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MC02g1259 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC02g1259
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionTHO complex subunit 1
Genome locationMC02:11653314..11653643
RNA-Seq ExpressionMC02g1259
SyntenyMC02g1259
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059476.1 Transposon TX1 uncharacterized [Cucumis melo var. makuwa]2.04e-1642.45Show/hide
Query:  ATSFPDTYSISFKKGAVIATCYNANASNHSWDLGLRKGIFAREFGNWVALTQRLEGCKVGVGQDSLKWAIDSSGSFSYRSYFLKFFPSARGLQVPLIKAI
        A+ + D Y IS KK A++A  +    SN +WDLGLR+ +F RE GN++AL Q L G  V   +DSL+  +++SG FS +S FLK    A  + +P++  I
Subjt:  ATSFPDTYSISFKKGAVIATCYNANASNHSWDLGLRKGIFAREFGNWVALTQRLEGCKVGVGQDSLKWAIDSSGSFSYRSYFLKFFPSARGLQVPLIKAI

Query:  LRFKIP
         + KIP
Subjt:  LRFKIP

KAA0062399.1 THO complex subunit 1 [Cucumis melo var. makuwa]7.46e-1135.45Show/hide
Query:  DSFATSFPDTYSISFKKGAVIATCYNANASNHSWDLGLRKGIFAREFGNWVALTQRLEGCKVGVGQDSLKWAIDSSGSFSYRSYFLKFFPSARGLQVPLI
        +  A  FP+ +S+S  K A +A C+   A  H W+LGLR+ +   +  N  A+ + L       G DSLKW  + +GSF  +S FL     +  + VPLI
Subjt:  DSFATSFPDTYSISFKKGAVIATCYNANASNHSWDLGLRKGIFAREFGNWVALTQRLEGCKVGVGQDSLKWAIDSSGSFSYRSYFLKFFPSARGLQVPLI

Query:  KAILRFKIPK
        + I + KI K
Subjt:  KAILRFKIPK

TYK01352.1 hypothetical protein E5676_scaffold29G00370 [Cucumis melo var. makuwa]8.12e-1038.75Show/hide
Query:  FPDTYSISFKKGAVIATCYNANASNHSWDLGLRKGIFAREFGNWVALTQRLEGCKVGVGQDSLKWAIDSSGSFSYRSYFL
        FPD + +S  K A +A C+     +HSW+LGLR+ +   EFGN   + + L         DSLKW +++SG+F+ +S FL
Subjt:  FPDTYSISFKKGAVIATCYNANASNHSWDLGLRKGIFAREFGNWVALTQRLEGCKVGVGQDSLKWAIDSSGSFSYRSYFL

TYK10100.1 protein PIR [Cucumis melo var. makuwa]1.74e-0935.58Show/hide
Query:  FPDTYSISFKKGAVIATCYNANASNHSWDLGLRKGIFAREFGNWVALTQRLEGCKVGVGQDSLKWAIDSSGSFSYRSYFLKFFPSARGLQVPLIKAILRF
        F + +S++  K A +A C+  N + H W+LGLR+ +   E  N  ++ + L       G DSLKW    +GSF+ +S FL     +  + VPLI+ I + 
Subjt:  FPDTYSISFKKGAVIATCYNANASNHSWDLGLRKGIFAREFGNWVALTQRLEGCKVGVGQDSLKWAIDSSGSFSYRSYFLKFFPSARGLQVPLIKAILRF

Query:  KIPK
        KIPK
Subjt:  KIPK

XP_022151325.1 uncharacterized protein LOC111019288 [Momordica charantia]1.20e-0942.86Show/hide
Query:  YSISFKKGAVIATCYNANASNHSWDLGLRKGIFAREFGNWVALTQRLEGCKVGVGQDSLKWAIDSSGSFSYRSYFLK
        ++IS K  AVIA C+  N    +WDLG R+G+F RE  NW+ + QRLE  ++G   D   W  D +G F+ +S +LK
Subjt:  YSISFKKGAVIATCYNANASNHSWDLGLRKGIFAREFGNWVALTQRLEGCKVGVGQDSLKWAIDSSGSFSYRSYFLK

TrEMBL top hitse value%identityAlignment
A0A5A7V9M3 THO complex subunit 13.61e-1135.45Show/hide
Query:  DSFATSFPDTYSISFKKGAVIATCYNANASNHSWDLGLRKGIFAREFGNWVALTQRLEGCKVGVGQDSLKWAIDSSGSFSYRSYFLKFFPSARGLQVPLI
        +  A  FP+ +S+S  K A +A C+   A  H W+LGLR+ +   +  N  A+ + L       G DSLKW  + +GSF  +S FL     +  + VPLI
Subjt:  DSFATSFPDTYSISFKKGAVIATCYNANASNHSWDLGLRKGIFAREFGNWVALTQRLEGCKVGVGQDSLKWAIDSSGSFSYRSYFLKFFPSARGLQVPLI

Query:  KAILRFKIPK
        + I + KI K
Subjt:  KAILRFKIPK

A0A5D3BRF1 Uncharacterized protein3.93e-1038.75Show/hide
Query:  FPDTYSISFKKGAVIATCYNANASNHSWDLGLRKGIFAREFGNWVALTQRLEGCKVGVGQDSLKWAIDSSGSFSYRSYFL
        FPD + +S  K A +A C+     +HSW+LGLR+ +   EFGN   + + L         DSLKW +++SG+F+ +S FL
Subjt:  FPDTYSISFKKGAVIATCYNANASNHSWDLGLRKGIFAREFGNWVALTQRLEGCKVGVGQDSLKWAIDSSGSFSYRSYFL

A0A5D3BWG7 Transposon TX1 uncharacterized9.88e-1742.45Show/hide
Query:  ATSFPDTYSISFKKGAVIATCYNANASNHSWDLGLRKGIFAREFGNWVALTQRLEGCKVGVGQDSLKWAIDSSGSFSYRSYFLKFFPSARGLQVPLIKAI
        A+ + D Y IS KK A++A  +    SN +WDLGLR+ +F RE GN++AL Q L G  V   +DSL+  +++SG FS +S FLK    A  + +P++  I
Subjt:  ATSFPDTYSISFKKGAVIATCYNANASNHSWDLGLRKGIFAREFGNWVALTQRLEGCKVGVGQDSLKWAIDSSGSFSYRSYFLKFFPSARGLQVPLIKAI

Query:  LRFKIP
         + KIP
Subjt:  LRFKIP

A0A5D3CFH0 Protein PIR8.42e-1035.58Show/hide
Query:  FPDTYSISFKKGAVIATCYNANASNHSWDLGLRKGIFAREFGNWVALTQRLEGCKVGVGQDSLKWAIDSSGSFSYRSYFLKFFPSARGLQVPLIKAILRF
        F + +S++  K A +A C+  N + H W+LGLR+ +   E  N  ++ + L       G DSLKW    +GSF+ +S FL     +  + VPLI+ I + 
Subjt:  FPDTYSISFKKGAVIATCYNANASNHSWDLGLRKGIFAREFGNWVALTQRLEGCKVGVGQDSLKWAIDSSGSFSYRSYFLKFFPSARGLQVPLIKAILRF

Query:  KIPK
        KIPK
Subjt:  KIPK

A0A6J1DAV1 uncharacterized protein LOC1110192885.83e-1042.86Show/hide
Query:  YSISFKKGAVIATCYNANASNHSWDLGLRKGIFAREFGNWVALTQRLEGCKVGVGQDSLKWAIDSSGSFSYRSYFLK
        ++IS K  AVIA C+  N    +WDLG R+G+F RE  NW+ + QRLE  ++G   D   W  D +G F+ +S +LK
Subjt:  YSISFKKGAVIATCYNANASNHSWDLGLRKGIFAREFGNWVALTQRLEGCKVGVGQDSLKWAIDSSGSFSYRSYFLK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GATTCTTTTGCAACCTCCTTTCCTGATACTTATTCGATTTCTTTTAAGAAAGGAGCAGTTATTGCCACGTGTTATAATGCAAATGCTTCTAATCATTCTTGGGACTTAGG
CCTCCGTAAAGGCATTTTTGCTAGAGAGTTTGGCAATTGGGTGGCCCTCACGCAAAGATTGGAAGGCTGTAAAGTTGGGGTGGGTCAAGACAGTTTGAAATGGGCTATAG
ATTCCAGTGGTTCTTTCTCTTATAGGTCTTATTTCCTAAAGTTTTTCCCCTCAGCAAGGGGATTACAAGTTCCCCTAATTAAAGCCATTTTGAGGTTTAAGATTCCCAAA
mRNA sequenceShow/hide mRNA sequence
GATTCTTTTGCAACCTCCTTTCCTGATACTTATTCGATTTCTTTTAAGAAAGGAGCAGTTATTGCCACGTGTTATAATGCAAATGCTTCTAATCATTCTTGGGACTTAGG
CCTCCGTAAAGGCATTTTTGCTAGAGAGTTTGGCAATTGGGTGGCCCTCACGCAAAGATTGGAAGGCTGTAAAGTTGGGGTGGGTCAAGACAGTTTGAAATGGGCTATAG
ATTCCAGTGGTTCTTTCTCTTATAGGTCTTATTTCCTAAAGTTTTTCCCCTCAGCAAGGGGATTACAAGTTCCCCTAATTAAAGCCATTTTGAGGTTTAAGATTCCCAAA
Protein sequenceShow/hide protein sequence
DSFATSFPDTYSISFKKGAVIATCYNANASNHSWDLGLRKGIFAREFGNWVALTQRLEGCKVGVGQDSLKWAIDSSGSFSYRSYFLKFFPSARGLQVPLIKAILRFKIPK