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MC02g1165 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC02g1165
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionB3 domain-containing protein
Genome locationMC02:10210870..10211169
RNA-Seq ExpressionMC02g1165
SyntenyMC02g1165
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0016020 - membrane (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR003340 - B3 DNA binding domain
IPR015300 - DNA-binding pseudobarrel domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045855.1 putative B3 domain-containing protein [Cucumis melo var. makuwa]6.06e-3461.76Show/hide
Query:  IPTKFVREYGVQALLSSKTCLKVADGREWNVGLAKSDG--RVWFDDGWQKFVEFYSIGLEDFLMFRYERKPSSFRVVIFDNSTMEIEYPVKRIRLDRADG
        IP KFVREYG+QALL  + CLKV DG+EWNVGL KS+   RVWF  GW+K VEFYS+    FL+F+YE + SS  VVIFD +  EIEYPVK+I LD++  
Subjt:  IPTKFVREYGVQALLSSKTCLKVADGREWNVGLAKSDG--RVWFDDGWQKFVEFYSIGLEDFLMFRYERKPSSFRVVIFDNSTMEIEYPVKRIRLDRADG

Query:  RV
        RV
Subjt:  RV

XP_008457959.1 PREDICTED: putative B3 domain-containing protein Os03g0621600 isoform X2 [Cucumis melo]3.21e-3361.76Show/hide
Query:  IPTKFVREYGVQALLSSKTCLKVADGREWNVGLAKSDG--RVWFDDGWQKFVEFYSIGLEDFLMFRYERKPSSFRVVIFDNSTMEIEYPVKRIRLDRADG
        IP KFVREYG+QALL  + CLKV DG+EWNVGL KS+   RVWF  GW+K VEFYS+    FL+F+YE + SS  VVIFD +  EIEYPVK+I LD++  
Subjt:  IPTKFVREYGVQALLSSKTCLKVADGREWNVGLAKSDG--RVWFDDGWQKFVEFYSIGLEDFLMFRYERKPSSFRVVIFDNSTMEIEYPVKRIRLDRADG

Query:  RV
        RV
Subjt:  RV

XP_022158239.1 B3 domain-containing transcription factor VRN1-like [Momordica charantia]2.01e-61100Show/hide
Query:  IPTKFVREYGVQALLSSKTCLKVADGREWNVGLAKSDGRVWFDDGWQKFVEFYSIGLEDFLMFRYERKPSSFRVVIFDNSTMEIEYPVKRIRLDRADGRV
        IPTKFVREYGVQALLSSKTCLKVADGREWNVGLAKSDGRVWFDDGWQKFVEFYSIGLEDFLMFRYERKPSSFRVVIFDNSTMEIEYPVKRIRLDRADGRV
Subjt:  IPTKFVREYGVQALLSSKTCLKVADGREWNVGLAKSDGRVWFDDGWQKFVEFYSIGLEDFLMFRYERKPSSFRVVIFDNSTMEIEYPVKRIRLDRADGRV

XP_031737037.1 B3 domain-containing protein At4g01580-like [Cucumis sativus]1.76e-3567.31Show/hide
Query:  IPTKFVREYGVQALLSSKTCLKVA-DGREWNVGLAKS-DG-RVWFDD-GWQKFVEFYSIGLEDFLMFRYERKPSSFRVVIFDNSTMEIEYPVKRIRLDRA
        IPTKFVREYGV+A  +++ CLKVA DGR+WNVGL KS DG RVWF D GWQ FVEFYS+GLE FL+F+YE + SSF VVIFD +  EIEYP+K I LD A
Subjt:  IPTKFVREYGVQALLSSKTCLKVA-DGREWNVGLAKS-DG-RVWFDD-GWQKFVEFYSIGLEDFLMFRYERKPSSFRVVIFDNSTMEIEYPVKRIRLDRA

Query:  DGRV
        + +V
Subjt:  DGRV

XP_038900379.1 B3 domain-containing transcription factor VRN1-like [Benincasa hispida]8.77e-3662.75Show/hide
Query:  IPTKFVREYGVQALLSSKTCLKVADGREWNVGLAKSDG--RVWFDDGWQKFVEFYSIGLEDFLMFRYERKPSSFRVVIFDNSTMEIEYPVKRIRLDRADG
        IP KFVREYG +A ++++T LKVADG+EWN+GL KS+   RVWF  GWQ+FVEFYS+GL  FL+F+YE + SSF VVIFD + MEIEYPVK IRLD+ + 
Subjt:  IPTKFVREYGVQALLSSKTCLKVADGREWNVGLAKSDG--RVWFDDGWQKFVEFYSIGLEDFLMFRYERKPSSFRVVIFDNSTMEIEYPVKRIRLDRADG

Query:  RV
        ++
Subjt:  RV

TrEMBL top hitse value%identityAlignment
A0A1S3C7C6 putative B3 domain-containing protein Os03g0621600 isoform X21.55e-3361.76Show/hide
Query:  IPTKFVREYGVQALLSSKTCLKVADGREWNVGLAKSDG--RVWFDDGWQKFVEFYSIGLEDFLMFRYERKPSSFRVVIFDNSTMEIEYPVKRIRLDRADG
        IP KFVREYG+QALL  + CLKV DG+EWNVGL KS+   RVWF  GW+K VEFYS+    FL+F+YE + SS  VVIFD +  EIEYPVK+I LD++  
Subjt:  IPTKFVREYGVQALLSSKTCLKVADGREWNVGLAKSDG--RVWFDDGWQKFVEFYSIGLEDFLMFRYERKPSSFRVVIFDNSTMEIEYPVKRIRLDRADG

Query:  RV
        RV
Subjt:  RV

A0A1S4E1Q2 uncharacterized protein LOC103497524 isoform X13.35e-3361.76Show/hide
Query:  IPTKFVREYGVQALLSSKTCLKVADGREWNVGLAKSDG--RVWFDDGWQKFVEFYSIGLEDFLMFRYERKPSSFRVVIFDNSTMEIEYPVKRIRLDRADG
        IP KFVREYG+QALL  + CLKV DG+EWNVGL KS+   RVWF  GW+K VEFYS+    FL+F+YE + SS  VVIFD +  EIEYPVK+I LD++  
Subjt:  IPTKFVREYGVQALLSSKTCLKVADGREWNVGLAKSDG--RVWFDDGWQKFVEFYSIGLEDFLMFRYERKPSSFRVVIFDNSTMEIEYPVKRIRLDRADG

Query:  RV
        RV
Subjt:  RV

A0A5D3CPB8 Putative B3 domain-containing protein2.93e-3461.76Show/hide
Query:  IPTKFVREYGVQALLSSKTCLKVADGREWNVGLAKSDG--RVWFDDGWQKFVEFYSIGLEDFLMFRYERKPSSFRVVIFDNSTMEIEYPVKRIRLDRADG
        IP KFVREYG+QALL  + CLKV DG+EWNVGL KS+   RVWF  GW+K VEFYS+    FL+F+YE + SS  VVIFD +  EIEYPVK+I LD++  
Subjt:  IPTKFVREYGVQALLSSKTCLKVADGREWNVGLAKSDG--RVWFDDGWQKFVEFYSIGLEDFLMFRYERKPSSFRVVIFDNSTMEIEYPVKRIRLDRADG

Query:  RV
        RV
Subjt:  RV

A0A6J1DYT9 B3 domain-containing transcription factor VRN1-like9.71e-62100Show/hide
Query:  IPTKFVREYGVQALLSSKTCLKVADGREWNVGLAKSDGRVWFDDGWQKFVEFYSIGLEDFLMFRYERKPSSFRVVIFDNSTMEIEYPVKRIRLDRADGRV
        IPTKFVREYGVQALLSSKTCLKVADGREWNVGLAKSDGRVWFDDGWQKFVEFYSIGLEDFLMFRYERKPSSFRVVIFDNSTMEIEYPVKRIRLDRADGRV
Subjt:  IPTKFVREYGVQALLSSKTCLKVADGREWNVGLAKSDGRVWFDDGWQKFVEFYSIGLEDFLMFRYERKPSSFRVVIFDNSTMEIEYPVKRIRLDRADGRV

A0A6J1I9C1 B3 domain-containing protein REM8-like isoform X21.64e-3264.44Show/hide
Query:  IPTKFVREYGVQALLSSKTCLKVADGREWNVGLAKSDGRVWFDDGWQKFVEFYSIGLEDFLMFRYERKPSSFRVVIFDNSTMEIEYPVKR
        IP KFV EYG++A  ++ T LKVADG EW VG+ KSDGRVWFD GWQKFVEFY++GLE FL+F+YE + S F VVIFD +  EI+YP+K+
Subjt:  IPTKFVREYGVQALLSSKTCLKVADGREWNVGLAKSDGRVWFDDGWQKFVEFYSIGLEDFLMFRYERKPSSFRVVIFDNSTMEIEYPVKR

SwissProt top hitse value%identityAlignment
Q10GM3 B3 domain-containing protein Os03g06222005.4e-0735.23Show/hide
Query:  IPTKFVREYGVQALLSSKTCLKVADGREWNVGLAKSD-GRVWFDDGWQKFVEFYSIGLEDFLMFRYERKPSSFRVVIFDNSTMEIEYP
        +P +F   +     +S +  L+   G  W++G+A SD G +    GW++FV+   I   D L+FRY    SSF V+IFD S  E   P
Subjt:  IPTKFVREYGVQALLSSKTCLKVADGREWNVGLAKSD-GRVWFDDGWQKFVEFYSIGLEDFLMFRYERKPSSFRVVIFDNSTMEIEYP

Q84R27 B3 domain-containing protein At3g189602.6e-0935.05Show/hide
Query:  IPTKFVREYGVQALLSSKTCLKVADGREWNVGLAKSDGRVWFDDGWQKFVEFYSIGLEDFLMFRYERKPSSFRVVIFDNSTMEIEYPVKRIRLDRAD
        IP +FV+  G  + LS    L+   G + ++ L +    +WF +GW +F E +SI    FL+F Y ++ SSFRV+IF+ S  E +YP+  + +  +D
Subjt:  IPTKFVREYGVQALLSSKTCLKVADGREWNVGLAKSDGRVWFDDGWQKFVEFYSIGLEDFLMFRYERKPSSFRVVIFDNSTMEIEYPVKRIRLDRAD

Q8L3W1 B3 domain-containing transcription factor VRN14.6e-1447.67Show/hide
Query:  IPTKFVREYGVQALLSSKTCLKVADGREWNVGLAKSDGRVWFDDGWQKFVEFYSIGLEDFLMFRYERKPSSFRVVIFDNSTMEIEY
        +P KFV ++  +  LS    L V DG  W VGL K+D ++WF DGWQ+FV+ YSI +   L+FRYE   S+F V IF+ S  EI Y
Subjt:  IPTKFVREYGVQALLSSKTCLKVADGREWNVGLAKSDGRVWFDDGWQKFVEFYSIGLEDFLMFRYERKPSSFRVVIFDNSTMEIEY

Q9XIB4 B3 domain-containing protein At1g494753.4e-0939.77Show/hide
Query:  IPTKFVREYGVQALLSSKTCLKVADGREWNVGLAKSDGRVWFDDGWQKFVEFYSIGLEDFLMFRYERKPSSFRVVIFDNSTMEIEYPV
        +P +FVR +G +  L+    L+   G + ++ + +    VWF+ GW +F E +S+    FL F YE   S FRVVIFD S  EIEYP+
Subjt:  IPTKFVREYGVQALLSSKTCLKVADGREWNVGLAKSDGRVWFDDGWQKFVEFYSIGLEDFLMFRYERKPSSFRVVIFDNSTMEIEYPV

Q9ZSH7 B3 domain-containing protein At4g015801.2e-0936Show/hide
Query:  IPTKFVREYGVQALLSSKTCLKVADGREWNVGLAKSDGRVWFDDGWQKFVEFYSIGLEDFLMFRYERKPSSFRVVIFDNSTMEIEYPVKRIRLDRADGRV
        IP +FV+  G  + LS    L    G + ++ L +    +WF +GW +F E +SI    FL+F Y +K SSFRV+IF+ S  E  YP+  + +  +D  V
Subjt:  IPTKFVREYGVQALLSSKTCLKVADGREWNVGLAKSDGRVWFDDGWQKFVEFYSIGLEDFLMFRYERKPSSFRVVIFDNSTMEIEYPVKRIRLDRADGRV

Arabidopsis top hitse value%identityAlignment
AT1G49475.1 AP2/B3-like transcriptional factor family protein2.4e-1039.77Show/hide
Query:  IPTKFVREYGVQALLSSKTCLKVADGREWNVGLAKSDGRVWFDDGWQKFVEFYSIGLEDFLMFRYERKPSSFRVVIFDNSTMEIEYPV
        +P +FVR +G +  L+    L+   G + ++ + +    VWF+ GW +F E +S+    FL F YE   S FRVVIFD S  EIEYP+
Subjt:  IPTKFVREYGVQALLSSKTCLKVADGREWNVGLAKSDGRVWFDDGWQKFVEFYSIGLEDFLMFRYERKPSSFRVVIFDNSTMEIEYPV

AT3G18960.1 AP2/B3-like transcriptional factor family protein1.8e-1035.05Show/hide
Query:  IPTKFVREYGVQALLSSKTCLKVADGREWNVGLAKSDGRVWFDDGWQKFVEFYSIGLEDFLMFRYERKPSSFRVVIFDNSTMEIEYPVKRIRLDRAD
        IP +FV+  G  + LS    L+   G + ++ L +    +WF +GW +F E +SI    FL+F Y ++ SSFRV+IF+ S  E +YP+  + +  +D
Subjt:  IPTKFVREYGVQALLSSKTCLKVADGREWNVGLAKSDGRVWFDDGWQKFVEFYSIGLEDFLMFRYERKPSSFRVVIFDNSTMEIEYPVKRIRLDRAD

AT3G18990.1 AP2/B3-like transcriptional factor family protein3.2e-1547.67Show/hide
Query:  IPTKFVREYGVQALLSSKTCLKVADGREWNVGLAKSDGRVWFDDGWQKFVEFYSIGLEDFLMFRYERKPSSFRVVIFDNSTMEIEY
        +P KFV ++  +  LS    L V DG  W VGL K+D ++WF DGWQ+FV+ YSI +   L+FRYE   S+F V IF+ S  EI Y
Subjt:  IPTKFVREYGVQALLSSKTCLKVADGREWNVGLAKSDGRVWFDDGWQKFVEFYSIGLEDFLMFRYERKPSSFRVVIFDNSTMEIEY

AT4G01580.1 AP2/B3-like transcriptional factor family protein8.2e-1136Show/hide
Query:  IPTKFVREYGVQALLSSKTCLKVADGREWNVGLAKSDGRVWFDDGWQKFVEFYSIGLEDFLMFRYERKPSSFRVVIFDNSTMEIEYPVKRIRLDRADGRV
        IP +FV+  G  + LS    L    G + ++ L +    +WF +GW +F E +SI    FL+F Y +K SSFRV+IF+ S  E  YP+  + +  +D  V
Subjt:  IPTKFVREYGVQALLSSKTCLKVADGREWNVGLAKSDGRVWFDDGWQKFVEFYSIGLEDFLMFRYERKPSSFRVVIFDNSTMEIEYPVKRIRLDRADGRV

AT4G33280.1 AP2/B3-like transcriptional factor family protein1.5e-0433.73Show/hide
Query:  IPTKFVREYGVQALLSSKTCLKVADGREWNVGLAKSDGRVW-FDDGWQKFVEFYSIGLEDFLMFRYERKPSSFRVVIFDNSTM
        IP KF      +  L     LK   G  +NVG+ + D +   F  GW KFV+ +S+   D L+F++    S F V++FD  T+
Subjt:  IPTKFVREYGVQALLSSKTCLKVADGREWNVGLAKSDGRVW-FDDGWQKFVEFYSIGLEDFLMFRYERKPSSFRVVIFDNSTM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATCCCAACAAAATTTGTGAGAGAATATGGGGTGCAAGCCTTGTTAAGCAGCAAAACGTGTCTTAAGGTGGCCGATGGCCGAGAGTGGAATGTGGGTTTGGCCAAAAGTGA
TGGAAGGGTCTGGTTTGATGATGGGTGGCAGAAGTTTGTAGAGTTTTACTCCATTGGATTGGAAGACTTTCTAATGTTTCGATACGAAAGGAAACCTTCGAGCTTTCGTG
TCGTCATCTTCGATAACAGCACTATGGAAATCGAGTATCCTGTGAAGAGAATTCGTCTTGATAGAGCTGATGGAAGGGTG
mRNA sequenceShow/hide mRNA sequence
ATCCCAACAAAATTTGTGAGAGAATATGGGGTGCAAGCCTTGTTAAGCAGCAAAACGTGTCTTAAGGTGGCCGATGGCCGAGAGTGGAATGTGGGTTTGGCCAAAAGTGA
TGGAAGGGTCTGGTTTGATGATGGGTGGCAGAAGTTTGTAGAGTTTTACTCCATTGGATTGGAAGACTTTCTAATGTTTCGATACGAAAGGAAACCTTCGAGCTTTCGTG
TCGTCATCTTCGATAACAGCACTATGGAAATCGAGTATCCTGTGAAGAGAATTCGTCTTGATAGAGCTGATGGAAGGGTG
Protein sequenceShow/hide protein sequence
IPTKFVREYGVQALLSSKTCLKVADGREWNVGLAKSDGRVWFDDGWQKFVEFYSIGLEDFLMFRYERKPSSFRVVIFDNSTMEIEYPVKRIRLDRADGRV