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MC02g1216 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC02g1216
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionPhotosystem II CP43 reaction center protein
Genome locationMC02:10996591..10996695
RNA-Seq ExpressionMC02g1216
SyntenyMC02g1216
Gene Ontology termsGO:0009767 - photosynthetic electron transport chain (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0009521 - photosystem (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0016168 - chlorophyll binding (molecular function)
InterPro domainsIPR000932 - Photosystem antenna protein-like
IPR036001 - Photosystem antenna protein-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AET02870.1 photosystem II CP43 chlorophyll apoprotein [Medicago truncatula]2.02e-1388.57Show/hide
Query:  LGSLNSVDGIATEINAINYVSSRSWLATSHFVLGF
        LGSLNSV G+ATEINA+NYVS RSWLATSHFVLGF
Subjt:  LGSLNSVDGIATEINAINYVSSRSWLATSHFVLGF
KAG0540647.1 hypothetical protein BDA96_03G426800 [Sorghum bicolor]2.02e-1388.57Show/hide
Query:  LGSLNSVDGIATEINAINYVSSRSWLATSHFVLGF
        LGSL SVDG+ATEINA+NYVS RSWLATSHFVLGF
Subjt:  LGSLNSVDGIATEINAINYVSSRSWLATSHFVLGF
MBA0753695.1 hypothetical protein [Gossypium gossypioides]7.58e-1491.43Show/hide
Query:  LGSLNSVDGIATEINAINYVSSRSWLATSHFVLGF
        LGSLNSV GIATEINA+NYVS+RSWLATSHFVLGF
Subjt:  LGSLNSVDGIATEINAINYVSSRSWLATSHFVLGF
RZC90399.1 hypothetical protein C5167_041351 [Papaver somniferum]2.02e-1388.57Show/hide
Query:  LGSLNSVDGIATEINAINYVSSRSWLATSHFVLGF
        L SLNSVDG+ATEINA+NYVS RSWLATSHFVLGF
Subjt:  LGSLNSVDGIATEINAINYVSSRSWLATSHFVLGF
TYJ27193.1 hypothetical protein E1A91_A07G169800v1 [Gossypium mustelinum]2.46e-1488.57Show/hide
Query:  LGSLNSVDGIATEINAINYVSSRSWLATSHFVLGF
        LGSLNS+DG+ATEIN +NYVSSRSWLATSHFVLGF
Subjt:  LGSLNSVDGIATEINAINYVSSRSWLATSHFVLGF
TrEMBL top hitse value%identityAlignment
A0A1B6Q7R5 Uncharacterized protein9.77e-1488.57Show/hide
Query:  LGSLNSVDGIATEINAINYVSSRSWLATSHFVLGF
        LGSL SVDG+ATEINA+NYVS RSWLATSHFVLGF
Subjt:  LGSLNSVDGIATEINAINYVSSRSWLATSHFVLGF
A0A444ZGJ8 Uncharacterized protein1.25e-1388.57Show/hide
Query:  LGSLNSVDGIATEINAINYVSSRSWLATSHFVLGF
        LGSLNSV G+ATEINA+NYVS RSWLATSHFVLGF
Subjt:  LGSLNSVDGIATEINAINYVSSRSWLATSHFVLGF
A0A5D2YM11 Uncharacterized protein1.19e-1488.57Show/hide
Query:  LGSLNSVDGIATEINAINYVSSRSWLATSHFVLGF
        LGSLNS+DG+ATEIN +NYVSSRSWLATSHFVLGF
Subjt:  LGSLNSVDGIATEINAINYVSSRSWLATSHFVLGF
A0A7J9CZI3 Uncharacterized protein3.67e-1491.43Show/hide
Query:  LGSLNSVDGIATEINAINYVSSRSWLATSHFVLGF
        LGSLNSV GIATEINA+NYVS+RSWLATSHFVLGF
Subjt:  LGSLNSVDGIATEINAINYVSSRSWLATSHFVLGF
G7LB05 Photosystem II CP43 chlorophyll apoprotein9.77e-1488.57Show/hide
Query:  LGSLNSVDGIATEINAINYVSSRSWLATSHFVLGF
        LGSLNSV G+ATEINA+NYVS RSWLATSHFVLGF
Subjt:  LGSLNSVDGIATEINAINYVSSRSWLATSHFVLGF
SwissProt top hitse value%identityAlignment
A9LYI1 Photosystem II CP43 reaction center protein6.3e-1188.57Show/hide
Query:  LGSLNSVDGIATEINAINYVSSRSWLATSHFVLGF
        LGSLNSV G+ATEINA+NYVS RSWLATSHFVLGF
Subjt:  LGSLNSVDGIATEINAINYVSSRSWLATSHFVLGF
Q3V538 Photosystem II CP43 reaction center protein6.3e-1188.57Show/hide
Query:  LGSLNSVDGIATEINAINYVSSRSWLATSHFVLGF
        LGSLNSV G+ATEINA+NYVS RSWLATSHFVLGF
Subjt:  LGSLNSVDGIATEINAINYVSSRSWLATSHFVLGF
Q70Y07 Photosystem II CP43 reaction center protein6.3e-1188.57Show/hide
Query:  LGSLNSVDGIATEINAINYVSSRSWLATSHFVLGF
        LGSLNSV G+ATEINA+NYVS RSWLATSHFVLGF
Subjt:  LGSLNSVDGIATEINAINYVSSRSWLATSHFVLGF
Q85AU0 Photosystem II CP43 reaction center protein6.3e-1188.57Show/hide
Query:  LGSLNSVDGIATEINAINYVSSRSWLATSHFVLGF
        LGSLNSV G+ATEINA+NYVS RSWLATSHFVLGF
Subjt:  LGSLNSVDGIATEINAINYVSSRSWLATSHFVLGF
Q85FM3 Photosystem II CP43 reaction center protein6.3e-1188.57Show/hide
Query:  LGSLNSVDGIATEINAINYVSSRSWLATSHFVLGF
        LGSLNSV G+ATEINA+NYVS RSWLATSHFVLGF
Subjt:  LGSLNSVDGIATEINAINYVSSRSWLATSHFVLGF
Arabidopsis top hitse value%identityAlignment
ATCG00280.1 photosystem II reaction center protein C9.9e-1285.71Show/hide
Query:  LGSLNSVDGIATEINAINYVSSRSWLATSHFVLGF
        LGSLNSV G+ATEINA+NYVS RSWL+TSHFVLGF
Subjt:  LGSLNSVDGIATEINAINYVSSRSWLATSHFVLGF

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTAGGTTCTTTAAATTCCGTGGATGGCATAGCTACTGAAATTAATGCAATCAATTATGTCTCTTCTAGAAGTTGGTTAGCTACCTCTCATTTTGTTCTAGGATTC
mRNA sequenceShow/hide mRNA sequence
TTAGGTTCTTTAAATTCCGTGGATGGCATAGCTACTGAAATTAATGCAATCAATTATGTCTCTTCTAGAAGTTGGTTAGCTACCTCTCATTTTGTTCTAGGATTC
Protein sequenceShow/hide protein sequence
LGSLNSVDGIATEINAINYVSSRSWLATSHFVLGF