
        LINRLYRERLLFLGQEVDS+ISNQLIGLMVYLSIEDDTKDLYLFIN
Subjt:  LINRLYRERLLFLGQEVDSQISNQLIGLMVYLSIEDDTKDLYLFIN

A0A7G7WP61 ATP-dependent Clp protease proteolytic subunit

3.08e-21

97.83

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Query:  LINRLYRERLLFLGQEVDSQISNQLIGLMVYLSIEDDTKDLYLFIN
        LINRLYRERLLFLGQEVDS+ISNQLIGLMVYLSIEDDTKDLYLFIN
Subjt:  LINRLYRERLLFLGQEVDSQISNQLIGLMVYLSIEDDTKDLYLFIN

A0A7J6DR23 ATP-dependent Clp protease proteolytic subunit

6.20e-21

97.78

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Query:  INRLYRERLLFLGQEVDSQISNQLIGLMVYLSIEDDTKDLYLFIN
        INRLYRERLLFLGQEVDS+ISNQLIGLMVYLSIEDDTKDLYLFIN
Subjt:  INRLYRERLLFLGQEVDSQISNQLIGLMVYLSIEDDTKDLYLFIN

A0A7M3US92 ATP-dependent Clp protease proteolytic subunit

9.94e-21

95.65

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Query:  LINRLYRERLLFLGQEVDSQISNQLIGLMVYLSIEDDTKDLYLFIN
        LINRLYRERLLFLGQEVDS++SNQLIGLMVYLSIEDDTKDLYLFIN
Subjt:  LINRLYRERLLFLGQEVDSQISNQLIGLMVYLSIEDDTKDLYLFIN

SwissProt top hits

e value

%identity

Alignment

Q09FT6 ATP-dependent Clp protease proteolytic subunit

3.8e-16

95.45

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Query:  NRLYRERLLFLGQEVDSQISNQLIGLMVYLSIEDDTKDLYLFIN
        NRLYRERLLFLGQEVDS+ISNQLIGLMVYLSIED+TKDLYLFIN
Subjt:  NRLYRERLLFLGQEVDSQISNQLIGLMVYLSIEDDTKDLYLFIN

Q09WZ2 ATP-dependent Clp protease proteolytic subunit

1.3e-16

93.48

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Query:  LINRLYRERLLFLGQEVDSQISNQLIGLMVYLSIEDDTKDLYLFIN
        +INRLYRERLLFLGQEVDS+ISNQLIGLMV+LSIEDDTKDLYLFIN
Subjt:  LINRLYRERLLFLGQEVDSQISNQLIGLMVYLSIEDDTKDLYLFIN

Q0G9J4 ATP-dependent Clp protease proteolytic subunit

3.8e-16

89.13

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Query:  LINRLYRERLLFLGQEVDSQISNQLIGLMVYLSIEDDTKDLYLFIN
        + NRLYRERLLFLGQEVDS+ISNQL+GLMVYLSIEDDT+DLYLFIN
Subjt:  LINRLYRERLLFLGQEVDSQISNQLIGLMVYLSIEDDTKDLYLFIN

Q332V2 ATP-dependent Clp protease proteolytic subunit

1.7e-16

91.3

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Query:  LINRLYRERLLFLGQEVDSQISNQLIGLMVYLSIEDDTKDLYLFIN
        + NRLYRERLLFLGQEVDS+ISNQLIGLM+YLSIEDDTKDLYLFIN
Subjt:  LINRLYRERLLFLGQEVDSQISNQLIGLMVYLSIEDDTKDLYLFIN

Q9M3K5 ATP-dependent Clp protease proteolytic subunit

1.3e-16

97.73

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Query:  NRLYRERLLFLGQEVDSQISNQLIGLMVYLSIEDDTKDLYLFIN
        NRLYRERLLFLGQEVDS+ISNQLIGLMVYLSIEDDTKDLYLFIN
Subjt:  NRLYRERLLFLGQEVDSQISNQLIGLMVYLSIEDDTKDLYLFIN

Arabidopsis top hits

e value

%identity

Alignment

AT1G12410.1 CLP protease proteolytic subunit 2

8.7e-08

45.45

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Query:  NRLYRERLLFLGQEVDSQISNQLIGLMVYLSIEDDTKDLYLFIN
        N LYRER++F+GQ +D + SNQ++  M+YL   DD++ +Y+++N
Subjt:  NRLYRERLLFLGQEVDSQISNQLIGLMVYLSIEDDTKDLYLFIN

AT1G66670.1 CLP protease proteolytic subunit 3

7.7e-04

40.91

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Query:  NRLYRERLLFLGQEVDSQISNQLIGLMVYLSIEDDTKDLYLFIN
        N L R+R++FLG +VD   ++ +I  ++ L  ED  +D+ LFIN
Subjt:  NRLYRERLLFLGQEVDSQISNQLIGLMVYLSIEDDTKDLYLFIN

ATCG00670.1 plastid-encoded CLP P

2.5e-15

82.61

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Query:  LINRLYRERLLFLGQEVDSQISNQLIGLMVYLSIEDDTKDLYLFIN
        + NRLYRERL FLGQEVD++ISNQLI LM+YLSIE DTKDLYLFIN
Subjt:  LINRLYRERLLFLGQEVDSQISNQLIGLMVYLSIEDDTKDLYLFIN

Sequences

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CDS sequence

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CTAATCAACCGACTTTATCGAGAAAGATTACTTTTTTTAGGCCAAGAGGTTGATAGCCAGATCTCGAATCAACTTATTGGTCTTATGGTATATCTCAGTATAGAGGATGA
TACCAAAGATCTGTATTTATTTATAAAT

mRNA sequence

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CTAATCAACCGACTTTATCGAGAAAGATTACTTTTTTTAGGCCAAGAGGTTGATAGCCAGATCTCGAATCAACTTATTGGTCTTATGGTATATCTCAGTATAGAGGATGA
TACCAAAGATCTGTATTTATTTATAAAT

Protein sequence

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LINRLYRERLLFLGQEVDSQISNQLIGLMVYLSIEDDTKDLYLFIN

MC02g0970 (gene) of Bitter gourd (Dali-11) v1 genome