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MC02g1008 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC02g1008
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionNudix hydrolase domain-containing protein
Genome locationMC02:8084402..8085276
RNA-Seq ExpressionMC02g1008
SyntenyMC02g1008
Gene Ontology termsGO:0006203 - dGTP catabolic process (biological process)
GO:0005829 - cytosol (cellular component)
GO:0035539 - 8-oxo-7,8-dihydrodeoxyguanosine triphosphate pyrophosphatase activity (molecular function)
InterPro domainsIPR000086 - NUDIX hydrolase domain
IPR015797 - NUDIX hydrolase-like domain superfamily
IPR020084 - NUDIX hydrolase, conserved site
IPR020476 - NUDIX hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_018817359.1 geranyl diphosphate phosphohydrolase [Juglans regia]3.05e-7273.33Show/hide
Query:  PTVGVAVFLFKGKSVLMGRRRVPHGDSTFAVPGGHLEFGESFEECAARELKEETGLDIEKIEFITATNNLFLDNPSPSHYVVIFMRATLADPDQIARNLE
        P VGVAVFL  GK+VL+GRRR   GDSTFA+PGGHLEFGESFEECAARELKEETGLDI+K+E++T TN LFL+ P PSHYV IFMRA LADP+Q+ +NLE
Subjt:  PTVGVAVFLFKGKSVLMGRRRVPHGDSTFAVPGGHLEFGESFEECAARELKEETGLDIEKIEFITATNNLFLDNPSPSHYVVIFMRATLADPDQIARNLE

Query:  PEKCDGWDWYEWDRLPQPLFSPLLNFVNTGFDPFP
        P+KCDGWDWY+WD LP+PLF PL   V  G++PFP
Subjt:  PEKCDGWDWYEWDRLPQPLFSPLLNFVNTGFDPFP

XP_022148636.1 geranyl diphosphate phosphohydrolase-like [Momordica charantia]1.57e-112100Show/hide
Query:  MDNPPPPPPPTVGVAVFLFKGKSVLMGRRRVPHGDSTFAVPGGHLEFGESFEECAARELKEETGLDIEKIEFITATNNLFLDNPSPSHYVVIFMRATLAD
        MDNPPPPPPPTVGVAVFLFKGKSVLMGRRRVPHGDSTFAVPGGHLEFGESFEECAARELKEETGLDIEKIEFITATNNLFLDNPSPSHYVVIFMRATLAD
Subjt:  MDNPPPPPPPTVGVAVFLFKGKSVLMGRRRVPHGDSTFAVPGGHLEFGESFEECAARELKEETGLDIEKIEFITATNNLFLDNPSPSHYVVIFMRATLAD

Query:  PDQIARNLEPEKCDGWDWYEWDRLPQPLFSPLLNFVNTGFDPFPKCDQNH
        PDQIARNLEPEKCDGWDWYEWDRLPQPLFSPLLNFVNTGFDPFPKCDQNH
Subjt:  PDQIARNLEPEKCDGWDWYEWDRLPQPLFSPLLNFVNTGFDPFPKCDQNH

XP_024196843.1 geranyl diphosphate phosphohydrolase [Rosa chinensis]1.27e-7369.13Show/hide
Query:  MDNPPPPPPPTVGVAVFLFKGKSVLMGRRRVPHGDSTFAVPGGHLEFGESFEECAARELKEETGLDIEKIEFITATNNLFLDNPSPSHYVVIFMRATLAD
        M+N    P P VGV VFL +GK+VL+GRRR   GDSTFA+PGGHLEFGE FEECAARELKEETGLD++KIEF+T TNNLFLD P P+HYV IFMRA L D
Subjt:  MDNPPPPPPPTVGVAVFLFKGKSVLMGRRRVPHGDSTFAVPGGHLEFGESFEECAARELKEETGLDIEKIEFITATNNLFLDNPSPSHYVVIFMRATLAD

Query:  PDQIARNLEPEKCDGWDWYEWDRLPQPLFSPLLNFVNTGFDPFPKCDQN
        PDQ+ + +EP+KCDGW WYEWD LP+PLF PL   V +GF PFP  D N
Subjt:  PDQIARNLEPEKCDGWDWYEWDRLPQPLFSPLLNFVNTGFDPFPKCDQN

XP_041012739.1 nudix hydrolase 1 [Juglans microcarpa x Juglans regia]5.05e-7172.59Show/hide
Query:  PTVGVAVFLFKGKSVLMGRRRVPHGDSTFAVPGGHLEFGESFEECAARELKEETGLDIEKIEFITATNNLFLDNPSPSHYVVIFMRATLADPDQIARNLE
        P VGVAVFL  GK+VL+GRRR   GDSTFA+PGGHLEFGESFEECAARELKEETGLDI+K+E++T TN LFL+ P PSHYV IFMRA L DP+Q  +NLE
Subjt:  PTVGVAVFLFKGKSVLMGRRRVPHGDSTFAVPGGHLEFGESFEECAARELKEETGLDIEKIEFITATNNLFLDNPSPSHYVVIFMRATLADPDQIARNLE

Query:  PEKCDGWDWYEWDRLPQPLFSPLLNFVNTGFDPFP
        P+KCDGWDWY+WD LP+PLF PL   V  G++PFP
Subjt:  PEKCDGWDWYEWDRLPQPLFSPLLNFVNTGFDPFP

XP_042978438.1 geranyl diphosphate phosphohydrolase-like [Carya illinoinensis]1.76e-7172.59Show/hide
Query:  PTVGVAVFLFKGKSVLMGRRRVPHGDSTFAVPGGHLEFGESFEECAARELKEETGLDIEKIEFITATNNLFLDNPSPSHYVVIFMRATLADPDQIARNLE
        P VGVAVFL +GK+VL+GRRR   GDSTFA+PGGHLEFGESFEECAARELKEETGLDI+K+E++T TN LFL+ P PSHYV IFMRA L DP+Q  +NLE
Subjt:  PTVGVAVFLFKGKSVLMGRRRVPHGDSTFAVPGGHLEFGESFEECAARELKEETGLDIEKIEFITATNNLFLDNPSPSHYVVIFMRATLADPDQIARNLE

Query:  PEKCDGWDWYEWDRLPQPLFSPLLNFVNTGFDPFP
        P+KCDGWDWY+WD LP+PLF PL   V  G++PFP
Subjt:  PEKCDGWDWYEWDRLPQPLFSPLLNFVNTGFDPFP

TrEMBL top hitse value%identityAlignment
A0A2I4ED83 geranyl diphosphate phosphohydrolase1.48e-7273.33Show/hide
Query:  PTVGVAVFLFKGKSVLMGRRRVPHGDSTFAVPGGHLEFGESFEECAARELKEETGLDIEKIEFITATNNLFLDNPSPSHYVVIFMRATLADPDQIARNLE
        P VGVAVFL  GK+VL+GRRR   GDSTFA+PGGHLEFGESFEECAARELKEETGLDI+K+E++T TN LFL+ P PSHYV IFMRA LADP+Q+ +NLE
Subjt:  PTVGVAVFLFKGKSVLMGRRRVPHGDSTFAVPGGHLEFGESFEECAARELKEETGLDIEKIEFITATNNLFLDNPSPSHYVVIFMRATLADPDQIARNLE

Query:  PEKCDGWDWYEWDRLPQPLFSPLLNFVNTGFDPFP
        P+KCDGWDWY+WD LP+PLF PL   V  G++PFP
Subjt:  PEKCDGWDWYEWDRLPQPLFSPLLNFVNTGFDPFP

A0A2P6R1Z9 Putative hydrolase6.17e-7469.13Show/hide
Query:  MDNPPPPPPPTVGVAVFLFKGKSVLMGRRRVPHGDSTFAVPGGHLEFGESFEECAARELKEETGLDIEKIEFITATNNLFLDNPSPSHYVVIFMRATLAD
        M+N    P P VGV VFL +GK+VL+GRRR   GDSTFA+PGGHLEFGE FEECAARELKEETGLD++KIEF+T TNNLFLD P P+HYV IFMRA L D
Subjt:  MDNPPPPPPPTVGVAVFLFKGKSVLMGRRRVPHGDSTFAVPGGHLEFGESFEECAARELKEETGLDIEKIEFITATNNLFLDNPSPSHYVVIFMRATLAD

Query:  PDQIARNLEPEKCDGWDWYEWDRLPQPLFSPLLNFVNTGFDPFPKCDQN
        PDQ+ + +EP+KCDGW WYEWD LP+PLF PL   V +GF PFP  D N
Subjt:  PDQIARNLEPEKCDGWDWYEWDRLPQPLFSPLLNFVNTGFDPFPKCDQN

A0A6J1D608 geranyl diphosphate phosphohydrolase-like7.59e-113100Show/hide
Query:  MDNPPPPPPPTVGVAVFLFKGKSVLMGRRRVPHGDSTFAVPGGHLEFGESFEECAARELKEETGLDIEKIEFITATNNLFLDNPSPSHYVVIFMRATLAD
        MDNPPPPPPPTVGVAVFLFKGKSVLMGRRRVPHGDSTFAVPGGHLEFGESFEECAARELKEETGLDIEKIEFITATNNLFLDNPSPSHYVVIFMRATLAD
Subjt:  MDNPPPPPPPTVGVAVFLFKGKSVLMGRRRVPHGDSTFAVPGGHLEFGESFEECAARELKEETGLDIEKIEFITATNNLFLDNPSPSHYVVIFMRATLAD

Query:  PDQIARNLEPEKCDGWDWYEWDRLPQPLFSPLLNFVNTGFDPFPKCDQNH
        PDQIARNLEPEKCDGWDWYEWDRLPQPLFSPLLNFVNTGFDPFPKCDQNH
Subjt:  PDQIARNLEPEKCDGWDWYEWDRLPQPLFSPLLNFVNTGFDPFPKCDQNH

A0A7D5YFN1 Nudix hydrolase 1-36.17e-7469.13Show/hide
Query:  MDNPPPPPPPTVGVAVFLFKGKSVLMGRRRVPHGDSTFAVPGGHLEFGESFEECAARELKEETGLDIEKIEFITATNNLFLDNPSPSHYVVIFMRATLAD
        M+N    P P VGV VFL +GK+VL+GRRR   GDSTFA+PGGHLEFGE FEECAARELKEETGLD++KIEF+T TNNLFLD P P+HYV IFMRA L D
Subjt:  MDNPPPPPPPTVGVAVFLFKGKSVLMGRRRVPHGDSTFAVPGGHLEFGESFEECAARELKEETGLDIEKIEFITATNNLFLDNPSPSHYVVIFMRATLAD

Query:  PDQIARNLEPEKCDGWDWYEWDRLPQPLFSPLLNFVNTGFDPFPKCDQN
        PDQ+ + +EP+KCDGW WYEWD LP+PLF PL   V +GF PFP  D N
Subjt:  PDQIARNLEPEKCDGWDWYEWDRLPQPLFSPLLNFVNTGFDPFPKCDQN

V4TH94 Nudix hydrolase domain-containing protein3.36e-7173.33Show/hide
Query:  PTVGVAVFLFKGKSVLMGRRRVPHGDSTFAVPGGHLEFGESFEECAARELKEETGLDIEKIEFITATNNLFLDNPSPSHYVVIFMRATLADPDQIARNLE
        P VGV VF+ +GKSVL+G+RR   GDST+A+PGGHLEFGESFEECAARELKEETGLDIEKIEF+T TN++FL+NP PSHYVVIF+RA LADP Q  +NLE
Subjt:  PTVGVAVFLFKGKSVLMGRRRVPHGDSTFAVPGGHLEFGESFEECAARELKEETGLDIEKIEFITATNNLFLDNPSPSHYVVIFMRATLADPDQIARNLE

Query:  PEKCDGWDWYEWDRLPQPLFSPLLNFVNTGFDPFP
        P+KC GWDWY+W+ LPQPLF PL   V +GF+PFP
Subjt:  PEKCDGWDWYEWDRLPQPLFSPLLNFVNTGFDPFP

SwissProt top hitse value%identityAlignment
C5BHE7 NAD-capped RNA hydrolase NudC2.1e-0729.2Show/hide
Query:  VAVFLFKGKSVLMGRRRVPHGDSTFAVPGGHLEFGESFEECAARELKEETGLDIEKIEFITATNNLFLDNPSPSHYVVIFMRATLADPDQIARNLEPEKC
        + V + +   +L+ R    H +  + V  G +E GE+ E+ AARE+ EE+ L ++ + ++T+          P  +    M A LAD        +P++ 
Subjt:  VAVFLFKGKSVLMGRRRVPHGDSTFAVPGGHLEFGESFEECAARELKEETGLDIEKIEFITATNNLFLDNPSPSHYVVIFMRATLADPDQIARNLEPEKC

Query:  DGWDWYEWDRLPQ
           DWY +DRLPQ
Subjt:  DGWDWYEWDRLPQ

M4I1C6 Geranyl diphosphate phosphohydrolase7.0e-5169.17Show/hide
Query:  VGVAVFLFKGKSVLMGRRRVPHGDSTFAVPGGHLEFGESFEECAARELKEETGLDIEKIEFITATNNLFLDNPSPSHYVVIFMRATLADPDQIARNLEPE
        V V V L +G++VL+GRRR   GDSTF++P GHLEFGESFEECAARELKEET LDI KIE +T TNNLFLD   PS YV +FMRA LADP Q  +N+EPE
Subjt:  VGVAVFLFKGKSVLMGRRRVPHGDSTFAVPGGHLEFGESFEECAARELKEETGLDIEKIEFITATNNLFLDNPSPSHYVVIFMRATLADPDQIARNLEPE

Query:  KCDGWDWYEWDRLPQPLFSPLLNFVNTGFDPFP
         CDGW WYEWD LP+PLF PL N V  GF+PFP
Subjt:  KCDGWDWYEWDRLPQPLFSPLLNFVNTGFDPFP

Q8BG93 Nucleotide triphosphate diphosphatase NUDT151.8e-2240.26Show/hide
Query:  NPPPPPPPTVGVAVFLFK---GKSVLMGRRRVPHGDSTFAVPGGHLEFGESFEECAARELKEETGLDIEKIEFITATNNLFLDNPSPSHYVVIFMRATL-
        N  P   P VGV V +      + VL+G+R+   G  +F +PGGHLEFGE++EECA RE  EE GL ++ + F +  N+ F++  +  HYV I M+  + 
Subjt:  NPPPPPPPTVGVAVFLFK---GKSVLMGRRRVPHGDSTFAVPGGHLEFGESFEECAARELKEETGLDIEKIEFITATNNLFLDNPSPSHYVVIFMRATL-

Query:  ADPDQIARNLEPEKCDGWDWYEWDRLP--QPLFSPLLNFVNTGFDPFPKCDQNH
           D   RN+EPEK + W+W  W+  P    LF  L      G+DPF K D NH
Subjt:  ADPDQIARNLEPEKCDGWDWYEWDRLP--QPLFSPLLNFVNTGFDPFPKCDQNH

Q9CA40 Nudix hydrolase 16.5e-4961.94Show/hide
Query:  PTVGVAVFLFKGKSVLMGRRRVPHGDSTFAVPGGHLEFGESFEECAARELKEETGLDIEKIEFITATNNLFLDNPSPSHYVVIFMRATLADPDQIARNLE
        P V V VF+  G S+L+GRRR   G+STFA+PGGHLEFGESFEECAARE+ EETGL IEK++ +T TNN+F + P+PSHYV + +RA L DP Q  +N+E
Subjt:  PTVGVAVFLFKGKSVLMGRRRVPHGDSTFAVPGGHLEFGESFEECAARELKEETGLDIEKIEFITATNNLFLDNPSPSHYVVIFMRATLADPDQIARNLE

Query:  PEKCDGWDWYEWDRLPQPLFSPLLNFVNTGFDPF
        PEKC+GWDWY+W+ LP+PLF PL     +GF+PF
Subjt:  PEKCDGWDWYEWDRLPQPLFSPLLNFVNTGFDPF

Q9NV35 Nucleotide triphosphate diphosphatase NUDT151.4e-2240.82Show/hide
Query:  PTVGVAVFLFKGK---SVLMGRRRVPHGDSTFAVPGGHLEFGESFEECAARELKEETGLDIEKIEFITATNNLFLDNPSPSHYVVIFMRATL-ADPDQIA
        P VGV V +   K    VL+G+R+   G  +F +PGGHLEFGE++EECA RE  EE  L ++ + F +  N+ F++  +  HYV I M+  +    D   
Subjt:  PTVGVAVFLFKGK---SVLMGRRRVPHGDSTFAVPGGHLEFGESFEECAARELKEETGLDIEKIEFITATNNLFLDNPSPSHYVVIFMRATL-ADPDQIA

Query:  RNLEPEKCDGWDWYEWDRLP--QPLFSPLLNFVNTGFDPFPKCDQNH
        +N+EPEK + W+W  W+ LP    LF  L      G+DPF K D NH
Subjt:  RNLEPEKCDGWDWYEWDRLP--QPLFSPLLNFVNTGFDPFPKCDQNH

Arabidopsis top hitse value%identityAlignment
AT1G68760.1 nudix hydrolase 14.6e-5061.94Show/hide
Query:  PTVGVAVFLFKGKSVLMGRRRVPHGDSTFAVPGGHLEFGESFEECAARELKEETGLDIEKIEFITATNNLFLDNPSPSHYVVIFMRATLADPDQIARNLE
        P V V VF+  G S+L+GRRR   G+STFA+PGGHLEFGESFEECAARE+ EETGL IEK++ +T TNN+F + P+PSHYV + +RA L DP Q  +N+E
Subjt:  PTVGVAVFLFKGKSVLMGRRRVPHGDSTFAVPGGHLEFGESFEECAARELKEETGLDIEKIEFITATNNLFLDNPSPSHYVVIFMRATLADPDQIARNLE

Query:  PEKCDGWDWYEWDRLPQPLFSPLLNFVNTGFDPF
        PEKC+GWDWY+W+ LP+PLF PL     +GF+PF
Subjt:  PEKCDGWDWYEWDRLPQPLFSPLLNFVNTGFDPF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAACCCGCCGCCGCCGCCGCCGCCGACTGTAGGCGTAGCAGTCTTCCTTTTCAAAGGAAAATCCGTGCTCATGGGCCGCCGCCGCGTCCCCCACGGAGACTCCAC
ATTCGCCGTCCCCGGTGGCCACCTCGAGTTCGGGGAGAGTTTCGAGGAGTGTGCGGCGAGGGAATTGAAGGAGGAGACCGGTTTGGACATCGAGAAAATCGAGTTCATTA
CTGCGACGAACAATCTGTTTCTGGATAATCCGAGTCCGTCGCATTACGTGGTGATCTTCATGCGCGCAACATTGGCGGATCCGGACCAGATTGCTCGGAATTTGGAGCCG
GAGAAGTGCGATGGCTGGGACTGGTATGAATGGGATCGTCTTCCTCAACCTCTCTTTAGCCCTCTTCTGAATTTTGTCAACACTGGCTTTGATCCATTCCCTAAATGTGA
TCAAAACCATTGA
mRNA sequenceShow/hide mRNA sequence
AGCCAAATAACCACCATCAGTCCCACTCCCACTTCCACCCGCTCCTCTGCCCTTGCAGTCACCCGCAACTCTGTTCCACCAACATGGACAACCCGCCGCCGCCGCCGCCG
CCGACTGTAGGCGTAGCAGTCTTCCTTTTCAAAGGAAAATCCGTGCTCATGGGCCGCCGCCGCGTCCCCCACGGAGACTCCACATTCGCCGTCCCCGGTGGCCACCTCGA
GTTCGGGGAGAGTTTCGAGGAGTGTGCGGCGAGGGAATTGAAGGAGGAGACCGGTTTGGACATCGAGAAAATCGAGTTCATTACTGCGACGAACAATCTGTTTCTGGATA
ATCCGAGTCCGTCGCATTACGTGGTGATCTTCATGCGCGCAACATTGGCGGATCCGGACCAGATTGCTCGGAATTTGGAGCCGGAGAAGTGCGATGGCTGGGACTGGTAT
GAATGGGATCGTCTTCCTCAACCTCTCTTTAGCCCTCTTCTGAATTTTGTCAACACTGGCTTTGATCCATTCCCTAAATGTGATCAAAACCATTGAAATTTACTTCCAAA
TTTCTGAATGATTTGTCTCCTAATTTTAATTTTCTGTACGAGCTCTGAACAATCAACTTTTTCGCTCAATAATTCAAGACAAGTGGGACTGCTTTTTCAAGAACAAAA
Protein sequenceShow/hide protein sequence
MDNPPPPPPPTVGVAVFLFKGKSVLMGRRRVPHGDSTFAVPGGHLEFGESFEECAARELKEETGLDIEKIEFITATNNLFLDNPSPSHYVVIFMRATLADPDQIARNLEP
EKCDGWDWYEWDRLPQPLFSPLLNFVNTGFDPFPKCDQNH