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MC02g1164 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC02g1164
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionB3 domain-containing protein
Genome locationMC02:10204322..10204585
RNA-Seq ExpressionMC02g1164
SyntenyMC02g1164
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0016020 - membrane (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR003340 - B3 DNA binding domain
IPR015300 - DNA-binding pseudobarrel domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045855.1 putative B3 domain-containing protein [Cucumis melo var. makuwa]3.41e-2962.22Show/hide
Query:  LSSKMCLKVADGREWNLGLAKSNG--RVWFSDGWQKFAEFYSLGFGHFLVFRYESQSSSFHVVVFDISATEIEYPAKSIRLDKVEEMVKI
        L  ++CLKV DG+EWN+GL KSN   RVWF  GW+K  EFYS+  G+FLVF+YE+QSSS +VV+FD +ATEIEYP K I LDK +E VK+
Subjt:  LSSKMCLKVADGREWNLGLAKSNG--RVWFSDGWQKFAEFYSLGFGHFLVFRYESQSSSFHVVVFDISATEIEYPAKSIRLDKVEEMVKI

XP_008457959.1 PREDICTED: putative B3 domain-containing protein Os03g0621600 isoform X2 [Cucumis melo]1.57e-2862.22Show/hide
Query:  LSSKMCLKVADGREWNLGLAKSNG--RVWFSDGWQKFAEFYSLGFGHFLVFRYESQSSSFHVVVFDISATEIEYPAKSIRLDKVEEMVKI
        L  ++CLKV DG+EWN+GL KSN   RVWF  GW+K  EFYS+  G+FLVF+YE+QSSS +VV+FD +ATEIEYP K I LDK +E VK+
Subjt:  LSSKMCLKVADGREWNLGLAKSNG--RVWFSDGWQKFAEFYSLGFGHFLVFRYESQSSSFHVVVFDISATEIEYPAKSIRLDKVEEMVKI

XP_022158239.1 B3 domain-containing transcription factor VRN1-like [Momordica charantia]9.16e-51100Show/hide
Query:  LSSKMCLKVADGREWNLGLAKSNGRVWFSDGWQKFAEFYSLGFGHFLVFRYESQSSSFHVVVFDISATEIEYPAKSIRLDKVEEMVKI
        LSSKMCLKVADGREWNLGLAKSNGRVWFSDGWQKFAEFYSLGFGHFLVFRYESQSSSFHVVVFDISATEIEYPAKSIRLDKVEEMVKI
Subjt:  LSSKMCLKVADGREWNLGLAKSNGRVWFSDGWQKFAEFYSLGFGHFLVFRYESQSSSFHVVVFDISATEIEYPAKSIRLDKVEEMVKI

XP_031737037.1 B3 domain-containing protein At4g01580-like [Cucumis sativus]2.08e-2865.56Show/hide
Query:  SSKMCLKVA-DGREWNLGLAKSNG--RVWFSD-GWQKFAEFYSLGFGHFLVFRYESQSSSFHVVVFDISATEIEYPAKSIRLDKVEEMVK
        ++++CLKVA DGR+WN+GL KSN   RVWF D GWQ F EFYS+G  +FLVF+YE QSSSF+VV+FD +ATEIEYP K I LD  EE VK
Subjt:  SSKMCLKVA-DGREWNLGLAKSNG--RVWFSD-GWQKFAEFYSLGFGHFLVFRYESQSSSFHVVVFDISATEIEYPAKSIRLDKVEEMVK

XP_038900379.1 B3 domain-containing transcription factor VRN1-like [Benincasa hispida]1.60e-3163.33Show/hide
Query:  LSSKMCLKVADGREWNLGLAKSNG--RVWFSDGWQKFAEFYSLGFGHFLVFRYESQSSSFHVVVFDISATEIEYPAKSIRLDKVEEMVKI
        ++++  LKVADG+EWN+GL KSN   RVWF  GWQ+F EFYSLG G+FLVF+YE++SSSF+VV+FD++A EIEYP K+IRLDK EE +++
Subjt:  LSSKMCLKVADGREWNLGLAKSNG--RVWFSDGWQKFAEFYSLGFGHFLVFRYESQSSSFHVVVFDISATEIEYPAKSIRLDKVEEMVKI

TrEMBL top hitse value%identityAlignment
A0A0A0LJV0 Uncharacterized protein6.01e-2758.89Show/hide
Query:  LSSKMCLKVADGREWNLGLAKSNG--RVWFSDGWQKFAEFYSLGFGHFLVFRYESQSSSFHVVVFDISATEIEYPAKSIRLDKVEEMVKI
        L  ++CLKV DG+EWN+GL KSN   RVW   GW+K   FYS+  G+FLVF+YE+ S SF+VV+FD +ATEIEYP K  RLDK +E VK+
Subjt:  LSSKMCLKVADGREWNLGLAKSNG--RVWFSDGWQKFAEFYSLGFGHFLVFRYESQSSSFHVVVFDISATEIEYPAKSIRLDKVEEMVKI

A0A1S3C7C6 putative B3 domain-containing protein Os03g0621600 isoform X27.61e-2962.22Show/hide
Query:  LSSKMCLKVADGREWNLGLAKSNG--RVWFSDGWQKFAEFYSLGFGHFLVFRYESQSSSFHVVVFDISATEIEYPAKSIRLDKVEEMVKI
        L  ++CLKV DG+EWN+GL KSN   RVWF  GW+K  EFYS+  G+FLVF+YE+QSSS +VV+FD +ATEIEYP K I LDK +E VK+
Subjt:  LSSKMCLKVADGREWNLGLAKSNG--RVWFSDGWQKFAEFYSLGFGHFLVFRYESQSSSFHVVVFDISATEIEYPAKSIRLDKVEEMVKI

A0A1S4E1Q2 uncharacterized protein LOC103497524 isoform X11.50e-2862.22Show/hide
Query:  LSSKMCLKVADGREWNLGLAKSNG--RVWFSDGWQKFAEFYSLGFGHFLVFRYESQSSSFHVVVFDISATEIEYPAKSIRLDKVEEMVKI
        L  ++CLKV DG+EWN+GL KSN   RVWF  GW+K  EFYS+  G+FLVF+YE+QSSS +VV+FD +ATEIEYP K I LDK +E VK+
Subjt:  LSSKMCLKVADGREWNLGLAKSNG--RVWFSDGWQKFAEFYSLGFGHFLVFRYESQSSSFHVVVFDISATEIEYPAKSIRLDKVEEMVKI

A0A5D3CPB8 Putative B3 domain-containing protein1.65e-2962.22Show/hide
Query:  LSSKMCLKVADGREWNLGLAKSNG--RVWFSDGWQKFAEFYSLGFGHFLVFRYESQSSSFHVVVFDISATEIEYPAKSIRLDKVEEMVKI
        L  ++CLKV DG+EWN+GL KSN   RVWF  GW+K  EFYS+  G+FLVF+YE+QSSS +VV+FD +ATEIEYP K I LDK +E VK+
Subjt:  LSSKMCLKVADGREWNLGLAKSNG--RVWFSDGWQKFAEFYSLGFGHFLVFRYESQSSSFHVVVFDISATEIEYPAKSIRLDKVEEMVKI

A0A6J1DYT9 B3 domain-containing transcription factor VRN1-like4.44e-51100Show/hide
Query:  LSSKMCLKVADGREWNLGLAKSNGRVWFSDGWQKFAEFYSLGFGHFLVFRYESQSSSFHVVVFDISATEIEYPAKSIRLDKVEEMVKI
        LSSKMCLKVADGREWNLGLAKSNGRVWFSDGWQKFAEFYSLGFGHFLVFRYESQSSSFHVVVFDISATEIEYPAKSIRLDKVEEMVKI
Subjt:  LSSKMCLKVADGREWNLGLAKSNGRVWFSDGWQKFAEFYSLGFGHFLVFRYESQSSSFHVVVFDISATEIEYPAKSIRLDKVEEMVKI

SwissProt top hitse value%identityAlignment
Q10GM3 B3 domain-containing protein Os03g06222003.4e-0535.14Show/hide
Query:  LSSKMCLKVADGREWNLGLAKSN-GRVWFSDGWQKFAEFYSLGFGHFLVFRYESQSSSFHVVVFDISATEIEYP
        +S ++ L+   G  W++G+A S+ G +    GW++F +   +  G  L+FRY   SSSF V++FD S  E   P
Subjt:  LSSKMCLKVADGREWNLGLAKSN-GRVWFSDGWQKFAEFYSLGFGHFLVFRYESQSSSFHVVVFDISATEIEYP

Q84R27 B3 domain-containing protein At3g189601.0e-0934.83Show/hide
Query:  LSSKMCLKVADGREWNLGLAKSNGRVWFSDGWQKFAEFYSLGFGHFLVFRYESQSSSFHVVVFDISATEIEYPAKSIR-LDKVEEMVKI
        LS  + L+   G + ++ L +    +WF +GW +FAE +S+  GHFL+F Y+ ++SSF V++F++SA E +YP  ++  +D  ++++ I
Subjt:  LSSKMCLKVADGREWNLGLAKSNGRVWFSDGWQKFAEFYSLGFGHFLVFRYESQSSSFHVVVFDISATEIEYPAKSIR-LDKVEEMVKI

Q8L3W1 B3 domain-containing transcription factor VRN15.8e-1345.83Show/hide
Query:  LSSKMCLKVADGREWNLGLAKSNGRVWFSDGWQKFAEFYSLGFGHFLVFRYESQSSSFHVVVFDISATEIEY
        LS  + L V DG  W +GL K++ ++WF DGWQ+F + YS+  G+ L+FRYE  +S+F V +F++S +EI Y
Subjt:  LSSKMCLKVADGREWNLGLAKSNGRVWFSDGWQKFAEFYSLGFGHFLVFRYESQSSSFHVVVFDISATEIEY

Q9XIB4 B3 domain-containing protein At1g494751.6e-1045.21Show/hide
Query:  LSSKMCLKVADGREWNLGLAKSNGRVWFSDGWQKFAEFYSLGFGHFLVFRYESQSSSFHVVVFDISATEIEYP
        L+  + L+   G + ++ + +    VWF  GW +FAE +SL  GHFL F YE   S F VV+FD+SA+EIEYP
Subjt:  LSSKMCLKVADGREWNLGLAKSNGRVWFSDGWQKFAEFYSLGFGHFLVFRYESQSSSFHVVVFDISATEIEYP

Q9ZSH7 B3 domain-containing protein At4g015805.1e-0934.83Show/hide
Query:  LSSKMCLKVADGREWNLGLAKSNGRVWFSDGWQKFAEFYSLGFGHFLVFRYESQSSSFHVVVFDISATEIEYPAKSIR-LDKVEEMVKI
        LS  + L    G + ++ L +    +WF +GW +FAE +S+  GHFL+F Y+ ++SSF V++F+ SA E  YP  ++  +D  +++++I
Subjt:  LSSKMCLKVADGREWNLGLAKSNGRVWFSDGWQKFAEFYSLGFGHFLVFRYESQSSSFHVVVFDISATEIEYPAKSIR-LDKVEEMVKI

Arabidopsis top hitse value%identityAlignment
AT1G49475.1 AP2/B3-like transcriptional factor family protein1.1e-1145.21Show/hide
Query:  LSSKMCLKVADGREWNLGLAKSNGRVWFSDGWQKFAEFYSLGFGHFLVFRYESQSSSFHVVVFDISATEIEYP
        L+  + L+   G + ++ + +    VWF  GW +FAE +SL  GHFL F YE   S F VV+FD+SA+EIEYP
Subjt:  LSSKMCLKVADGREWNLGLAKSNGRVWFSDGWQKFAEFYSLGFGHFLVFRYESQSSSFHVVVFDISATEIEYP

AT3G18960.1 AP2/B3-like transcriptional factor family protein7.3e-1134.83Show/hide
Query:  LSSKMCLKVADGREWNLGLAKSNGRVWFSDGWQKFAEFYSLGFGHFLVFRYESQSSSFHVVVFDISATEIEYPAKSIR-LDKVEEMVKI
        LS  + L+   G + ++ L +    +WF +GW +FAE +S+  GHFL+F Y+ ++SSF V++F++SA E +YP  ++  +D  ++++ I
Subjt:  LSSKMCLKVADGREWNLGLAKSNGRVWFSDGWQKFAEFYSLGFGHFLVFRYESQSSSFHVVVFDISATEIEYPAKSIR-LDKVEEMVKI

AT3G18990.1 AP2/B3-like transcriptional factor family protein4.1e-1445.83Show/hide
Query:  LSSKMCLKVADGREWNLGLAKSNGRVWFSDGWQKFAEFYSLGFGHFLVFRYESQSSSFHVVVFDISATEIEY
        LS  + L V DG  W +GL K++ ++WF DGWQ+F + YS+  G+ L+FRYE  +S+F V +F++S +EI Y
Subjt:  LSSKMCLKVADGREWNLGLAKSNGRVWFSDGWQKFAEFYSLGFGHFLVFRYESQSSSFHVVVFDISATEIEY

AT4G01580.1 AP2/B3-like transcriptional factor family protein3.6e-1034.83Show/hide
Query:  LSSKMCLKVADGREWNLGLAKSNGRVWFSDGWQKFAEFYSLGFGHFLVFRYESQSSSFHVVVFDISATEIEYPAKSIR-LDKVEEMVKI
        LS  + L    G + ++ L +    +WF +GW +FAE +S+  GHFL+F Y+ ++SSF V++F+ SA E  YP  ++  +D  +++++I
Subjt:  LSSKMCLKVADGREWNLGLAKSNGRVWFSDGWQKFAEFYSLGFGHFLVFRYESQSSSFHVVVFDISATEIEYPAKSIR-LDKVEEMVKI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTGAGCAGCAAAATGTGTCTTAAGGTTGCTGATGGCCGAGAGTGGAATTTGGGTTTGGCCAAAAGTAATGGAAGGGTTTGGTTTTCTGATGGATGGCAAAAGTTTGCAGA
GTTTTACTCTCTTGGATTCGGACACTTTCTAGTGTTTCGATATGAAAGTCAATCTTCCAGCTTTCACGTCGTCGTCTTCGATATCAGTGCTACGGAAATCGAGTATCCTG
CGAAGAGTATTCGTCTCGATAAGGTTGAGGAAATGGTGAAGATA
mRNA sequenceShow/hide mRNA sequence
TTGAGCAGCAAAATGTGTCTTAAGGTTGCTGATGGCCGAGAGTGGAATTTGGGTTTGGCCAAAAGTAATGGAAGGGTTTGGTTTTCTGATGGATGGCAAAAGTTTGCAGA
GTTTTACTCTCTTGGATTCGGACACTTTCTAGTGTTTCGATATGAAAGTCAATCTTCCAGCTTTCACGTCGTCGTCTTCGATATCAGTGCTACGGAAATCGAGTATCCTG
CGAAGAGTATTCGTCTCGATAAGGTTGAGGAAATGGTGAAGATA
Protein sequenceShow/hide protein sequence
LSSKMCLKVADGREWNLGLAKSNGRVWFSDGWQKFAEFYSLGFGHFLVFRYESQSSSFHVVVFDISATEIEYPAKSIRLDKVEEMVKI