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MC02g1341 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC02g1341
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionRibonuclease T(2)
Genome locationMC02:15913076..15913702
RNA-Seq ExpressionMC02g1341
SyntenyMC02g1341
Gene Ontology termsGO:0016070 - RNA metabolic process (biological process)
GO:0003723 - RNA binding (molecular function)
GO:0033897 - ribonuclease T2 activity (molecular function)
InterPro domainsIPR001568 - Ribonuclease T2-like
IPR018188 - Ribonuclease T2, His active site 1
IPR036430 - Ribonuclease T2-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147499.1 ribonuclease MC [Cucumis sativus]2.64e-3449.3Show/hide
Query:  SFTIHGLWPQDGGTSAQNCW--ETSFLSKRHLENDLNRVWPHVKNGRNMNFWHVGWNKHEVCLVSKFNKNTYFQISINMINGLDLVATLTLDRLGSNHNT
        SFTIHGLWPQ GG S  NC   +  F    HLENDLN VWP+V  G N  FW   WNKH +C  SKF++  YFQ +INM +G+DL++ L    +G N  +
Subjt:  SFTIHGLWPQDGGTSAQNCW--ETSFLSKRHLENDLNRVWPHVKNGRNMNFWHVGWNKHEVCLVSKFNKNTYFQISINMINGLDLVATLTLDRLGSNHNT

Query:  K----IACNMQSKFETEVVLRCKIA-NTQILLVEIVMWFDVD
        K    +   + S F  + +LRCK A N Q+LL EIVM FD D
Subjt:  K----IACNMQSKFETEVVLRCKIA-NTQILLVEIVMWFDVD

XP_008443402.1 PREDICTED: ribonuclease MC-like [Cucumis melo]1.86e-3147.18Show/hide
Query:  SFTIHGLWPQDGGTSAQNCWETSFLSKR--HLENDLNRVWPHVKNGRNMNFWHVGWNKHEVCLVSKFNKNTYFQISINMINGLDLVATLTLDRLGSNHNT
        SFTIHGLWPQ GG S  NC   SF   +  HLE+DLN VWP+V  G N  FW   WNKH +C  SKF++  YFQ +INM + +DL++ L    +  N  +
Subjt:  SFTIHGLWPQDGGTSAQNCWETSFLSKR--HLENDLNRVWPHVKNGRNMNFWHVGWNKHEVCLVSKFNKNTYFQISINMINGLDLVATLTLDRLGSNHNT

Query:  K----IACNMQSKFETEVVLRCKIA-NTQILLVEIVMWFDVD
        K    +   + S F  + +LRCK A N Q+LL EIV+ FD D
Subjt:  K----IACNMQSKFETEVVLRCKIA-NTQILLVEIVMWFDVD

XP_022142280.1 ribonuclease MC-like [Momordica charantia]5.06e-3548.94Show/hide
Query:  SFTIHGLWPQDGGTSAQNCWET--SFLSKRHLENDLNRVWPHVKNGRNMNFWHVGWNKHEVCLVSKFNKNTYFQISINMINGLDLVATLTLDRLGSNHNT
        +FT+HGLWPQ GGTS  NC  T   F    HL+NDLNRVWP+V  G N  FW   WNKH +C  SKF+   YFQ++INM + LDL+  L +  L  N  T
Subjt:  SFTIHGLWPQDGGTSAQNCWET--SFLSKRHLENDLNRVWPHVKNGRNMNFWHVGWNKHEVCLVSKFNKNTYFQISINMINGLDLVATLTLDRLGSNHNT

Query:  KIACNMQS----KFETEVVLRCKIANTQILLVEIVMWFDVD
        K    +QS    +F  E VLRC+     + L+EIVM FD D
Subjt:  KIACNMQS----KFETEVVLRCKIANTQILLVEIVMWFDVD

XP_022155091.1 ribonuclease MC-like [Momordica charantia]2.06e-3349.65Show/hide
Query:  SFTIHGLWPQDGGTSAQNCWET--SFLSKRHLENDLNRVWPHVKNGRNMNFWHVGWNKHEVCLVSKFNKNTYFQISINMINGLDLVATLTLDRLGSNHNT
        +FTIHG+WPQ GGTS  NC  T   F     LE DLNRVWP+V  G N  FW   WNKH VC  SKFN   YFQ++INM N +DL+  L +  L  N  +
Subjt:  SFTIHGLWPQDGGTSAQNCWET--SFLSKRHLENDLNRVWPHVKNGRNMNFWHVGWNKHEVCLVSKFNKNTYFQISINMINGLDLVATLTLDRLGSNHNT

Query:  KIACNMQSKFET----EVVLRCKIANTQILLVEIVMWFDVD
        K    +QS   T    E VLRC+   + I L+EIVM FD D
Subjt:  KIACNMQSKFET----EVVLRCKIANTQILLVEIVMWFDVD

XP_038905534.1 ribonuclease MC-like [Benincasa hispida]3.30e-3246.48Show/hide
Query:  SFTIHGLWPQDGGTSAQNCWETSFLSKR--HLENDLNRVWPHVKNGRNMNFWHVGWNKHEVCLVSKFNKNTYFQISINMINGLDLVATL----TLDRLGS
        SFTIHGLWPQ GG+S  NC   SF   +  HLENDLN VWP+V  G N  FW   WNKH +C  SKF++  YFQ +INM + +DL++ +     +    S
Subjt:  SFTIHGLWPQDGGTSAQNCWETSFLSKR--HLENDLNRVWPHVKNGRNMNFWHVGWNKHEVCLVSKFNKNTYFQISINMINGLDLVATL----TLDRLGS

Query:  NHNTKIACNMQSKFETEVVLRCKIA-NTQILLVEIVMWFDVD
            ++   + S F  + +LRCK A N Q+LL E+VM FD D
Subjt:  NHNTKIACNMQSKFETEVVLRCKIA-NTQILLVEIVMWFDVD

TrEMBL top hitse value%identityAlignment
A0A0A0LC37 Ribonuclease T(2)1.28e-3449.3Show/hide
Query:  SFTIHGLWPQDGGTSAQNCW--ETSFLSKRHLENDLNRVWPHVKNGRNMNFWHVGWNKHEVCLVSKFNKNTYFQISINMINGLDLVATLTLDRLGSNHNT
        SFTIHGLWPQ GG S  NC   +  F    HLENDLN VWP+V  G N  FW   WNKH +C  SKF++  YFQ +INM +G+DL++ L    +G N  +
Subjt:  SFTIHGLWPQDGGTSAQNCW--ETSFLSKRHLENDLNRVWPHVKNGRNMNFWHVGWNKHEVCLVSKFNKNTYFQISINMINGLDLVATLTLDRLGSNHNT

Query:  K----IACNMQSKFETEVVLRCKIA-NTQILLVEIVMWFDVD
        K    +   + S F  + +LRCK A N Q+LL EIVM FD D
Subjt:  K----IACNMQSKFETEVVLRCKIA-NTQILLVEIVMWFDVD

A0A1S3B8Q3 Ribonuclease T(2)9.02e-3247.18Show/hide
Query:  SFTIHGLWPQDGGTSAQNCWETSFLSKR--HLENDLNRVWPHVKNGRNMNFWHVGWNKHEVCLVSKFNKNTYFQISINMINGLDLVATLTLDRLGSNHNT
        SFTIHGLWPQ GG S  NC   SF   +  HLE+DLN VWP+V  G N  FW   WNKH +C  SKF++  YFQ +INM + +DL++ L    +  N  +
Subjt:  SFTIHGLWPQDGGTSAQNCWETSFLSKR--HLENDLNRVWPHVKNGRNMNFWHVGWNKHEVCLVSKFNKNTYFQISINMINGLDLVATLTLDRLGSNHNT

Query:  K----IACNMQSKFETEVVLRCKIA-NTQILLVEIVMWFDVD
        K    +   + S F  + +LRCK A N Q+LL EIV+ FD D
Subjt:  K----IACNMQSKFETEVVLRCKIA-NTQILLVEIVMWFDVD

A0A6J1CKH7 Ribonuclease T(2)2.45e-3548.94Show/hide
Query:  SFTIHGLWPQDGGTSAQNCWET--SFLSKRHLENDLNRVWPHVKNGRNMNFWHVGWNKHEVCLVSKFNKNTYFQISINMINGLDLVATLTLDRLGSNHNT
        +FT+HGLWPQ GGTS  NC  T   F    HL+NDLNRVWP+V  G N  FW   WNKH +C  SKF+   YFQ++INM + LDL+  L +  L  N  T
Subjt:  SFTIHGLWPQDGGTSAQNCWET--SFLSKRHLENDLNRVWPHVKNGRNMNFWHVGWNKHEVCLVSKFNKNTYFQISINMINGLDLVATLTLDRLGSNHNT

Query:  KIACNMQS----KFETEVVLRCKIANTQILLVEIVMWFDVD
        K    +QS    +F  E VLRC+     + L+EIVM FD D
Subjt:  KIACNMQS----KFETEVVLRCKIANTQILLVEIVMWFDVD

A0A6J1DQN7 ribonuclease MC-like9.98e-3449.65Show/hide
Query:  SFTIHGLWPQDGGTSAQNCWET--SFLSKRHLENDLNRVWPHVKNGRNMNFWHVGWNKHEVCLVSKFNKNTYFQISINMINGLDLVATLTLDRLGSNHNT
        +FTIHG+WPQ GGTS  NC  T   F     LE DLNRVWP+V  G N  FW   WNKH VC  SKFN   YFQ++INM N +DL+  L +  L  N  +
Subjt:  SFTIHGLWPQDGGTSAQNCWET--SFLSKRHLENDLNRVWPHVKNGRNMNFWHVGWNKHEVCLVSKFNKNTYFQISINMINGLDLVATLTLDRLGSNHNT

Query:  KIACNMQSKFET----EVVLRCKIANTQILLVEIVMWFDVD
        K    +QS   T    E VLRC+   + I L+EIVM FD D
Subjt:  KIACNMQSKFET----EVVLRCKIANTQILLVEIVMWFDVD

Q40115 Ribonuclease (RNase LC1)1.93e-3045.39Show/hide
Query:  SFTIHGLWPQDGGTSAQNCWETSFLSKR--HLENDLNRVWPHVKNGRNMNFWHVGWNKHEVCLVSKFNKNTYFQISINMINGLDLVATLTLDRLGSNHNT
        SFTIHG+WPQ GGTS  NC   +F   +  HLE+ LN  WP+V  G N  FW   WNKH +C VSKF++  YFQ++INM N +DL++ L +  +  N  +
Subjt:  SFTIHGLWPQDGGTSAQNCWETSFLSKR--HLENDLNRVWPHVKNGRNMNFWHVGWNKHEVCLVSKFNKNTYFQISINMINGLDLVATLTLDRLGSNHNT

Query:  KIACNMQSKFETEV----VLRCKIANTQILLVEIVMWFDVD
        K    +QS    ++    VLRC+    Q  L+EIVM FD D
Subjt:  KIACNMQSKFETEV----VLRCKIANTQILLVEIVMWFDVD

SwissProt top hitse value%identityAlignment
P04007 Ribonuclease S-22.8e-0628.42Show/hide
Query:  SFTIHGLWPQDGGTSAQNCWET---SFLSKRHLENDLNRVWPHVKNGR-----NMNFWHVGWNKHEVCLVSKFNKNTYFQISINMINGLDLVATL
        +FTIHGLWP +  T    C  +   +  +    +NDL+  WP +   +        FW   + KH  C   KF++  YF +++ + +  DL+++L
Subjt:  SFTIHGLWPQDGGTSAQNCWET---SFLSKRHLENDLNRVWPHVKNGR-----NMNFWHVGWNKHEVCLVSKFNKNTYFQISINMINGLDLVATL

P23540 Ribonuclease MC8.3e-1937.5Show/hide
Query:  SFTIHGLWPQDGGTSAQNCWETS---FLSKRHLENDLNRVWPHVKNGRNMNFWHVGWNKHEVCLVSKFNKNTYFQISINMINGLDLVATLTLDRLGSNHN
        +FTIHGLWPQ  GTS  NC + S        HL++ LN +WP+V    N  FW   W KH  C  S FN+  YF+++++M N  D++  L     G N  
Subjt:  SFTIHGLWPQDGGTSAQNCWETS---FLSKRHLENDLNRVWPHVKNGRNMNFWHVGWNKHEVCLVSKFNKNTYFQISINMINGLDLVATLTLDRLGSNHN

Query:  TK----IACNMQSKFETEVVLRCKI-ANTQI-LLVEIVMWFDVD
        TK    I   +++KF     LRC+    T++  LV++V  F  D
Subjt:  TK----IACNMQSKFETEVVLRCKI-ANTQI-LLVEIVMWFDVD

Q38717 Ribonuclease S-42.1e-0630.85Show/hide
Query:  SFTIHGLWPQDGGTSA-QNCWETSF--LSKRHLENDLNRVWPHVKN----GRNMNFWHVGWNKHEVCLVSKFNKNTYFQISINMINGLDLVATL
        +FTIHGLWP +    A Q+C   +F   +   +E  +   WP +K     G + NFW   W KH  C         YF  ++ + + LD++  L
Subjt:  SFTIHGLWPQDGGTSA-QNCWETSF--LSKRHLENDLNRVWPHVKN----GRNMNFWHVGWNKHEVCLVSKFNKNTYFQISINMINGLDLVATL

Q40381 Ribonuclease S-74.3e-0729Show/hide
Query:  SFTIHGLWPQDGGTSAQNCWETSFLSKRHLEN--------DLNRVWPHVKNG-----RNMNFWHVGWNKHEVCLVSKFNKNTYFQISINMINGLDLVATL
        +FTIHGLWP +  T+   C      +K + +N        DL + WP +        ++ NFW   +NKH  C    +N+  YF +++ + +  DL+++L
Subjt:  SFTIHGLWPQDGGTSAQNCWETSFLSKRHLEN--------DLNRVWPHVKNG-----RNMNFWHVGWNKHEVCLVSKFNKNTYFQISINMINGLDLVATL

Q7SID5 Ribonuclease S-F111.5e-0734Show/hide
Query:  SFTIHGLWPQDGGTSAQNCWET---SFLSKRHLENDLNRVWPHVK----NGR-NMNFWHVGWNKHEVCLVSKFNKNTYFQISINMINGLDLVATLTLDRL
        +FTIHGLWP +  T   NC      S+ + + L NDL++ W  +K     GR     W   + KH  C   ++N+NTYF +++ + +  DL+ TL   R+
Subjt:  SFTIHGLWPQDGGTSAQNCWET---SFLSKRHLENDLNRVWPHVK----NGR-NMNFWHVGWNKHEVCLVSKFNKNTYFQISINMINGLDLVATLTLDRL

Arabidopsis top hitse value%identityAlignment
AT1G14210.1 Ribonuclease T2 family protein1.8e-0527.66Show/hide
Query:  FTIHGLWPQ-DGGTSAQNCWETSFLSKRHLEN---DLNRVWPH----VKNGRNMNFWHVGWNKHEVCLVSKFNKNTYFQISINMINGLDLVATL
        F IHGLWPQ + GT    C +T+      + +    + + W             N W   WNKH  C+ S F++++YF+ ++   + + L+  L
Subjt:  FTIHGLWPQ-DGGTSAQNCWETSFLSKRHLEN---DLNRVWPH----VKNGRNMNFWHVGWNKHEVCLVSKFNKNTYFQISINMINGLDLVATL

AT2G39780.1 ribonuclease 28.3e-0632.18Show/hide
Query:  FTIHGLWPQ-DGGTSAQNCWETSFLSKR--HLENDLNRVWPHVK-------NGRNMNFWHVGWNKHEVCLVSKF-NKNTYFQISINM
        FTIHGLWP  + G+    C+ + F  K    L + L + WP +        NG   +FW   W KH  C    F ++  YF  ++N+
Subjt:  FTIHGLWPQ-DGGTSAQNCWETSFLSKR--HLENDLNRVWPHVK-------NGRNMNFWHVGWNKHEVCLVSKF-NKNTYFQISINM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCATTTACGATTCATGGCTTGTGGCCTCAAGATGGAGGGACCTCTGCACAAAATTGTTGGGAAACTTCCTTTTTGTCGAAACGACATTTAGAAAATGATCTTAATAGAGT
TTGGCCCCATGTAAAAAATGGAAGAAATATGAACTTTTGGCATGTAGGTTGGAATAAGCATGAGGTTTGCCTAGTGAGTAAGTTCAATAAAAACACATACTTTCAAATAT
CCATTAATATGATTAATGGTCTCGACCTTGTTGCTACCCTCACACTTGATAGGCTAGGGTCAAACCATAACACAAAGATAGCGTGCAACATGCAATCAAAATTTGAGACT
GAAGTAGTTCTTCGTTGCAAAATAGCTAATACACAGATTCTATTAGTGGAGATTGTGATGTGGTTCGATGTGGAT
mRNA sequenceShow/hide mRNA sequence
TCATTTACGATTCATGGCTTGTGGCCTCAAGATGGAGGGACCTCTGCACAAAATTGTTGGGAAACTTCCTTTTTGTCGAAACGACATTTAGAAAATGATCTTAATAGAGT
TTGGCCCCATGTAAAAAATGGAAGAAATATGAACTTTTGGCATGTAGGTTGGAATAAGCATGAGGTTTGCCTAGTGAGTAAGTTCAATAAAAACACATACTTTCAAATAT
CCATTAATATGATTAATGGTCTCGACCTTGTTGCTACCCTCACACTTGATAGGCTAGGGTCAAACCATAACACAAAGATAGCGTGCAACATGCAATCAAAATTTGAGACT
GAAGTAGTTCTTCGTTGCAAAATAGCTAATACACAGATTCTATTAGTGGAGATTGTGATGTGGTTCGATGTGGAT
Protein sequenceShow/hide protein sequence
SFTIHGLWPQDGGTSAQNCWETSFLSKRHLENDLNRVWPHVKNGRNMNFWHVGWNKHEVCLVSKFNKNTYFQISINMINGLDLVATLTLDRLGSNHNTKIACNMQSKFET
EVVLRCKIANTQILLVEIVMWFDVD