| GenBank top hits | e value | %identity | Alignment |
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| KAG6605170.1 RNA polymerase sigma factor sigA, partial [Cucurbita argyrosperma subsp. sororia] | 0.0 | 91.14 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFPEKLLYANDHRLGQSQVSPTKSVVIAKSSANFSPSFPSSNRHTQCIKAVKEHVDTPSSPTVEPWLQNSTQWEDE
MMATAAIIGLGAAKRLLNSSSYYSDF EK+LY NDHRLGQ+QVS TKSVVIAK SA+FSPS+P SNRH QCIKAVKEHVDTPSSPT EPWL N+T WEDE
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFPEKLLYANDHRLGQSQVSPTKSVVIAKSSANFSPSFPSSNRHTQCIKAVKEHVDTPSSPTVEPWLQNSTQWEDE
Query: EIDLKCTVEALLLLQKSMLEKQWNLSFEQTVPTDASRGRTQKKVPVTCSGVSARQRRMSSKRKIQSKNCFMVQPKISKQLRSTISPELLQTRLKGYVKGL
E DLKCTVEALLLLQKSMLEKQWNLSFEQTV TDA RG+T+KKVPVTCSGVSARQRRMSSKRKIQSK+ FM QPKISKQL+ +ISPELLQ RL+GYVKGL
Subjt: EIDLKCTVEALLLLQKSMLEKQWNLSFEQTVPTDASRGRTQKKVPVTCSGVSARQRRMSSKRKIQSKNCFMVQPKISKQLRSTISPELLQTRLKGYVKGL
Query: VSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRTELRSRVIECSLAKEKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
VSEE+L H+EVVRLSKKIKVGLALEE KTRLKERL CEPSE+QLAISL+ISR ELRSRV+ECSLA+EKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Subjt: VSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRTELRSRVIECSLAKEKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Query: GLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
GLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV+LQEKGITPS+DRIAESLNMSKKKVKNATEAISKVFSLDREA
Subjt: GLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
Query: FPSLNGLPGETHHSYIADNRLENDPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRK
FPSLNGLPGETHHSYIADNRLEN+PWHGTDTW LK EVNKLINMTL DREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAK RK
Subjt: FPSLNGLPGETHHSYIADNRLENDPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRK
Query: MEAMLLKH
MEAMLLKH
Subjt: MEAMLLKH
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| XP_016902935.1 PREDICTED: RNA polymerase sigma factor sigA [Cucumis melo] | 0.0 | 92.73 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFPEKLLYANDHRLGQSQVSPTKSVVIAKSSANFSPSFPSSNRHTQ-CIKAVKEHVDTPSSPTVEPWLQNSTQWED
MMAT AIIGLGAAKRLLNSSSYYSDF EK+LYAND+RLGQ+QVSPTKSVVIAKSSANFSPS+P SNRH+Q CIKAVKEHV+TPSSPT EPWL N+T WED
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFPEKLLYANDHRLGQSQVSPTKSVVIAKSSANFSPSFPSSNRHTQ-CIKAVKEHVDTPSSPTVEPWLQNSTQWED
Query: EEIDLKCTVEALLLLQKSMLEKQWNLSFEQTVPTDASRGRTQKKVPVTCSGVSARQRRMSSKRKIQSKNCFMVQPKISKQLRSTISPELLQTRLKGYVKG
EE DLKCTVEALLLLQKSMLEKQWNLSFEQTV TD R +T KKVPVTCSGVSARQRRMSSKRKIQSK+ FM QPKISKQLR TISPELLQ RLKGYVKG
Subjt: EEIDLKCTVEALLLLQKSMLEKQWNLSFEQTVPTDASRGRTQKKVPVTCSGVSARQRRMSSKRKIQSKNCFMVQPKISKQLRSTISPELLQTRLKGYVKG
Query: LVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRTELRSRVIECSLAKEKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
L+SEELLSHAEVVRLSKKIKVGLALEE KTRLKERLGCEPSEDQLAISLKISR ELRSR++ECSLA+EKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Subjt: LVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRTELRSRVIECSLAKEKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Query: IGLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
IGLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV+LQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADNRLENDPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
AFPSLNGLPGETHHSYIADN LEN+PWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Subjt: AFPSLNGLPGETHHSYIADNRLENDPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Query: KMEAMLLKH
KMEAML+KH
Subjt: KMEAMLLKH
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| XP_022148631.1 RNA polymerase sigma factor sigA [Momordica charantia] | 0.0 | 99.8 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFPEKLLYANDHRLGQSQVSPTKSVVIAKSSANFSPSFPSSNRHTQCIKAVKEHVDTPSSPTVEPWLQNSTQWEDE
MMATAAIIGLGAAKRLLNSSSYYSDFPEKLLYANDHRLGQSQVSPTKSVVIAKSSANFSPSFPSSNRHTQCIKAVKEHVDTPSSPTVEPWLQNSTQWEDE
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFPEKLLYANDHRLGQSQVSPTKSVVIAKSSANFSPSFPSSNRHTQCIKAVKEHVDTPSSPTVEPWLQNSTQWEDE
Query: EIDLKCTVEALLLLQKSMLEKQWNLSFEQTVPTDASRGRTQKKVPVTCSGVSARQRRMSSKRKIQSKNCFMVQPKISKQLRSTISPELLQTRLKGYVKGL
EIDLKCTVEALLLLQKSMLEKQWNLSFEQTVPTDASRGRTQKKVPVTCSGVSARQRRMSSKRKIQSKNCFMVQPKISKQLRSTISPELLQTRLKGYVKGL
Subjt: EIDLKCTVEALLLLQKSMLEKQWNLSFEQTVPTDASRGRTQKKVPVTCSGVSARQRRMSSKRKIQSKNCFMVQPKISKQLRSTISPELLQTRLKGYVKGL
Query: VSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRTELRSRVIECSLAKEKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
VSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRTELRSRVIECSLAKEKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Subjt: VSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRTELRSRVIECSLAKEKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Query: GLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
GLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
Subjt: GLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
Query: FPSLNGLPGETHHSYIADNRLENDPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRK
FPSLNGLPGETHHSYIADN LENDPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRK
Subjt: FPSLNGLPGETHHSYIADNRLENDPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRK
Query: MEAMLLKH
MEAMLLKH
Subjt: MEAMLLKH
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| XP_023533104.1 RNA polymerase sigma factor sigA-like [Cucurbita pepo subsp. pepo] | 0.0 | 90.94 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFPEKLLYANDHRLGQSQVSPTKSVVIAKSSANFSPSFPSSNRHTQCIKAVKEHVDTPSSPTVEPWLQNSTQWEDE
MMATAAIIGLGAAKRLLNSSSYYSDF EK+LY NDHRLGQ+QVS TKSVVIAK SA+FSPS+P SNRH QCIKAVKEHVDTPSSPT EPWL N+T WEDE
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFPEKLLYANDHRLGQSQVSPTKSVVIAKSSANFSPSFPSSNRHTQCIKAVKEHVDTPSSPTVEPWLQNSTQWEDE
Query: EIDLKCTVEALLLLQKSMLEKQWNLSFEQTVPTDASRGRTQKKVPVTCSGVSARQRRMSSKRKIQSKNCFMVQPKISKQLRSTISPELLQTRLKGYVKGL
E DLKCTVEALLLLQKSMLEKQWNLSFEQTV TD RG+T+KKVPVTCSGVSARQRRMSSKRKIQSK+ F+ QPKISKQL+ +ISPELLQ RL+GYVKGL
Subjt: EIDLKCTVEALLLLQKSMLEKQWNLSFEQTVPTDASRGRTQKKVPVTCSGVSARQRRMSSKRKIQSKNCFMVQPKISKQLRSTISPELLQTRLKGYVKGL
Query: VSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRTELRSRVIECSLAKEKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
VSEE+L H+EVVRLSKKIKVGLALEE KTRLKERL CEPSE+QLAISL+ISR ELRSRV+ECSLA+EKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Subjt: VSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRTELRSRVIECSLAKEKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Query: GLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
GLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV+LQEKGITPS+DRIAESLNMSKKKVKNATEAISKVFSLDREA
Subjt: GLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
Query: FPSLNGLPGETHHSYIADNRLENDPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRK
FPSLNGLPGETHHSYIADNRLEN+PWHGTDTWILK EVNKLINMTL DREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAK RK
Subjt: FPSLNGLPGETHHSYIADNRLENDPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRK
Query: MEAMLLKH
MEAMLLKH
Subjt: MEAMLLKH
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| XP_038902049.1 RNA polymerase sigma factor sigA [Benincasa hispida] | 0.0 | 94.7 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFPEKLLYAN-DHRLGQSQVSPTKSVVIAKSSANFSPSFPSSNRHTQCIKAVKEHVDTPSSPTVEPWLQNSTQWED
MMATAAIIGLGAAKRLLNSSSYYSDF EK+LY N DHRLGQ+QVSPTKSVVIAKSSANFSPS+PSSNRH+QCIKAVKEHVDTPSSPT EPWL N+T WED
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFPEKLLYAN-DHRLGQSQVSPTKSVVIAKSSANFSPSFPSSNRHTQCIKAVKEHVDTPSSPTVEPWLQNSTQWED
Query: EEIDLKCTVEALLLLQKSMLEKQWNLSFEQTVPTDASRGRTQKKVPVTCSGVSARQRRMSSKRKIQSKNCFMVQPKISKQLRSTISPELLQTRLKGYVKG
EEIDLKCTVEALLLLQKSMLEKQWNLSFEQTV TDA RG+T+KKVPVTCSGVSARQRRMSSKRKIQSK+ FM QPKISKQLR TISPELLQ RLKGYVKG
Subjt: EEIDLKCTVEALLLLQKSMLEKQWNLSFEQTVPTDASRGRTQKKVPVTCSGVSARQRRMSSKRKIQSKNCFMVQPKISKQLRSTISPELLQTRLKGYVKG
Query: LVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRTELRSRVIECSLAKEKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
L+SEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISR ELRSRV+ECSLA+EKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Subjt: LVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRTELRSRVIECSLAKEKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Query: IGLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
IGLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADNRLENDPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
AFPSLNGLPGETHHSYIADN LEN+PWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Subjt: AFPSLNGLPGETHHSYIADNRLENDPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Query: KMEAMLLKH
KMEAMLLKH
Subjt: KMEAMLLKH
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A1S4E4N5 RNA polymerase sigma factor sigA | 0.0 | 92.73 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFPEKLLYANDHRLGQSQVSPTKSVVIAKSSANFSPSFPSSNRHTQ-CIKAVKEHVDTPSSPTVEPWLQNSTQWED
MMAT AIIGLGAAKRLLNSSSYYSDF EK+LYAND+RLGQ+QVSPTKSVVIAKSSANFSPS+P SNRH+Q CIKAVKEHV+TPSSPT EPWL N+T WED
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFPEKLLYANDHRLGQSQVSPTKSVVIAKSSANFSPSFPSSNRHTQ-CIKAVKEHVDTPSSPTVEPWLQNSTQWED
Query: EEIDLKCTVEALLLLQKSMLEKQWNLSFEQTVPTDASRGRTQKKVPVTCSGVSARQRRMSSKRKIQSKNCFMVQPKISKQLRSTISPELLQTRLKGYVKG
EE DLKCTVEALLLLQKSMLEKQWNLSFEQTV TD R +T KKVPVTCSGVSARQRRMSSKRKIQSK+ FM QPKISKQLR TISPELLQ RLKGYVKG
Subjt: EEIDLKCTVEALLLLQKSMLEKQWNLSFEQTVPTDASRGRTQKKVPVTCSGVSARQRRMSSKRKIQSKNCFMVQPKISKQLRSTISPELLQTRLKGYVKG
Query: LVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRTELRSRVIECSLAKEKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
L+SEELLSHAEVVRLSKKIKVGLALEE KTRLKERLGCEPSEDQLAISLKISR ELRSR++ECSLA+EKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Subjt: LVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRTELRSRVIECSLAKEKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Query: IGLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
IGLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV+LQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADNRLENDPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
AFPSLNGLPGETHHSYIADN LEN+PWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Subjt: AFPSLNGLPGETHHSYIADNRLENDPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Query: KMEAMLLKH
KMEAML+KH
Subjt: KMEAMLLKH
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| A0A5D3BME8 RNA polymerase sigma factor sigA | 0.0 | 92.73 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFPEKLLYANDHRLGQSQVSPTKSVVIAKSSANFSPSFPSSNRHTQ-CIKAVKEHVDTPSSPTVEPWLQNSTQWED
MMAT AIIGLGAAKRLLNSSSYYSDF EK+LYAND+RLGQ+QVSPTKSVVIAKSSANFSPS+P SNRH+Q CIKAVKEHV+TPSSPT EPWL N+T WED
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFPEKLLYANDHRLGQSQVSPTKSVVIAKSSANFSPSFPSSNRHTQ-CIKAVKEHVDTPSSPTVEPWLQNSTQWED
Query: EEIDLKCTVEALLLLQKSMLEKQWNLSFEQTVPTDASRGRTQKKVPVTCSGVSARQRRMSSKRKIQSKNCFMVQPKISKQLRSTISPELLQTRLKGYVKG
EE DLKCTVEALLLLQKSMLEKQWNLSFEQTV TD R +T KKVPVTCSGVSARQRRMSSKRKIQSK+ FM QPKISKQLR TISPELLQ RLKGYVKG
Subjt: EEIDLKCTVEALLLLQKSMLEKQWNLSFEQTVPTDASRGRTQKKVPVTCSGVSARQRRMSSKRKIQSKNCFMVQPKISKQLRSTISPELLQTRLKGYVKG
Query: LVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRTELRSRVIECSLAKEKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
L+SEELLSHAEVVRLSKKIKVGLALEE KTRLKERLGCEPSEDQLAISLKISR ELRSR++ECSLA+EKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Subjt: LVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRTELRSRVIECSLAKEKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Query: IGLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
IGLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV+LQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADNRLENDPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
AFPSLNGLPGETHHSYIADN LEN+PWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Subjt: AFPSLNGLPGETHHSYIADNRLENDPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Query: KMEAMLLKH
KMEAML+KH
Subjt: KMEAMLLKH
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| A0A6J1D604 RNA polymerase sigma factor sigA | 0.0 | 99.8 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFPEKLLYANDHRLGQSQVSPTKSVVIAKSSANFSPSFPSSNRHTQCIKAVKEHVDTPSSPTVEPWLQNSTQWEDE
MMATAAIIGLGAAKRLLNSSSYYSDFPEKLLYANDHRLGQSQVSPTKSVVIAKSSANFSPSFPSSNRHTQCIKAVKEHVDTPSSPTVEPWLQNSTQWEDE
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFPEKLLYANDHRLGQSQVSPTKSVVIAKSSANFSPSFPSSNRHTQCIKAVKEHVDTPSSPTVEPWLQNSTQWEDE
Query: EIDLKCTVEALLLLQKSMLEKQWNLSFEQTVPTDASRGRTQKKVPVTCSGVSARQRRMSSKRKIQSKNCFMVQPKISKQLRSTISPELLQTRLKGYVKGL
EIDLKCTVEALLLLQKSMLEKQWNLSFEQTVPTDASRGRTQKKVPVTCSGVSARQRRMSSKRKIQSKNCFMVQPKISKQLRSTISPELLQTRLKGYVKGL
Subjt: EIDLKCTVEALLLLQKSMLEKQWNLSFEQTVPTDASRGRTQKKVPVTCSGVSARQRRMSSKRKIQSKNCFMVQPKISKQLRSTISPELLQTRLKGYVKGL
Query: VSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRTELRSRVIECSLAKEKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
VSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRTELRSRVIECSLAKEKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Subjt: VSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRTELRSRVIECSLAKEKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Query: GLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
GLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
Subjt: GLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
Query: FPSLNGLPGETHHSYIADNRLENDPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRK
FPSLNGLPGETHHSYIADN LENDPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRK
Subjt: FPSLNGLPGETHHSYIADNRLENDPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRK
Query: MEAMLLKH
MEAMLLKH
Subjt: MEAMLLKH
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| A0A6J1G739 RNA polymerase sigma factor sigA-like | 0.0 | 90.35 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFPEKLLYANDHRLGQSQVSPTKSVVIAKSSANFSPSFPSSNRHTQCIKAVKEHVDTPSSPTVEPWLQNSTQWEDE
MMATAAIIGLGAAKRLLNSSSYYSDF EK+LY NDHRLGQ+QVS TKSVVIAK SA+FSPS+P SNRH QCIKAVKEHVDTPSSPT EPWL N+T WEDE
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFPEKLLYANDHRLGQSQVSPTKSVVIAKSSANFSPSFPSSNRHTQCIKAVKEHVDTPSSPTVEPWLQNSTQWEDE
Query: EIDLKCTVEALLLLQKSMLEKQWNLSFEQTVPTDASRGRTQKKVPVTCSGVSARQRRMSSKRKIQSKNCFMVQPKISKQLRSTISPELLQTRLKGYVKGL
E DLKCTVEALLLLQKSMLEKQWNLSFEQTV TD RG+T+KKVPVTCSGVSARQRRM+SKRKIQSK+ FM QPKISKQ + +ISPELLQ RL+GYVKGL
Subjt: EIDLKCTVEALLLLQKSMLEKQWNLSFEQTVPTDASRGRTQKKVPVTCSGVSARQRRMSSKRKIQSKNCFMVQPKISKQLRSTISPELLQTRLKGYVKGL
Query: VSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRTELRSRVIECSLAKEKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
VSEE+L H+EVVRLSKKIKVGLALEE KTRLKERL CEPSE+QLAISL+IS ELRSRV+ECSLA+EKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Subjt: VSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRTELRSRVIECSLAKEKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Query: GLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
GLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV+LQEKGITPS+DRIAESLNMSKKKVKNATEAISKVFSLDREA
Subjt: GLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
Query: FPSLNGLPGETHHSYIADNRLENDPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRK
FPSLNGLPGETHHSYIADNRLEN+PWHGTDTW LK EVNKLINMTL DREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAK RK
Subjt: FPSLNGLPGETHHSYIADNRLENDPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRK
Query: MEAMLLKH
MEAMLLKH
Subjt: MEAMLLKH
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| A0A6J1KWY7 RNA polymerase sigma factor sigA-like | 0.0 | 90.75 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFPEKLLYANDHRLGQSQVSPTKSVVIAKSSANFSPSFPSSNRHTQCIKAVKEHVDTPSSPTVEPWLQNSTQWEDE
MMATAAIIGLGAAKRLLNSSSYYSDF EK+LY NDHRLGQ+QVS TK VVIAK SA+FSPS+ SNRH QCIKAVKEHVDTPSSPT EPWL N+T WEDE
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFPEKLLYANDHRLGQSQVSPTKSVVIAKSSANFSPSFPSSNRHTQCIKAVKEHVDTPSSPTVEPWLQNSTQWEDE
Query: EIDLKCTVEALLLLQKSMLEKQWNLSFEQTVPTDASRGRTQKKVPVTCSGVSARQRRMSSKRKIQSKNCFMVQPKISKQLRSTISPELLQTRLKGYVKGL
E DLKCTVEALLLLQKSMLEKQWNLSFEQTV TDA RG+T+KKVPVTCSGVSARQRRMSSKRKIQSK+ FM QPKISKQL+ ISPELLQ RL+GYVKGL
Subjt: EIDLKCTVEALLLLQKSMLEKQWNLSFEQTVPTDASRGRTQKKVPVTCSGVSARQRRMSSKRKIQSKNCFMVQPKISKQLRSTISPELLQTRLKGYVKGL
Query: VSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRTELRSRVIECSLAKEKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
VSEE+L H+EVVRLSKKIKVGLALEE KTRLKERL C+PSE+QLAISL+ISR ELRSRV+ECSLA+EKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Subjt: VSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRTELRSRVIECSLAKEKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Query: GLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
GLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV+LQEKGITPS+DRIAESLNMSKKKVKNATEAISKVFSLDREA
Subjt: GLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
Query: FPSLNGLPGETHHSYIADNRLENDPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRK
FPSLNGLPGETHHSYIADNRLEN+PWHGTDTWILK EVNKLINMTL DREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAK RK
Subjt: FPSLNGLPGETHHSYIADNRLENDPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRK
Query: MEAMLLKH
MEAMLLKH
Subjt: MEAMLLKH
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| O24629 RNA polymerase sigma factor sigA | 8.9e-191 | 69.17 | Show/hide |
Query: MATAAIIGLGAAKRLLNSSSYYSDFPEKLLYANDHRLGQSQVSPTKSVVIAKSSANFSPSFPSSNRHTQCIKAVKEHVDTPSSPTVEPWLQNSTQWEDEE
MATAA+IGL KRLL+SS Y+SD EK L NDH Q ++ TKS + AK ++N+SPSFPSSNRHTQ KA+KE VD S T +PWL N T D+E
Subjt: MATAAIIGLGAAKRLLNSSSYYSDFPEKLLYANDHRLGQSQVSPTKSVVIAKSSANFSPSFPSSNRHTQCIKAVKEHVDTPSSPTVEPWLQNSTQWEDEE
Query: IDLKC---------TVEALLLLQKSMLEKQWNLSFEQTVPTDASRGRT--QKKVPV-TCSGVSARQRRMSSKRKIQSKNCFMVQPKISKQLRSTISPELL
++ +C +VEA+LLLQKSMLEK WNLSFE+ V ++ T +KK+PV TCSG+SARQRR+ +K+K + V S +
Subjt: IDLKC---------TVEALLLLQKSMLEKQWNLSFEQTVPTDASRGRT--QKKVPV-TCSGVSARQRRMSSKRKIQSKNCFMVQPKISKQLRSTISPELL
Query: QTRLKGYVKGLVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRTELRSRVIECSLAKEKLAMSNVRLVMSIAQRYDNMGA
+++GYVKG++SE++LSH EVVRLSKKIK GL L++ K+RLK+RLGCEPS++QLA+SLKISR EL++ ++EC LA+EKLAMSNVRLVMSIAQRYDN+GA
Subjt: QTRLKGYVKGLVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRTELRSRVIECSLAKEKLAMSNVRLVMSIAQRYDNMGA
Query: EMADLVQGGLIGLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEA
EM+DLVQGGLIGLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALV+NSRTLRLPTHLHERLGLIRNAK+RLQEKGITPS+DRIAESLNMS+KKV+NATEA
Subjt: EMADLVQGGLIGLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEA
Query: ISKVFSLDREAFPSLNGLPGETHHSYIADNRLENDPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVAL
+SKVFSLDR+AFPSLNGLPGETHHSYIAD RLEN+PWHG D LK EV+KLI+ TLG+RE+EIIRLY+GLD ECLTWE+ISKRIGLSRERVRQVGLVAL
Subjt: ISKVFSLDREAFPSLNGLPGETHHSYIADNRLENDPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVAL
Query: EKLKKAAKTRKMEAMLLKH
EKLK AA+ RKMEAM+LK+
Subjt: EKLKKAAKTRKMEAMLLKH
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| P26683 RNA polymerase sigma factor SigA | 4.9e-40 | 34.36 | Show/hide |
Query: KISKQLRSTISPELLQTR--LKGYVKGLVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRTELRSRVIECSLAKEKLAMS
K +K R T S + T ++ Y++ + LL E + L++KI L LE + RL E+L +P + + A ++++ R R+ AK+K+ S
Subjt: KISKQLRSTISPELLQTR--LKGYVKGLVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRTELRSRVIECSLAKEKLAMS
Query: NVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLI-RNAKVRLQEKGITPSLDR
N+RLV+SIA++Y N G DL+Q G +GL+R EKFD KG++ STY WWIRQ ++RA+ + SRT+RLP HL+E + I + K+ QE G P+ +
Subjt: NVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLI-RNAKVRLQEKGITPSLDR
Query: IAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNRLEND---PWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDN-ECLTW
IA + M+ +K++ ++ SL+ G+ S + D +E+D P +L+ ++ K+++ +L RER+++RL +GLD+ T
Subjt: IAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNRLEND---PWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDN-ECLTW
Query: EEISKRIGLSRERVRQVGLVALEKLK
EEI + ++RER+RQ+ AL KL+
Subjt: EEISKRIGLSRERVRQVGLVALEKLK
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| P38023 RNA polymerase sigma factor SigA1 | 6.5e-40 | 35.06 | Show/hide |
Query: KISKQLRSTISPELLQTRLKGYVKGLVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRTELRSRVIECSLAKEKLAMSNV
K ++R T + + ++ Y++ + LL E + L+++I LALE + L E+L PS+ + A ++ E R R+ AK+K+ SN+
Subjt: KISKQLRSTISPELLQTRLKGYVKGLVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRTELRSRVIECSLAKEKLAMSNV
Query: RLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLI-RNAKVRLQEKGITPSLDRIA
RLV+SIA++Y N G DL+Q G +GL+R EKFD KG++ STY WWIRQ ++RA+ + SRT+RLP HL+E + I + K+ QE G P+ + IA
Subjt: RLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLI-RNAKVRLQEKGITPSLDRIA
Query: ESLNMSKKKV----KNATEAISKVFSLDREAFPSLNGL---PGETHHSYIADNRLENDPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDN-ECL
+ M+ +K+ K+A IS + +E L GET +A N L D L+ ++ TL RER+++RL +GLD+
Subjt: ESLNMSKKKV----KNATEAISKVFSLDREAFPSLNGL---PGETHHSYIADNRLENDPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDN-ECL
Query: TWEEISKRIGLSRERVRQVGLVALEKLK
T EEI + ++RER+RQ+ AL KL+
Subjt: TWEEISKRIGLSRERVRQVGLVALEKLK
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| Q0J7T6 RNA polymerase sigma factor sigA | 1.9e-132 | 51.5 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSD-FPEKLLYANDHRLGQSQVSPTKSVVIAKSSANFSPSFPSSNRHT---------------QCIKAVKEHVD----
M AT A+IGL A RLL++S +D P+K+ LG + +F+P P++ + T Q ++A++ H
Subjt: MMATAAIIGLGAAKRLLNSSSYYSD-FPEKLLYANDHRLGQSQVSPTKSVVIAKSSANFSPSFPSSNRHT---------------QCIKAVKEHVD----
Query: -TPSSPTVEPWLQNSTQWEDEEIDLKCTVEALLLLQKSMLEKQWNLSFEQTVPTDA------SRGRTQKKVPVTCSGVSARQRRMSSKRKIQSKNCFMVQ
P P P + DL+ ++EA++LLQ+SMLEKQW L F+ A ++ V V S VSARQRRMS +R+ ++KN
Subjt: -TPSSPTVEPWLQNSTQWEDEEIDLKCTVEALLLLQKSMLEKQWNLSFEQTVPTDA------SRGRTQKKVPVTCSGVSARQRRMSSKRKIQSKNCFMVQ
Query: PKISKQLRSTISPELLQTRLKGYVKGLVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRTELRSRVIECSLAKEKLAMSN
+SPEL+Q+R + Y++G VS+ELL+H +VV LS KIK G+ L++++++LKE+LG EPS QLA SLKIS ELRSR+ E LA+E L MSN
Subjt: PKISKQLRSTISPELLQTRLKGYVKGLVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRTELRSRVIECSLAKEKLAMSN
Query: VRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIA
+RLV+SIAQ+YDN+G E+ADL+QGGLIGLLRGIEKFD+S+GFRISTYVYWWIRQGVSRAL ENS+T RLPT+LHERL IR AK L+++GI P+++ IA
Subjt: VRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIA
Query: ESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNRLENDPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKR
SLN+S+KKV NATEA++KV SLD++AFPSLNGLPGET HSYI D + NDPWHG + W LK EVNKL+N TL +RER+IIRLYHG+ +C TWE+IS++
Subjt: ESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNRLENDPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKR
Query: IGLSRERVRQVGLVALEKLKKAAKTRKMEAML
GLSRERVRQVGL+A+EKLK AA+ + +EA+L
Subjt: IGLSRERVRQVGLVALEKLKKAAKTRKMEAML
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| Q31QG5 RNA polymerase sigma factor SigA3 | 1.1e-39 | 34.63 | Show/hide |
Query: LKGYVKGLVSEELLSHAEVVRLSKKIKVGLALEE-RKTRLKERLGCEPSEDQLAISLKISRTELRSRVIECSLAKEKLAMSNVRLVMSIAQRYDNMGAEM
++ Y++ + LL+H E V L K+++ + L+E R+T E +PS+ + A + +S ELR + AK K+ +N+RLV+S+A++Y ++
Subjt: LKGYVKGLVSEELLSHAEVVRLSKKIKVGLALEE-RKTRLKERLGCEPSEDQLAISLKISRTELRSRVIECSLAKEKLAMSNVRLVMSIAQRYDNMGAEM
Query: ADLVQGGLIGLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRL-QEKGITPSLDRIAESLNMSKKKVKNATEAI
DL+Q G IG+ RG+EKFD +KG+R STY YWWIRQ ++RA+ E +RT+RLP H+ E+L I+ + +L Q+ G T +L +A +L+++ +V++ E
Subjt: ADLVQGGLIGLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRL-QEKGITPSLDRIAESLNMSKKKVKNATEAI
Query: SKVFSLDREAFPSLNGLPGETHHSYIADNRLEND---PWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGL-DNECLTWEEISKRIGLSRERVRQVGL
SLD G+ + + D LE D P T ++ ++++L++ L +++R++I L +GL D + +T I R+ +SRERVRQ+
Subjt: SKVFSLDREAFPSLNGLPGETHHSYIADNRLEND---PWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGL-DNECLTWEEISKRIGLSRERVRQVGL
Query: VALEKLKKA
AL L++A
Subjt: VALEKLKKA
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT1G08540.1 RNApolymerase sigma subunit 2 | 1.3e-40 | 36.13 | Show/hide |
Query: SEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRTELRSRVIECSLAKEKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIG
S +LL+ E LS I+ L LE +T L ER G +P+ Q A + + + LR R+ +L K+K+ SN+RLV+SIA+ Y G + DLVQ G G
Subjt: SEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRTELRSRVIECSLAKEKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIG
Query: LLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRL-QEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
L+RG EKFD++KGF+ STY +WWI+Q V ++L + SR +RLP H+ E ++ A+ +L E G P + IAE+ +S K++ + SLD++
Subjt: LLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRL-QEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
Query: FPSLNGLPGETHHSYIADNRLENDPWHGTDTWI---LKAEVNKLINMTLGDREREIIRLYHGL-DNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAA
+ N P E IAD D I ++ +++K+++ +LG RE+++IR G+ D T +EI + +G+SRERVRQ+ A KLK
Subjt: FPSLNGLPGETHHSYIADNRLENDPWHGTDTWI---LKAEVNKLINMTLGDREREIIRLYHGL-DNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAA
Query: KTRKMEAMLL
+ ++ L+
Subjt: KTRKMEAMLL
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| AT1G64860.1 sigma factor A | 6.3e-192 | 69.17 | Show/hide |
Query: MATAAIIGLGAAKRLLNSSSYYSDFPEKLLYANDHRLGQSQVSPTKSVVIAKSSANFSPSFPSSNRHTQCIKAVKEHVDTPSSPTVEPWLQNSTQWEDEE
MATAA+IGL KRLL+SS Y+SD EK L NDH Q ++ TKS + AK ++N+SPSFPSSNRHTQ KA+KE VD S T +PWL N T D+E
Subjt: MATAAIIGLGAAKRLLNSSSYYSDFPEKLLYANDHRLGQSQVSPTKSVVIAKSSANFSPSFPSSNRHTQCIKAVKEHVDTPSSPTVEPWLQNSTQWEDEE
Query: IDLKC---------TVEALLLLQKSMLEKQWNLSFEQTVPTDASRGRT--QKKVPV-TCSGVSARQRRMSSKRKIQSKNCFMVQPKISKQLRSTISPELL
++ +C +VEA+LLLQKSMLEK WNLSFE+ V ++ T +KK+PV TCSG+SARQRR+ +K+K + V S +
Subjt: IDLKC---------TVEALLLLQKSMLEKQWNLSFEQTVPTDASRGRT--QKKVPV-TCSGVSARQRRMSSKRKIQSKNCFMVQPKISKQLRSTISPELL
Query: QTRLKGYVKGLVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRTELRSRVIECSLAKEKLAMSNVRLVMSIAQRYDNMGA
+++GYVKG++SE++LSH EVVRLSKKIK GL L++ K+RLK+RLGCEPS++QLA+SLKISR EL++ ++EC LA+EKLAMSNVRLVMSIAQRYDN+GA
Subjt: QTRLKGYVKGLVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRTELRSRVIECSLAKEKLAMSNVRLVMSIAQRYDNMGA
Query: EMADLVQGGLIGLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEA
EM+DLVQGGLIGLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALV+NSRTLRLPTHLHERLGLIRNAK+RLQEKGITPS+DRIAESLNMS+KKV+NATEA
Subjt: EMADLVQGGLIGLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEA
Query: ISKVFSLDREAFPSLNGLPGETHHSYIADNRLENDPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVAL
+SKVFSLDR+AFPSLNGLPGETHHSYIAD RLEN+PWHG D LK EV+KLI+ TLG+RE+EIIRLY+GLD ECLTWE+ISKRIGLSRERVRQVGLVAL
Subjt: ISKVFSLDREAFPSLNGLPGETHHSYIADNRLENDPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVAL
Query: EKLKKAAKTRKMEAMLLKH
EKLK AA+ RKMEAM+LK+
Subjt: EKLKKAAKTRKMEAMLLKH
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| AT1G64860.2 sigma factor A | 2.6e-177 | 68.04 | Show/hide |
Query: MATAAIIGLGAAKRLLNSSSYYSDFPEKLLYANDHRLGQSQVSPTKSVVIAKSSANFSPSFPSSNRHTQCIKAVKEHVDTPSSPTVEPWLQNSTQWEDEE
MATAA+IGL KRLL+SS Y+SD EK L NDH Q ++ TKS + AK ++N+SPSFPSSNRHTQ KA+KE VD S T +PWL N T D+E
Subjt: MATAAIIGLGAAKRLLNSSSYYSDFPEKLLYANDHRLGQSQVSPTKSVVIAKSSANFSPSFPSSNRHTQCIKAVKEHVDTPSSPTVEPWLQNSTQWEDEE
Query: IDLKC---------TVEALLLLQKSMLEKQWNLSFEQTVPTDASRGRT--QKKVPV-TCSGVSARQRRMSSKRKIQSKNCFMVQPKISKQLRSTISPELL
++ +C +VEA+LLLQKSMLEK WNLSFE+ V ++ T +KK+PV TCSG+SARQRR+ +K+K + V S +
Subjt: IDLKC---------TVEALLLLQKSMLEKQWNLSFEQTVPTDASRGRT--QKKVPV-TCSGVSARQRRMSSKRKIQSKNCFMVQPKISKQLRSTISPELL
Query: QTRLKGYVKGLVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRTELRSRVIECSLAKEKLAMSNVRLVMSIAQRYDNMGA
+++GYVKG++SE++LSH EVVRLSKKIK GL L++ K+RLK+RLGCEPS++QLA+SLKISR EL++ ++EC LA+EKLAMSNVRLVMSIAQRYDN+GA
Subjt: QTRLKGYVKGLVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRTELRSRVIECSLAKEKLAMSNVRLVMSIAQRYDNMGA
Query: EMADLVQGGLIGLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEA
EM+DLVQGGLIGLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALV+NSRTLRLPTHLHERLGLIRNAK+RLQEKGITPS+DRIAESLNMS+KKV+NATEA
Subjt: EMADLVQGGLIGLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEA
Query: ISKVFSLDREAFPSLNGLPGETHHSYIADNRLENDPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRI
+SKVFSLDR+AFPSLNGLPGETHHSYIAD RLEN+PWHG D LK EV+KLI+ TLG+RE+EIIRLY+GLD ECLTWE+ISKRI
Subjt: ISKVFSLDREAFPSLNGLPGETHHSYIADNRLENDPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRI
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| AT2G36990.1 RNApolymerase sigma-subunit F | 1.2e-36 | 32.59 | Show/hide |
Query: LKGYVKGLVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRTELRSRVIECSLAKEKLAMSNVRLVMSIAQRYDNMGAEMA
L+ ++ G +++LL+ E L I+ L LE+ KT+L+ + GCEP+ + A ++ IS L+S + ++EKL +N+RLV+ IA++Y N G
Subjt: LKGYVKGLVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRTELRSRVIECSLAKEKLAMSNVRLVMSIAQRYDNMGAEMA
Query: DLVQGGLIGLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNA-KVRLQEKGITPSLDRIAESLNMSKKKVKNATEAIS
DL+Q G +GL++ +EKF G R +TY YWWIRQ + +++ +NSRT+RLP +++ LG + A K +QE PS + +A + +S +K+
Subjt: DLVQGGLIGLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNA-KVRLQEKGITPSLDRIAESLNMSKKKVKNATEAIS
Query: KVFSLDREAFPSLNGLPGETHHSYIADNRLENDPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLD-NECLTWEEISKRIGLSRERVRQVGLVALE
S+ + + + T D+ +E P +++ V L+N+ L +ER II+L G+D + + EI + GLS+ERVRQ+ AL
Subjt: KVFSLDREAFPSLNGLPGETHHSYIADNRLENDPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLD-NECLTWEEISKRIGLSRERVRQVGLVALE
Query: KLKKAAKTRKMEA
+LK+ + + A
Subjt: KLKKAAKTRKMEA
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| AT5G13730.1 sigma factor 4 | 1.2e-33 | 34.98 | Show/hide |
Query: VKGLVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRTELRSRVIEC----SLAKEKLAMSNVRLVMSIAQRYDNMGAEMA
V G LS E V+L +K G LE T ++E + +++ L R + + E A+EK+ RLV+SIA Y G +
Subjt: VKGLVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRTELRSRVIEC----SLAKEKLAMSNVRLVMSIAQRYDNMGAEMA
Query: DLVQGGLIGLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEK-GITPSLDRIAESLNMSKKKVKNATEAIS
DL+Q G IGLLRG E+FD +G+++STYVYWWI+Q + RA+ SR ++LP + E + A L K PS + IAE LN++ V+ A E
Subjt: DLVQGGLIGLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEK-GITPSLDRIAESLNMSKKKVKNATEAIS
Query: KVFSLDREAFPSLNGLPGETHHSYIADNRLENDPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNEC-LTWEEISKRIGLSRERVRQVGLVALE
SLDR A + G I E P +K E+ +L+ +L RE ++ LY GL+ E +++EEI K + LSRERVRQ+ +AL+
Subjt: KVFSLDREAFPSLNGLPGETHHSYIADNRLENDPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNEC-LTWEEISKRIGLSRERVRQVGLVALE
Query: KLK
KL+
Subjt: KLK
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