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MC02g1300 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC02g1300
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationMC02:13229062..13229498
RNA-Seq ExpressionMC02g1300
SyntenyMC02g1300
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON64464.1 hypothetical protein TorRG33x02_273130 [Trema orientale]8.35e-2240.97Show/hide
Query:  KKIKVLLVRQKMMKALDDSSKFPETVTERKKQKINEFACSTLIVHLSDNVLRRVSDIETVAKLLEKHENFYTSKFAHQELTYSSCRPLEYLTNEIXLKER
        KK+K +LV+QK  K L D+S  PET+   +K+++ E A S LI++L+DNVLR+V + +T AK+  K ++ Y +K                L+N+I LKE+
Subjt:  KKIKVLLVRQKMMKALDDSSKFPETVTERKKQKINEFACSTLIVHLSDNVLRRVSDIETVAKLLEKHENFYTSKFAHQELTYSSCRPLEYLTNEIXLKER

Query:  MFSYRMDPSKLLEDNIDNGFNGICWNVANLGKEKLVENQAIIPL
        +F ++MD +K LEDN+D+ F  I  ++AN+ ++   ENQAII L
Subjt:  MFSYRMDPSKLLEDNIDNGFNGICWNVANLGKEKLVENQAIIPL

PON96088.1 hypothetical protein TorRG33x02_080180, partial [Trema orientale]1.35e-2241.67Show/hide
Query:  KKIKVLLVRQKMMKALDDSSKFPETVTERKKQKINEFACSTLIVHLSDNVLRRVSDIETVAKLLEKHENFYTSKFAHQELTYSSCRPLEYLTNEIXLKER
        KK+K +LV+QK  KAL D S  PET+   +K+++ E A S LI++L+DNVLR+V + +T AK+  K ++ Y +K                L+N+I LKE+
Subjt:  KKIKVLLVRQKMMKALDDSSKFPETVTERKKQKINEFACSTLIVHLSDNVLRRVSDIETVAKLLEKHENFYTSKFAHQELTYSSCRPLEYLTNEIXLKER

Query:  MFSYRMDPSKLLEDNIDNGFNGICWNVANLGKEKLVENQAIIPL
        +F ++MD +K LEDN+D+ F  I  ++AN+ ++   ENQAII L
Subjt:  MFSYRMDPSKLLEDNIDNGFNGICWNVANLGKEKLVENQAIIPL

TXG58315.1 hypothetical protein EZV62_016144 [Acer yangbiense]3.69e-2039.73Show/hide
Query:  KKIKVLLVRQKMMKALDDSSKFPETVTERKKQKINEFACSTLIVHLSDNVLRRVSDIETVAKLLEKHENFYTSKFAHQELTYSSCRPLEYLTNEIXLKER
        K +K +LV+QK +K L+     P T++  +KQ + E A ST++++L+DNVLR+V+D +T AK+  K E+ Y +K               YL+ +I LKE+
Subjt:  KKIKVLLVRQKMMKALDDSSKFPETVTERKKQKINEFACSTLIVHLSDNVLRRVSDIETVAKLLEKHENFYTSKFAHQELTYSSCRPLEYLTNEIXLKER

Query:  MFSYRMDPSKLLEDNIDNGFNGICWNVANLGKEKLV--ENQAIIPL
        +F ++MD SKLLEDN+D+ F  +   +AN   ++ +  ENQAII L
Subjt:  MFSYRMDPSKLLEDNIDNGFNGICWNVANLGKEKLV--ENQAIIPL

TYK05711.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]5.59e-2138.19Show/hide
Query:  KKIKVLLVRQKMMKALDDSSKFPETVTERKKQKINEFACSTLIVHLSDNVLRRVSDIETVAKLLEKHENFYTSKFAHQELTYSSCRPLEYLTNEIXLKER
        KKI+V+LV+ K++K  D+ S  PE +TE +K+ ++E A ST++++LSD VLR V +  T+ +L +K E+ Y +KF               L N++ LK++
Subjt:  KKIKVLLVRQKMMKALDDSSKFPETVTERKKQKINEFACSTLIVHLSDNVLRRVSDIETVAKLLEKHENFYTSKFAHQELTYSSCRPLEYLTNEIXLKER

Query:  MFSYRMDPSKLLEDNIDNGFNGICWNVANLGKEKLVENQAIIPL
         F Y+M+ SK LE+N+D  F  I   + N+G++   ENQ +I L
Subjt:  MFSYRMDPSKLLEDNIDNGFNGICWNVANLGKEKLVENQAIIPL

TYK11792.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]1.97e-2038.19Show/hide
Query:  KKIKVLLVRQKMMKALDDSSKFPETVTERKKQKINEFACSTLIVHLSDNVLRRVSDIETVAKLLEKHENFYTSKFAHQELTYSSCRPLEYLTNEIXLKER
        KKI+ +LV+ K+ K LD+  + P+ +TE +K+ ++E A ST++++LSD VLR V +  T  +L +K E+ Y +K                L N+I +KE+
Subjt:  KKIKVLLVRQKMMKALDDSSKFPETVTERKKQKINEFACSTLIVHLSDNVLRRVSDIETVAKLLEKHENFYTSKFAHQELTYSSCRPLEYLTNEIXLKER

Query:  MFSYRMDPSKLLEDNIDNGFNGICWNVANLGKEKLVENQAIIPL
         F Y+MD SK LE+N+D  F  I  ++ N+G++   ENQA I L
Subjt:  MFSYRMDPSKLLEDNIDNGFNGICWNVANLGKEKLVENQAIIPL

TrEMBL top hitse value%identityAlignment
A0A2P5CTT8 Uncharacterized protein4.04e-2240.97Show/hide
Query:  KKIKVLLVRQKMMKALDDSSKFPETVTERKKQKINEFACSTLIVHLSDNVLRRVSDIETVAKLLEKHENFYTSKFAHQELTYSSCRPLEYLTNEIXLKER
        KK+K +LV+QK  K L D+S  PET+   +K+++ E A S LI++L+DNVLR+V + +T AK+  K ++ Y +K                L+N+I LKE+
Subjt:  KKIKVLLVRQKMMKALDDSSKFPETVTERKKQKINEFACSTLIVHLSDNVLRRVSDIETVAKLLEKHENFYTSKFAHQELTYSSCRPLEYLTNEIXLKER

Query:  MFSYRMDPSKLLEDNIDNGFNGICWNVANLGKEKLVENQAIIPL
        +F ++MD +K LEDN+D+ F  I  ++AN+ ++   ENQAII L
Subjt:  MFSYRMDPSKLLEDNIDNGFNGICWNVANLGKEKLVENQAIIPL

A0A2P5FE65 Uncharacterized protein (Fragment)6.55e-2341.67Show/hide
Query:  KKIKVLLVRQKMMKALDDSSKFPETVTERKKQKINEFACSTLIVHLSDNVLRRVSDIETVAKLLEKHENFYTSKFAHQELTYSSCRPLEYLTNEIXLKER
        KK+K +LV+QK  KAL D S  PET+   +K+++ E A S LI++L+DNVLR+V + +T AK+  K ++ Y +K                L+N+I LKE+
Subjt:  KKIKVLLVRQKMMKALDDSSKFPETVTERKKQKINEFACSTLIVHLSDNVLRRVSDIETVAKLLEKHENFYTSKFAHQELTYSSCRPLEYLTNEIXLKER

Query:  MFSYRMDPSKLLEDNIDNGFNGICWNVANLGKEKLVENQAIIPL
        +F ++MD +K LEDN+D+ F  I  ++AN+ ++   ENQAII L
Subjt:  MFSYRMDPSKLLEDNIDNGFNGICWNVANLGKEKLVENQAIIPL

A0A5C7HNJ4 Uncharacterized protein1.79e-2039.73Show/hide
Query:  KKIKVLLVRQKMMKALDDSSKFPETVTERKKQKINEFACSTLIVHLSDNVLRRVSDIETVAKLLEKHENFYTSKFAHQELTYSSCRPLEYLTNEIXLKER
        K +K +LV+QK +K L+     P T++  +KQ + E A ST++++L+DNVLR+V+D +T AK+  K E+ Y +K               YL+ +I LKE+
Subjt:  KKIKVLLVRQKMMKALDDSSKFPETVTERKKQKINEFACSTLIVHLSDNVLRRVSDIETVAKLLEKHENFYTSKFAHQELTYSSCRPLEYLTNEIXLKER

Query:  MFSYRMDPSKLLEDNIDNGFNGICWNVANLGKEKLV--ENQAIIPL
        +F ++MD SKLLEDN+D+ F  +   +AN   ++ +  ENQAII L
Subjt:  MFSYRMDPSKLLEDNIDNGFNGICWNVANLGKEKLV--ENQAIIPL

A0A5D3C1A2 Retrovirus-related Pol polyprotein from transposon TNT 1-942.70e-2138.19Show/hide
Query:  KKIKVLLVRQKMMKALDDSSKFPETVTERKKQKINEFACSTLIVHLSDNVLRRVSDIETVAKLLEKHENFYTSKFAHQELTYSSCRPLEYLTNEIXLKER
        KKI+V+LV+ K++K  D+ S  PE +TE +K+ ++E A ST++++LSD VLR V +  T+ +L +K E+ Y +KF               L N++ LK++
Subjt:  KKIKVLLVRQKMMKALDDSSKFPETVTERKKQKINEFACSTLIVHLSDNVLRRVSDIETVAKLLEKHENFYTSKFAHQELTYSSCRPLEYLTNEIXLKER

Query:  MFSYRMDPSKLLEDNIDNGFNGICWNVANLGKEKLVENQAIIPL
         F Y+M+ SK LE+N+D  F  I   + N+G++   ENQ +I L
Subjt:  MFSYRMDPSKLLEDNIDNGFNGICWNVANLGKEKLVENQAIIPL

A0A5D3CQJ5 Retrovirus-related Pol polyprotein from transposon TNT 1-949.54e-2138.19Show/hide
Query:  KKIKVLLVRQKMMKALDDSSKFPETVTERKKQKINEFACSTLIVHLSDNVLRRVSDIETVAKLLEKHENFYTSKFAHQELTYSSCRPLEYLTNEIXLKER
        KKI+ +LV+ K+ K LD+  + P+ +TE +K+ ++E A ST++++LSD VLR V +  T  +L +K E+ Y +K                L N+I +KE+
Subjt:  KKIKVLLVRQKMMKALDDSSKFPETVTERKKQKINEFACSTLIVHLSDNVLRRVSDIETVAKLLEKHENFYTSKFAHQELTYSSCRPLEYLTNEIXLKER

Query:  MFSYRMDPSKLLEDNIDNGFNGICWNVANLGKEKLVENQAIIPL
         F Y+MD SK LE+N+D  F  I  ++ N+G++   ENQA I L
Subjt:  MFSYRMDPSKLLEDNIDNGFNGICWNVANLGKEKLVENQAIIPL

SwissProt top hitse value%identityAlignment
P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-948.3e-0929.17Show/hide
Query:  KKIKVLLVRQKMMKALDDSSKFPETVTERKKQKINEFACSTLIVHLSDNVLRRVSDIETVAKLLEKHENFYTSKFAHQELTYSSCRPLEYLTNEIXLKER
        ++++ LL++Q + K LD  SK P+T+       ++E A S + +HLSD+V+  + D +T   +  + E+ Y SK                LTN++ LK++
Subjt:  KKIKVLLVRQKMMKALDDSSKFPETVTERKKQKINEFACSTLIVHLSDNVLRRVSDIETVAKLLEKHENFYTSKFAHQELTYSSCRPLEYLTNEIXLKER

Query:  MFSYRMDPSKLLEDNIDNGFNGICWNVANLGKEKLVENQAIIPL
        +++  M        ++ N FNG+   +ANLG +   E++AI+ L
Subjt:  MFSYRMDPSKLLEDNIDNGFNGICWNVANLGKEKLVENQAIIPL

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAAAAAATTAAAGTGCTTCTTGTTCGGCAAAAGATGATGAAGGCTCTCGATGACTCTAGTAAGTTTCCCGAAACTGTCACCGAAAGAAAAAAACAGAAAATTAAT
GAATTTGCTTGTAGTACCTTAATAGTTCATCTTTCAGATAATGTTTTGAGGAGGGTTAGCGACATCGAAACTGTGGCAAAACTTCTGGAGAAACATGAAAATTTT
TATACATCTAAGTTTGCCCACCAAGAACTCACCTACAGCTCCTGCCGTCCGCTTGAATATTTGACAAACGAGATTTAGTTGAAAGAAAGAATGTTTAGCTATAGG
ATGGATCCTTCAAAATTATTGGAGGATAATATAGATAATGGATTCAATGGTATTTGTTGGAACGTGGCTAATTTAGGGAAAGAAAAATTAGTGGAGAATCAAGCA
ATAATCCCTCTT
mRNA sequenceShow/hide mRNA sequence
AAAAAAATTAAAGTGCTTCTTGTTCGGCAAAAGATGATGAAGGCTCTCGATGACTCTAGTAAGTTTCCCGAAACTGTCACCGAAAGAAAAAAACAGAAAATTAAT
GAATTTGCTTGTAGTACCTTAATAGTTCATCTTTCAGATAATGTTTTGAGGAGGGTTAGCGACATCGAAACTGTGGCAAAACTTCTGGAGAAACATGAAAATTTT
TATACATCTAAGTTTGCCCACCAAGAACTCACCTACAGCTCCTGCCGTCCGCTTGAATATTTGACAAACGAGATTTAGTTGAAAGAAAGAATGTTTAGCTATAGG
ATGGATCCTTCAAAATTATTGGAGGATAATATAGATAATGGATTCAATGGTATTTGTTGGAACGTGGCTAATTTAGGGAAAGAAAAATTAGTGGAGAATCAAGCA
ATAATCCCTCTT
Protein sequenceShow/hide protein sequence
KKIKVLLVRQKMMKALDDSSKFPETVTERKKQKINEFACSTLIVHLSDNVLRRVSDIETVAKLLEKHENFYTSKFAHQELTYSSCRPLEYLTNEIULKERMFSYR
MDPSKLLEDNIDNGFNGICWNVANLGKEKLVENQAIIPL