; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC02g1185 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC02g1185
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionupstream activation factor subunit UAF30-like
Genome locationMC02:10510981..10520783
RNA-Seq ExpressionMC02g1185
SyntenyMC02g1185
Gene Ontology termsGO:0005634 - nucleus (cellular component)
InterPro domainsIPR003121 - SWIB/MDM2 domain
IPR014876 - DEK, C-terminal
IPR019835 - SWIB domain
IPR036885 - SWIB/MDM2 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004148436.1 upstream activation factor subunit UAF30 [Cucumis sativus]1.77e-17579.83Show/hide
Query:  MVSDSELIGRLREFLRNSDLNTTTTTIVRRMLEEEFNVDLLDKKLFIREQVDLFLRTEHEAA--------EEADQEDGDGNLKTEEEDGDSEDGENDDDD
        MVSDSELI RLR+FLRNSDLNTTTT IVRR LEE+F +DL DKKLFIREQVDLFL+TEHE A        EE  QEDGD NLK E EDGDSEDG+ND++D
Subjt:  MVSDSELIGRLREFLRNSDLNTTTTTIVRRMLEEEFNVDLLDKKLFIREQVDLFLRTEHEAA--------EEADQEDGDGNLKTEEEDGDSEDGENDDDD

Query:  DEKGKTSSNKLSKEVKKRGGGFSKLCSLSPQLQEFTGVPEMARTEVVKQLWIHIRENNLQDPSNRRNIICDEPLKALFGVNSINMFQMNKALSKHIWPLE
        DEKGKTSS K    VKKRGGGF+KLCSLSPQLQEF G PEMARTEVVKQLW HIRENNLQDPSNRRNI+CDEPLKALFGVNSINMFQMNKALSKHIWPLE
Subjt:  DEKGKTSSNKLSKEVKKRGGGFSKLCSLSPQLQEFTGVPEMARTEVVKQLWIHIRENNLQDPSNRRNIICDEPLKALFGVNSINMFQMNKALSKHIWPLE

Query:  SNDVIPAKSSQKE------QPKEKPQKKRQKQGKEEMPKKKRQKQAKEDSDEAAREEKQQKKGKSGFLAPLPLSDALVTFFGTGEDALSRAEVVKRMWDY
        SNDVIPAKSSQKE      QPKEKPQKKRQKQGKEE            DSD++ARE+K+QKKGKSGFLAPLPLS+ALV F GTGEDAL R++VVKRMWDY
Subjt:  SNDVIPAKSSQKE------QPKEKPQKKRQKQGKEEMPKKKRQKQAKEDSDEAAREEKQQKKGKSGFLAPLPLSDALVTFFGTGEDALSRAEVVKRMWDY

Query:  IKQNNLQDPSDKRRIICDEKLKELFDVESFHGFTVSKLLAPHFVKTK
        IKQNNLQDPSDKRRIICDE+LKELFDV+SF+GFTVSKLLA HF+K K
Subjt:  IKQNNLQDPSDKRRIICDEKLKELFDVESFHGFTVSKLLAPHFVKTK

XP_008457882.1 PREDICTED: upstream activation factor subunit UAF30-like [Cucumis melo]3.07e-17680.12Show/hide
Query:  MVSDSELIGRLREFLRNSDLNTTTTTIVRRMLEEEFNVDLLDKKLFIREQVDLFLRTEHEAA--------EEADQEDGDGNLKTEEEDGDSEDGENDDDD
        MVSDSELIGRLR+FLRNSDLNTTTT IVRR LEE+F +DL DKK FIREQVDLFL+TEHE A        EE +QEDGD NLK E EDGDSEDG+NDD+D
Subjt:  MVSDSELIGRLREFLRNSDLNTTTTTIVRRMLEEEFNVDLLDKKLFIREQVDLFLRTEHEAA--------EEADQEDGDGNLKTEEEDGDSEDGENDDDD

Query:  DEKGKTSSNKLSKEVKKRGGGFSKLCSLSPQLQEFTGVPEMARTEVVKQLWIHIRENNLQDPSNRRNIICDEPLKALFGVNSINMFQMNKALSKHIWPLE
        DEKGKTSS+K     KKRGGGFSKLCSLSPQLQEF G  EMARTEVVKQLW HIRENNLQDPSNRRNI+CDEPLKALFGVNSINMFQMNKALSKHIWPLE
Subjt:  DEKGKTSSNKLSKEVKKRGGGFSKLCSLSPQLQEFTGVPEMARTEVVKQLWIHIRENNLQDPSNRRNIICDEPLKALFGVNSINMFQMNKALSKHIWPLE

Query:  SNDVIPAKSSQKE------QPKEKPQKKRQKQGKEEMPKKKRQKQAKEDSDEAAREEKQQKKGKSGFLAPLPLSDALVTFFGTGEDALSRAEVVKRMWDY
        SNDVIPAKSSQKE      QPKEKPQKKRQKQGKEE            DSD++ARE+K+QKKGKSGFLAPLPLSDALV F GTGEDAL R++VVKRMWDY
Subjt:  SNDVIPAKSSQKE------QPKEKPQKKRQKQGKEEMPKKKRQKQAKEDSDEAAREEKQQKKGKSGFLAPLPLSDALVTFFGTGEDALSRAEVVKRMWDY

Query:  IKQNNLQDPSDKRRIICDEKLKELFDVESFHGFTVSKLLAPHFVKTK
        IKQNNLQDPSDKRRIICDE+LKELFDV+SF+GFTVSKLLA HF+K K
Subjt:  IKQNNLQDPSDKRRIICDEKLKELFDVESFHGFTVSKLLAPHFVKTK

XP_022155470.1 upstream activation factor subunit spp27-like isoform X1 [Momordica charantia]4.94e-227100Show/hide
Query:  MVSDSELIGRLREFLRNSDLNTTTTTIVRRMLEEEFNVDLLDKKLFIREQVDLFLRTEHEAAEEADQEDGDGNLKTEEEDGDSEDGENDDDDDEKGKTSS
        MVSDSELIGRLREFLRNSDLNTTTTTIVRRMLEEEFNVDLLDKKLFIREQVDLFLRTEHEAAEEADQEDGDGNLKTEEEDGDSEDGENDDDDDEKGKTSS
Subjt:  MVSDSELIGRLREFLRNSDLNTTTTTIVRRMLEEEFNVDLLDKKLFIREQVDLFLRTEHEAAEEADQEDGDGNLKTEEEDGDSEDGENDDDDDEKGKTSS

Query:  NKLSKEVKKRGGGFSKLCSLSPQLQEFTGVPEMARTEVVKQLWIHIRENNLQDPSNRRNIICDEPLKALFGVNSINMFQMNKALSKHIWPLESNDVIPAK
        NKLSKEVKKRGGGFSKLCSLSPQLQEFTGVPEMARTEVVKQLWIHIRENNLQDPSNRRNIICDEPLKALFGVNSINMFQMNKALSKHIWPLESNDVIPAK
Subjt:  NKLSKEVKKRGGGFSKLCSLSPQLQEFTGVPEMARTEVVKQLWIHIRENNLQDPSNRRNIICDEPLKALFGVNSINMFQMNKALSKHIWPLESNDVIPAK

Query:  SSQKEQPKEKPQKKRQKQGKEEMPKKKRQKQAKEDSDEAAREEKQQKKGKSGFLAPLPLSDALVTFFGTGEDALSRAEVVKRMWDYIKQNNLQDPSDKRR
        SSQKEQPKEKPQKKRQKQGKEEMPKKKRQKQAKEDSDEAAREEKQQKKGKSGFLAPLPLSDALVTFFGTGEDALSRAEVVKRMWDYIKQNNLQDPSDKRR
Subjt:  SSQKEQPKEKPQKKRQKQGKEEMPKKKRQKQAKEDSDEAAREEKQQKKGKSGFLAPLPLSDALVTFFGTGEDALSRAEVVKRMWDYIKQNNLQDPSDKRR

Query:  IICDEKLKELFDVESFHGFTVSKLLAPHFVKTKYKRI
        IICDEKLKELFDVESFHGFTVSKLLAPHFVKTKYKRI
Subjt:  IICDEKLKELFDVESFHGFTVSKLLAPHFVKTKYKRI

XP_022155471.1 upstream activation factor subunit spp27-like isoform X2 [Momordica charantia]6.75e-224100Show/hide
Query:  MVSDSELIGRLREFLRNSDLNTTTTTIVRRMLEEEFNVDLLDKKLFIREQVDLFLRTEHEAAEEADQEDGDGNLKTEEEDGDSEDGENDDDDDEKGKTSS
        MVSDSELIGRLREFLRNSDLNTTTTTIVRRMLEEEFNVDLLDKKLFIREQVDLFLRTEHEAAEEADQEDGDGNLKTEEEDGDSEDGENDDDDDEKGKTSS
Subjt:  MVSDSELIGRLREFLRNSDLNTTTTTIVRRMLEEEFNVDLLDKKLFIREQVDLFLRTEHEAAEEADQEDGDGNLKTEEEDGDSEDGENDDDDDEKGKTSS

Query:  NKLSKEVKKRGGGFSKLCSLSPQLQEFTGVPEMARTEVVKQLWIHIRENNLQDPSNRRNIICDEPLKALFGVNSINMFQMNKALSKHIWPLESNDVIPAK
        NKLSKEVKKRGGGFSKLCSLSPQLQEFTGVPEMARTEVVKQLWIHIRENNLQDPSNRRNIICDEPLKALFGVNSINMFQMNKALSKHIWPLESNDVIPAK
Subjt:  NKLSKEVKKRGGGFSKLCSLSPQLQEFTGVPEMARTEVVKQLWIHIRENNLQDPSNRRNIICDEPLKALFGVNSINMFQMNKALSKHIWPLESNDVIPAK

Query:  SSQKEQPKEKPQKKRQKQGKEEMPKKKRQKQAKEDSDEAAREEKQQKKGKSGFLAPLPLSDALVTFFGTGEDALSRAEVVKRMWDYIKQNNLQDPSDKRR
        SSQKEQPKEKPQKKRQKQGKEEMPKKKRQKQAKEDSDEAAREEKQQKKGKSGFLAPLPLSDALVTFFGTGEDALSRAEVVKRMWDYIKQNNLQDPSDKRR
Subjt:  SSQKEQPKEKPQKKRQKQGKEEMPKKKRQKQAKEDSDEAAREEKQQKKGKSGFLAPLPLSDALVTFFGTGEDALSRAEVVKRMWDYIKQNNLQDPSDKRR

Query:  IICDEKLKELFDVESFHGFTVSKLLAPHFVKTK
        IICDEKLKELFDVESFHGFTVSKLLAPHFVKTK
Subjt:  IICDEKLKELFDVESFHGFTVSKLLAPHFVKTK

XP_038901460.1 upstream activation factor subunit spp27-like isoform X1 [Benincasa hispida]7.52e-17880.75Show/hide
Query:  MVSDSELIGRLREFLRNSDLNTTTTTIVRRMLEEEFNVDLLDKKLFIREQVDLFLRTEHEAA--------EEADQEDGDGNLKTEEEDGDSEDGENDDDD
        MVSDSELIGRLREFLRNSDLNTTTT IVRR LEE+F +DL DKK FIREQVD+FL+TEHE A        EE DQE GD NLKTEE+DGDSEDG+NDD+D
Subjt:  MVSDSELIGRLREFLRNSDLNTTTTTIVRRMLEEEFNVDLLDKKLFIREQVDLFLRTEHEAA--------EEADQEDGDGNLKTEEEDGDSEDGENDDDD

Query:  DEKGKTSSNKLSKEVKKRGGG-FSKLCSLSPQLQEFTGVPEMARTEVVKQLWIHIRENNLQDPSNRRNIICDEPLKALFGVNSINMFQMNKALSKHIWPL
        DEKGK  SNKLSKE KKRGGG FSKLCSLSPQLQEF G PEMARTEVVKQLW HIR  NLQDPSNRRNI+CD+ LKALFGVNSINMFQMNKALSKHIWPL
Subjt:  DEKGKTSSNKLSKEVKKRGGG-FSKLCSLSPQLQEFTGVPEMARTEVVKQLWIHIRENNLQDPSNRRNIICDEPLKALFGVNSINMFQMNKALSKHIWPL

Query:  ESNDVIPAKSSQKE------QPKEKPQKKRQKQGKEEMPKKKRQKQAKEDSDEAAREEKQQKKGKSGFLAPLPLSDALVTFFGTGEDALSRAEVVKRMWD
        ESNDVIPA SSQKE      QPKEKPQKKRQKQGKEE            DSD++AREEK+QKKGKSGFLAPL LSDALVTF GTGEDAL R++VVKRMWD
Subjt:  ESNDVIPAKSSQKE------QPKEKPQKKRQKQGKEEMPKKKRQKQAKEDSDEAAREEKQQKKGKSGFLAPLPLSDALVTFFGTGEDALSRAEVVKRMWD

Query:  YIKQNNLQDPSDKRRIICDEKLKELFDVESFHGFTVSKLLAPHFVKTK
        YIKQNNLQDPSDKRRIICDE+LKELFDV+SFHGFTVSKLLA HF+KTK
Subjt:  YIKQNNLQDPSDKRRIICDEKLKELFDVESFHGFTVSKLLAPHFVKTK

TrEMBL top hitse value%identityAlignment
A0A0A0LJW7 Uncharacterized protein8.58e-17679.83Show/hide
Query:  MVSDSELIGRLREFLRNSDLNTTTTTIVRRMLEEEFNVDLLDKKLFIREQVDLFLRTEHEAA--------EEADQEDGDGNLKTEEEDGDSEDGENDDDD
        MVSDSELI RLR+FLRNSDLNTTTT IVRR LEE+F +DL DKKLFIREQVDLFL+TEHE A        EE  QEDGD NLK E EDGDSEDG+ND++D
Subjt:  MVSDSELIGRLREFLRNSDLNTTTTTIVRRMLEEEFNVDLLDKKLFIREQVDLFLRTEHEAA--------EEADQEDGDGNLKTEEEDGDSEDGENDDDD

Query:  DEKGKTSSNKLSKEVKKRGGGFSKLCSLSPQLQEFTGVPEMARTEVVKQLWIHIRENNLQDPSNRRNIICDEPLKALFGVNSINMFQMNKALSKHIWPLE
        DEKGKTSS K    VKKRGGGF+KLCSLSPQLQEF G PEMARTEVVKQLW HIRENNLQDPSNRRNI+CDEPLKALFGVNSINMFQMNKALSKHIWPLE
Subjt:  DEKGKTSSNKLSKEVKKRGGGFSKLCSLSPQLQEFTGVPEMARTEVVKQLWIHIRENNLQDPSNRRNIICDEPLKALFGVNSINMFQMNKALSKHIWPLE

Query:  SNDVIPAKSSQKE------QPKEKPQKKRQKQGKEEMPKKKRQKQAKEDSDEAAREEKQQKKGKSGFLAPLPLSDALVTFFGTGEDALSRAEVVKRMWDY
        SNDVIPAKSSQKE      QPKEKPQKKRQKQGKEE            DSD++ARE+K+QKKGKSGFLAPLPLS+ALV F GTGEDAL R++VVKRMWDY
Subjt:  SNDVIPAKSSQKE------QPKEKPQKKRQKQGKEEMPKKKRQKQAKEDSDEAAREEKQQKKGKSGFLAPLPLSDALVTFFGTGEDALSRAEVVKRMWDY

Query:  IKQNNLQDPSDKRRIICDEKLKELFDVESFHGFTVSKLLAPHFVKTK
        IKQNNLQDPSDKRRIICDE+LKELFDV+SF+GFTVSKLLA HF+K K
Subjt:  IKQNNLQDPSDKRRIICDEKLKELFDVESFHGFTVSKLLAPHFVKTK

A0A1S3C766 upstream activation factor subunit UAF30-like1.49e-17680.12Show/hide
Query:  MVSDSELIGRLREFLRNSDLNTTTTTIVRRMLEEEFNVDLLDKKLFIREQVDLFLRTEHEAA--------EEADQEDGDGNLKTEEEDGDSEDGENDDDD
        MVSDSELIGRLR+FLRNSDLNTTTT IVRR LEE+F +DL DKK FIREQVDLFL+TEHE A        EE +QEDGD NLK E EDGDSEDG+NDD+D
Subjt:  MVSDSELIGRLREFLRNSDLNTTTTTIVRRMLEEEFNVDLLDKKLFIREQVDLFLRTEHEAA--------EEADQEDGDGNLKTEEEDGDSEDGENDDDD

Query:  DEKGKTSSNKLSKEVKKRGGGFSKLCSLSPQLQEFTGVPEMARTEVVKQLWIHIRENNLQDPSNRRNIICDEPLKALFGVNSINMFQMNKALSKHIWPLE
        DEKGKTSS+K     KKRGGGFSKLCSLSPQLQEF G  EMARTEVVKQLW HIRENNLQDPSNRRNI+CDEPLKALFGVNSINMFQMNKALSKHIWPLE
Subjt:  DEKGKTSSNKLSKEVKKRGGGFSKLCSLSPQLQEFTGVPEMARTEVVKQLWIHIRENNLQDPSNRRNIICDEPLKALFGVNSINMFQMNKALSKHIWPLE

Query:  SNDVIPAKSSQKE------QPKEKPQKKRQKQGKEEMPKKKRQKQAKEDSDEAAREEKQQKKGKSGFLAPLPLSDALVTFFGTGEDALSRAEVVKRMWDY
        SNDVIPAKSSQKE      QPKEKPQKKRQKQGKEE            DSD++ARE+K+QKKGKSGFLAPLPLSDALV F GTGEDAL R++VVKRMWDY
Subjt:  SNDVIPAKSSQKE------QPKEKPQKKRQKQGKEEMPKKKRQKQAKEDSDEAAREEKQQKKGKSGFLAPLPLSDALVTFFGTGEDALSRAEVVKRMWDY

Query:  IKQNNLQDPSDKRRIICDEKLKELFDVESFHGFTVSKLLAPHFVKTK
        IKQNNLQDPSDKRRIICDE+LKELFDV+SF+GFTVSKLLA HF+K K
Subjt:  IKQNNLQDPSDKRRIICDEKLKELFDVESFHGFTVSKLLAPHFVKTK

A0A6J1DMI3 upstream activation factor subunit spp27-like isoform X12.39e-227100Show/hide
Query:  MVSDSELIGRLREFLRNSDLNTTTTTIVRRMLEEEFNVDLLDKKLFIREQVDLFLRTEHEAAEEADQEDGDGNLKTEEEDGDSEDGENDDDDDEKGKTSS
        MVSDSELIGRLREFLRNSDLNTTTTTIVRRMLEEEFNVDLLDKKLFIREQVDLFLRTEHEAAEEADQEDGDGNLKTEEEDGDSEDGENDDDDDEKGKTSS
Subjt:  MVSDSELIGRLREFLRNSDLNTTTTTIVRRMLEEEFNVDLLDKKLFIREQVDLFLRTEHEAAEEADQEDGDGNLKTEEEDGDSEDGENDDDDDEKGKTSS

Query:  NKLSKEVKKRGGGFSKLCSLSPQLQEFTGVPEMARTEVVKQLWIHIRENNLQDPSNRRNIICDEPLKALFGVNSINMFQMNKALSKHIWPLESNDVIPAK
        NKLSKEVKKRGGGFSKLCSLSPQLQEFTGVPEMARTEVVKQLWIHIRENNLQDPSNRRNIICDEPLKALFGVNSINMFQMNKALSKHIWPLESNDVIPAK
Subjt:  NKLSKEVKKRGGGFSKLCSLSPQLQEFTGVPEMARTEVVKQLWIHIRENNLQDPSNRRNIICDEPLKALFGVNSINMFQMNKALSKHIWPLESNDVIPAK

Query:  SSQKEQPKEKPQKKRQKQGKEEMPKKKRQKQAKEDSDEAAREEKQQKKGKSGFLAPLPLSDALVTFFGTGEDALSRAEVVKRMWDYIKQNNLQDPSDKRR
        SSQKEQPKEKPQKKRQKQGKEEMPKKKRQKQAKEDSDEAAREEKQQKKGKSGFLAPLPLSDALVTFFGTGEDALSRAEVVKRMWDYIKQNNLQDPSDKRR
Subjt:  SSQKEQPKEKPQKKRQKQGKEEMPKKKRQKQAKEDSDEAAREEKQQKKGKSGFLAPLPLSDALVTFFGTGEDALSRAEVVKRMWDYIKQNNLQDPSDKRR

Query:  IICDEKLKELFDVESFHGFTVSKLLAPHFVKTKYKRI
        IICDEKLKELFDVESFHGFTVSKLLAPHFVKTKYKRI
Subjt:  IICDEKLKELFDVESFHGFTVSKLLAPHFVKTKYKRI

A0A6J1DPF6 upstream activation factor subunit spp27-like isoform X23.27e-224100Show/hide
Query:  MVSDSELIGRLREFLRNSDLNTTTTTIVRRMLEEEFNVDLLDKKLFIREQVDLFLRTEHEAAEEADQEDGDGNLKTEEEDGDSEDGENDDDDDEKGKTSS
        MVSDSELIGRLREFLRNSDLNTTTTTIVRRMLEEEFNVDLLDKKLFIREQVDLFLRTEHEAAEEADQEDGDGNLKTEEEDGDSEDGENDDDDDEKGKTSS
Subjt:  MVSDSELIGRLREFLRNSDLNTTTTTIVRRMLEEEFNVDLLDKKLFIREQVDLFLRTEHEAAEEADQEDGDGNLKTEEEDGDSEDGENDDDDDEKGKTSS

Query:  NKLSKEVKKRGGGFSKLCSLSPQLQEFTGVPEMARTEVVKQLWIHIRENNLQDPSNRRNIICDEPLKALFGVNSINMFQMNKALSKHIWPLESNDVIPAK
        NKLSKEVKKRGGGFSKLCSLSPQLQEFTGVPEMARTEVVKQLWIHIRENNLQDPSNRRNIICDEPLKALFGVNSINMFQMNKALSKHIWPLESNDVIPAK
Subjt:  NKLSKEVKKRGGGFSKLCSLSPQLQEFTGVPEMARTEVVKQLWIHIRENNLQDPSNRRNIICDEPLKALFGVNSINMFQMNKALSKHIWPLESNDVIPAK

Query:  SSQKEQPKEKPQKKRQKQGKEEMPKKKRQKQAKEDSDEAAREEKQQKKGKSGFLAPLPLSDALVTFFGTGEDALSRAEVVKRMWDYIKQNNLQDPSDKRR
        SSQKEQPKEKPQKKRQKQGKEEMPKKKRQKQAKEDSDEAAREEKQQKKGKSGFLAPLPLSDALVTFFGTGEDALSRAEVVKRMWDYIKQNNLQDPSDKRR
Subjt:  SSQKEQPKEKPQKKRQKQGKEEMPKKKRQKQAKEDSDEAAREEKQQKKGKSGFLAPLPLSDALVTFFGTGEDALSRAEVVKRMWDYIKQNNLQDPSDKRR

Query:  IICDEKLKELFDVESFHGFTVSKLLAPHFVKTK
        IICDEKLKELFDVESFHGFTVSKLLAPHFVKTK
Subjt:  IICDEKLKELFDVESFHGFTVSKLLAPHFVKTK

A0A6J1EMX5 upstream activation factor subunit UAF30-like2.15e-17580.4Show/hide
Query:  MVSDSELIGRLREFLRNSDLNTTTTTIVRRMLEEEFNVDLLDKKLFIREQVDLFLRTEHEA--------AEEADQEDGDGNLKTEEEDGDSEDGENDDDD
        MVSDSELI RLREFLR+SDLN TTT IVRR LEE F VDL DKK FIREQVDLFL+TEHE          EEADQEDGD NLKTEEEDGDSEDG+NDD D
Subjt:  MVSDSELIGRLREFLRNSDLNTTTTTIVRRMLEEEFNVDLLDKKLFIREQVDLFLRTEHEA--------AEEADQEDGDGNLKTEEEDGDSEDGENDDDD

Query:  DEKGKTSSNKLSKEVKKRGGGFSKLCSLSPQLQEFTGVPEMARTEVVKQLWIHIRENNLQDPSNRRNIICDEPLKALFGVNSINMFQMNKALSKHIWPLE
        DEKGKT SNKL+K  K+ GGGFSKLCSLSPQLQEF GVPEMARTEVVKQLW HIR NNLQDPSNRRNI+CDE LKALF V+SINMFQMNKALSKHIWPLE
Subjt:  DEKGKTSSNKLSKEVKKRGGGFSKLCSLSPQLQEFTGVPEMARTEVVKQLWIHIRENNLQDPSNRRNIICDEPLKALFGVNSINMFQMNKALSKHIWPLE

Query:  SNDVIPAKSSQKE-----------QPKEKPQKKRQKQGKEEMPKKKRQKQAKEDSDEAAREEKQQKKGKSGFLAPLPLSDALVTFFGTGEDALSRAEVVK
        SNDVIPAKSSQKE           QPKEKPQKKRQKQGKEE            DSD++AREEK+QKKGKSGFLAPL LSDALVTF GTGE ALSR++VVK
Subjt:  SNDVIPAKSSQKE-----------QPKEKPQKKRQKQGKEEMPKKKRQKQAKEDSDEAAREEKQQKKGKSGFLAPLPLSDALVTFFGTGEDALSRAEVVK

Query:  RMWDYIKQNNLQDPSDKRRIICDEKLKELFDVESFHGFTVSKLLAPHFVKTK
        RMWDYIKQNNLQDPSDKRR+ICDEKLKELFDVESFHGFTVSKLLA HFVKTK
Subjt:  RMWDYIKQNNLQDPSDKRRIICDEKLKELFDVESFHGFTVSKLLAPHFVKTK

SwissProt top hitse value%identityAlignment
O74503 Upstream activation factor subunit spp273.1e-0626.75Show/hide
Query:  LREFLRNSDLNTTTTTIVRRMLEEEFNVDLLDKKLFIREQVDLFLRTEHEAAEEADQEDGDGNLKTEEEDG------DSEDG--------ENDDDDDEKG
        +++ L   D  T +   VR++LEE   VDL   K   ++   L L+   E A  +++E  +      +  G       +E+G        +  +D +E G
Subjt:  LREFLRNSDLNTTTTTIVRRMLEEEFNVDLLDKKLFIREQVDLFLRTEHEAAEEADQEDGDGNLKTEEEDG------DSEDG--------ENDDDDDEKG

Query:  KTSSNKLSKEVKKRGGGFSKLCSLSPQLQEFTGVPEMARTEVVKQLWIHIRENNLQDPSNRRNIICDEPLKALFGVNSINMFQMNKALSKHIWPLESNDV
        K   N+            +K   LSP+L EF G+ +++R + VK+LW +I+ ++LQDP+++R I+CD+ LK++F V++++MF MNK L+           
Subjt:  KTSSNKLSKEVKKRGGGFSKLCSLSPQLQEFTGVPEMARTEVVKQLWIHIRENNLQDPSNRRNIICDEPLKALFGVNSINMFQMNKALSKHIWPLESNDV

Query:  IPAKSSQKEQPKEKPQKKRQKQGKEEMPKKKRQKQAKEDSDEA
        +  K    + PK +P K  +     ++PK++ ++  +  + E+
Subjt:  IPAKSSQKEQPKEKPQKKRQKQGKEEMPKKKRQKQAKEDSDEA

Q05024 Protein TRI12.0e-1338.02Show/hide
Query:  KGKTSSNKLSKEVKKRGGGFSKLCS-----LSPQLQEFTGVPEMARTEVVKQLWIHIRENNLQDPSNRRNIICDEPLKALFGVNSINMFQMNKALSKHIW
        KGK S +K  ++ KK     S   S     LS  LQ+F G  E+ RT+VVK +W +I+E++LQ+P +RR I+CDE ++ +FG   + MF MNK L+KH++
Subjt:  KGKTSSNKLSKEVKKRGGGFSKLCS-----LSPQLQEFTGVPEMARTEVVKQLWIHIRENNLQDPSNRRNIICDEPLKALFGVNSINMFQMNKALSKHIW

Query:  PLESNDVIPAKSSQKEQPKEK
            ++++  +  QK+ P+++
Subjt:  PLESNDVIPAKSSQKEQPKEK

Q08747 Upstream activation factor subunit UAF301.8e-0930.39Show/hide
Query:  LRNSDLNTTTTTIVRRMLEEEFNVDLLDK----KLFIREQVDLFLRTE--HEAAEEADQEDGDGNLKTEEEDGDSEDGENDDDDDEKGKTSSNKLSKEVK
        L + DL T TT  VR  L+E + +D+  +       IR+ +DL         + E+  +E+    ++  +E   S+    ++ +D + K +  +  K   
Subjt:  LRNSDLNTTTTTIVRRMLEEEFNVDLLDK----KLFIREQVDLFLRTE--HEAAEEADQEDGDGNLKTEEEDGDSEDGENDDDDDEKGKTSSNKLSKEVK

Query:  KRGGGFSKLCSLSPQLQEFTGVPEMARTEVVKQLWIHIRENNLQDPSNRRNIICDEPLKALFGVNSINMFQMNKALSKHIW-PLESNDVIPAKSSQKEQP
         +    ++  +LS  L    G  E+ RTEVV++LW +I+ +NLQ+P+N++ I+CDE L+ + G  S NMF+M+K L+ H+  P + +D  P    Q+ + 
Subjt:  KRGGGFSKLCSLSPQLQEFTGVPEMARTEVVKQLWIHIRENNLQDPSNRRNIICDEPLKALFGVNSINMFQMNKALSKHIW-PLESNDVIPAKSSQKEQP

Query:  KEKP
        KEKP
Subjt:  KEKP

Arabidopsis top hitse value%identityAlignment
AT1G49520.1 SWIB complex BAF60b domain-containing protein1.5e-6948.53Show/hide
Query:  MVSDSELIGRLREFLRNSDLNTTTTTIVRRMLEEEFNVDLLDKKLFIREQVDLFLRTEHEAAEEADQEDGDGNLKTEEEDGDSEDGENDDDDDEKGKTSS
        MVSDS+L+ +LRE LR+SDL TTT   VRR LE  F V+L DKK F+REQ+D FL ++     + +QE+ D N       GD  D E  ++DD+K     
Subjt:  MVSDSELIGRLREFLRNSDLNTTTTTIVRRMLEEEFNVDLLDKKLFIREQVDLFLRTEHEAAEEADQEDGDGNLKTEEEDGDSEDGENDDDDDEKGKTSS

Query:  NKLSKEVKKRGGGFSKLCSLSPQLQEFTGVPEMARTEVVKQLWIHIRENNLQDPSNRRNIICDEPLKALFGVNSINMFQMNKALSKHIWPLESNDVIPAK
         +L  + KKRGGGF+K+C LSPQL++F G  ++ARTEVVK++W +IRE++LQDP+NRRNI+CDE L +LF V +INMFQMNKAL+KHIW L   D    K
Subjt:  NKLSKEVKKRGGGFSKLCSLSPQLQEFTGVPEMARTEVVKQLWIHIRENNLQDPSNRRNIICDEPLKALFGVNSINMFQMNKALSKHIWPLESNDVIPAK

Query:  SSQKEQPKEKPQKKRQKQGKEEMPKKKRQKQAKEDSDEAAR------------EEKQQKKGKSGFLAPLPLSDALVTFFGTGEDALSRAEVVKRMWDYIK
        + ++E   E   ++ +K  K E   +  +++++E+ D + R            EEK +KKG  GF     LS  L  F GT +  L+R EVVK +W YIK
Subjt:  SSQKEQPKEKPQKKRQKQGKEEMPKKKRQKQAKEDSDEAAR------------EEKQQKKGKSGFLAPLPLSDALVTFFGTGEDALSRAEVVKRMWDYIK

Query:  QNNLQDPSDKRRIICDEKLKELFDVESFHGFTVSKLLAPH
        +NNLQDPSDKR IICDE L+ LF VES + F ++K LA H
Subjt:  QNNLQDPSDKRRIICDEKLKELFDVESFHGFTVSKLLAPH

AT2G35605.1 SWIB/MDM2 domain superfamily protein1.3e-1242.45Show/hide
Query:  RQKQAKEDSDEAAREEKQQKKGKSGFLAPLPLSDALVTFFGTGEDALSRAEVVKRMWDYIKQNNLQDPSDKRRIICDEKLKELFDVESFHGF-TVSKLLA
        R   AK  S   A+  +Q     +G L  +P+S  L  F   GE+ +SR   VK++W+YIK NNLQ+P +KR I+CDE+LK +F  +   GF  +SKLL+
Subjt:  RQKQAKEDSDEAAREEKQQKKGKSGFLAPLPLSDALVTFFGTGEDALSRAEVVKRMWDYIKQNNLQDPSDKRRIICDEKLKELFDVESFHGF-TVSKLLA

Query:  PHFVKT
         HF K+
Subjt:  PHFVKT

AT3G03590.1 SWIB/MDM2 domain superfamily protein7.8e-1336.17Show/hide
Query:  SNDVIPAKSSQKEQPKEKPQKKRQKQGKEEMPKKKRQKQAKEDSDEAAREEKQQKKGKSGFLAPLPLSDALVTFFGTGEDALSRAEVVKRMWDYIKQNNL
        ++ ++ A S++K   K K + K + + K + P KK  +                    +G     P+S  L  F GTGE   SR + +K +W YIK ++L
Subjt:  SNDVIPAKSSQKEQPKEKPQKKRQKQGKEEMPKKKRQKQAKEDSDEAAREEKQQKKGKSGFLAPLPLSDALVTFFGTGEDALSRAEVVKRMWDYIKQNNL

Query:  QDPSDKRRIICDEKLKELFDVESFHGF-TVSKLLAPHFVKT
        Q+P+DKR I CDE LK +F+ +   GF  +SKLL+PHFVKT
Subjt:  QDPSDKRRIICDEKLKELFDVESFHGF-TVSKLLAPHFVKT

AT3G19080.1 SWIB complex BAF60b domain-containing protein1.4e-6538.51Show/hide
Query:  MVSDSELIGRLREFLRNSDLNTTTTTIVRRMLEEEFNVDLLDKKLFIREQVDLFLRT--------------EHEAAEEADQE---------DGDGNLKTE
        MVSD +L+ RLRE L +SDLNT T   VRR LE +F VDL DKK +IR+Q+D FL +              E+  A+E   E         DGDG+   E
Subjt:  MVSDSELIGRLREFLRNSDLNTTTTTIVRRMLEEEFNVDLLDKKLFIREQVDLFLRT--------------EHEAAEEADQE---------DGDGNLKTE

Query:  EE----------------------------------------------------------------------------------------------DGDS
        E+                                                                                              DG +
Subjt:  EE----------------------------------------------------------------------------------------------DGDS

Query:  EDGENDDDD------DEKGKTS---------------------------SNKLSKEVKKRGGGFSKLCSLSPQLQEFTGVPEMARTEVVKQLWIHIRENN
         D + +D+D      D+KG+ S                           +  + K  +K GGGF+K+CSLSP+LQ FTGV E+ARTEVVK LW +I+ENN
Subjt:  EDGENDDDD------DEKGKTS---------------------------SNKLSKEVKKRGGGFSKLCSLSPQLQEFTGVPEMARTEVVKQLWIHIRENN

Query:  LQDPSNRRNIICDEPLKALFGVNSINMFQMNKALSKHIWPLESNDVIPAKSSQKEQPKEKPQKKRQKQGKEEMPKKKRQKQAKEDSDEAAREEKQQKKGK
        LQDP+++R+IICDE  ++LF V SINMFQMNK L+KHIWPLE N              E    K  K GK++M       ++  DS+E   ++K+QKK  
Subjt:  LQDPSNRRNIICDEPLKALFGVNSINMFQMNKALSKHIWPLESNDVIPAKSSQKEQPKEKPQKKRQKQGKEEMPKKKRQKQAKEDSDEAAREEKQQKKGK

Query:  SGFLAPLPLSDALVTFFGTGEDALSRAEVVKRMWDYIKQNNLQDPSDKRRIICDEKLKELFDVESFHGFTVSKLLAPHFVKTK
           LAPLPLSDALV F G GE++LSRA+VVKR+W+YI  N+LQDPSDKRR+ICDEKLKELF+V+SF   +VSKLL  HF+K +
Subjt:  SGFLAPLPLSDALVTFFGTGEDALSRAEVVKRMWDYIKQNNLQDPSDKRRIICDEKLKELFDVESFHGFTVSKLLAPHFVKTK

AT4G22360.1 SWIB complex BAF60b domain-containing protein1.3e-3637.08Show/hide
Query:  SSNKLSKE-----VKKRG--GGFSKLCSLSPQLQEFTGVPEMARTEVVKQLWIHIRENNLQDPSNRRNIICDEPLKALFGVNSINMFQMNKALSKHIWPL
        S N+  KE      K++G  GG +K+C +SP+L+   G P + RTE+V+QLW +IR+NNLQDPSN+R IICD+ L+ +F  +  +MF+MNK L+KHI PL
Subjt:  SSNKLSKE-----VKKRG--GGFSKLCSLSPQLQEFTGVPEMARTEVVKQLWIHIRENNLQDPSNRRNIICDEPLKALFGVNSINMFQMNKALSKHIWPL

Query:  ESNDVIPAKSSQKEQPKEKPQKKRQKQGKEEMPKKKRQKQAKEDSDEAAREEKQQKKGKSGFLAPLPLSDALVTFFGTGEDALSRAEVVKRMWDYIKQNN
        +     P+K S + +                  K K + + K ++ E            +   + + LS+ L  FFGTGE  ++  E+++R+W+YIK NN
Subjt:  ESNDVIPAKSSQKEQPKEKPQKKRQKQGKEEMPKKKRQKQAKEDSDEAAREEKQQKKGKSGFLAPLPLSDALVTFFGTGEDALSRAEVVKRMWDYIKQNN

Query:  LQDPSDKRRIICDEKLKELFDVESFHGFTVSKLLAPHFVK
        L+DP +   I CDEKL++L   ES     ++++L  H  K
Subjt:  LQDPSDKRRIICDEKLKELFDVESFHGFTVSKLLAPHFVK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTCAGACTCGGAGCTCATCGGTCGGCTCCGGGAGTTTCTTAGGAATTCCGACCTCAATACCACCACCACTACCATCGTCCGCCGAATGCTCGAGGAGGAATTCAA
CGTTGATTTGCTCGATAAGAAGCTGTTTATTAGGGAACAGGTGGACTTGTTCCTCCGGACTGAGCACGAGGCGGCCGAGGAAGCTGACCAGGAGGATGGAGACGGAAATT
TGAAGACGGAAGAAGAGGATGGAGATAGTGAAGACGGAGAAAACGACGACGACGATGATGAAAAGGGTAAAACCAGTTCTAACAAGCTTAGTAAAGAGGTGAAGAAACGA
GGTGGTGGTTTTAGCAAGCTGTGTAGCCTTTCCCCACAACTGCAGGAATTTACAGGAGTTCCTGAAATGGCAAGGACTGAGGTTGTGAAGCAACTATGGATCCACATTAG
AGAGAATAATTTGCAAGACCCCAGTAATAGGAGAAATATTATCTGTGATGAACCATTGAAAGCACTCTTTGGTGTTAATTCCATCAACATGTTTCAAATGAATAAAGCTC
TATCAAAGCATATTTGGCCTTTGGAATCAAATGACGTTATTCCAGCCAAATCAAGTCAGAAGGAGCAGCCAAAGGAGAAGCCCCAGAAGAAGCGGCAAAAGCAAGGAAAG
GAAGAGATGCCAAAGAAGAAGCGGCAAAAGCAAGCGAAGGAAGACTCAGATGAGGCTGCAAGAGAGGAAAAGCAGCAAAAGAAAGGGAAATCAGGTTTTCTTGCTCCGCT
TCCACTTTCGGATGCTCTGGTGACCTTTTTTGGTACAGGAGAAGATGCGTTATCTCGCGCTGAAGTTGTGAAAAGAATGTGGGATTACATAAAGCAAAACAACCTTCAGG
ACCCTTCTGACAAAAGGAGAATAATCTGTGATGAGAAGCTAAAGGAACTCTTTGATGTCGAGTCATTCCATGGCTTCACTGTTTCGAAACTCCTGGCCCCTCATTTTGTA
AAGACAAAATACAAAAGAATTTAG
mRNA sequenceShow/hide mRNA sequence
GGCCAATTGGCTGATGTGTCAATACTCTAGTGGTCATCTTACCTTCAGCTCAACGAGAAAGAGAAACAAAAAACGGGCAACAATAGAGAATTTTAATCTATTTTTTCTAT
TATTTTCTTTAAAATAAAAATAATTAAATAAAAACAAATAATTAATTAATTTCCATATTTGTTCCTTCTTCTTCTTCTTCTTCTTCCCCAAATTTCCAATCTGTTTCTTC
ATCCCAAGTCTTTCCTCTTCCTTTCCTCTTCGACGGAGACTGCCGCTCAACTCCAAAACCTACCCACCCACCGCCGCCGCCGTCGCCGTTGCCGTTGCCCGATTCTTCTC
CCAATCGCCCGTGTTACTACTCTGCTTCCGACATTATTTTGGATTACAGCAATGGTTTCAGACTCGGAGCTCATCGGTCGGCTCCGGGAGTTTCTTAGGAATTCCGACCT
CAATACCACCACCACTACCATCGTCCGCCGAATGCTCGAGGAGGAATTCAACGTTGATTTGCTCGATAAGAAGCTGTTTATTAGGGAACAGGTGGACTTGTTCCTCCGGA
CTGAGCACGAGGCGGCCGAGGAAGCTGACCAGGAGGATGGAGACGGAAATTTGAAGACGGAAGAAGAGGATGGAGATAGTGAAGACGGAGAAAACGACGACGACGATGAT
GAAAAGGGTAAAACCAGTTCTAACAAGCTTAGTAAAGAGGTGAAGAAACGAGGTGGTGGTTTTAGCAAGCTGTGTAGCCTTTCCCCACAACTGCAGGAATTTACAGGAGT
TCCTGAAATGGCAAGGACTGAGGTTGTGAAGCAACTATGGATCCACATTAGAGAGAATAATTTGCAAGACCCCAGTAATAGGAGAAATATTATCTGTGATGAACCATTGA
AAGCACTCTTTGGTGTTAATTCCATCAACATGTTTCAAATGAATAAAGCTCTATCAAAGCATATTTGGCCTTTGGAATCAAATGACGTTATTCCAGCCAAATCAAGTCAG
AAGGAGCAGCCAAAGGAGAAGCCCCAGAAGAAGCGGCAAAAGCAAGGAAAGGAAGAGATGCCAAAGAAGAAGCGGCAAAAGCAAGCGAAGGAAGACTCAGATGAGGCTGC
AAGAGAGGAAAAGCAGCAAAAGAAAGGGAAATCAGGTTTTCTTGCTCCGCTTCCACTTTCGGATGCTCTGGTGACCTTTTTTGGTACAGGAGAAGATGCGTTATCTCGCG
CTGAAGTTGTGAAAAGAATGTGGGATTACATAAAGCAAAACAACCTTCAGGACCCTTCTGACAAAAGGAGAATAATCTGTGATGAGAAGCTAAAGGAACTCTTTGATGTC
GAGTCATTCCATGGCTTCACTGTTTCGAAACTCCTGGCCCCTCATTTTGTAAAGACAAAATACAAAAGAATTTAGTTGATTATCAAAATTGTCTCTAGTAGCACAGCTTC
AGCAAATCTTTAGCCAATTCTTGGTATGCATTCTGGTTTCTGTCCTTTCATCTTGCAACGTGGCCGTACGCTCTATAGGATTTTCCTTTCTTGTCTTTTTTCGTTGAACA
AGGGAGTTCGACCGTTAGAGAAGCAAGTAATATATTGACCAATTGGGTTATGTTCATGTTTGTCGAATTCTCTCTTAATTGAATGTGAGAATTATAGAGGTTATTTTGGT
TCGTTCTACATGCACTTTTCAGGGTTGTTTAGTATTTGCAAAGGGGTCCTCCCTCACAAAGATGATCTGTTTTTGGGATTTTTTTACCCTAAGGTTACTGATTTTTTTTC
GTTTTTGATAGAGCGAAGTCGTTATATTGATGGGGCATAACTATTGATTTTTTATTTCAGAAAGGGTTGTCAATGATGCATCAACAGTGAAAATTTACGTATTTGTTGCA
AATTTTGTTAAATTACAAGTC
Protein sequenceShow/hide protein sequence
MVSDSELIGRLREFLRNSDLNTTTTTIVRRMLEEEFNVDLLDKKLFIREQVDLFLRTEHEAAEEADQEDGDGNLKTEEEDGDSEDGENDDDDDEKGKTSSNKLSKEVKKR
GGGFSKLCSLSPQLQEFTGVPEMARTEVVKQLWIHIRENNLQDPSNRRNIICDEPLKALFGVNSINMFQMNKALSKHIWPLESNDVIPAKSSQKEQPKEKPQKKRQKQGK
EEMPKKKRQKQAKEDSDEAAREEKQQKKGKSGFLAPLPLSDALVTFFGTGEDALSRAEVVKRMWDYIKQNNLQDPSDKRRIICDEKLKELFDVESFHGFTVSKLLAPHFV
KTKYKRI