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MC03g0033 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC03g0033
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionPaired amphipathic helix protein Sin3-like 4
Genome locationMC03:440159..440362
RNA-Seq ExpressionMC03g0033
SyntenyMC03g0033
Gene Ontology termsGO:0045892 - negative regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003714 - transcription corepressor activity (molecular function)
InterPro domainsIPR003822 - Paired amphipathic helix
IPR036600 - Paired amphipathic helix superfamily
IPR039774 - Transcriptional regulatory protein Sin3-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5449769.1 hypothetical protein F2P56_030181, partial [Juglans regia]6.11e-2976.47Show/hide
Query:  KLTTNDALQYLKRVKEIFEDKRESYEEFLQVMKDFKARRMDAAGAIARVKDLFIGHRDLILGFNSFLP
        KLTTNDAL YLK VK+IF+DKRE Y++FL+VMKDFKA+R+D  G IARVK+LF GHRDLILGFN+FLP
Subjt:  KLTTNDALQYLKRVKEIFEDKRESYEEFLQVMKDFKARRMDAAGAIARVKDLFIGHRDLILGFNSFLP

XP_022151191.1 paired amphipathic helix protein Sin3-like 4 isoform X1 [Momordica charantia]6.35e-2882.35Show/hide
Query:  KLTTNDALQYLKRVKEIFEDKRESYEEFLQVMKDFKARRMDAAGAIARVKDLFIGHRDLILGFNSFLP
        KLTTNDAL YLKRVK+IF+DKRE YE+FL+VMKDFKA+R+D AG IARVKDLF GHRDLILGFN+FLP
Subjt:  KLTTNDALQYLKRVKEIFEDKRESYEEFLQVMKDFKARRMDAAGAIARVKDLFIGHRDLILGFNSFLP

XP_022151192.1 paired amphipathic helix protein Sin3-like 4 isoform X2 [Momordica charantia]6.35e-2882.35Show/hide
Query:  KLTTNDALQYLKRVKEIFEDKRESYEEFLQVMKDFKARRMDAAGAIARVKDLFIGHRDLILGFNSFLP
        KLTTNDAL YLKRVK+IF+DKRE YE+FL+VMKDFKA+R+D AG IARVKDLF GHRDLILGFN+FLP
Subjt:  KLTTNDALQYLKRVKEIFEDKRESYEEFLQVMKDFKARRMDAAGAIARVKDLFIGHRDLILGFNSFLP

XP_022151193.1 paired amphipathic helix protein Sin3-like 4 isoform X3 [Momordica charantia]6.35e-2882.35Show/hide
Query:  KLTTNDALQYLKRVKEIFEDKRESYEEFLQVMKDFKARRMDAAGAIARVKDLFIGHRDLILGFNSFLP
        KLTTNDAL YLKRVK+IF+DKRE YE+FL+VMKDFKA+R+D AG IARVKDLF GHRDLILGFN+FLP
Subjt:  KLTTNDALQYLKRVKEIFEDKRESYEEFLQVMKDFKARRMDAAGAIARVKDLFIGHRDLILGFNSFLP

XP_023522995.1 paired amphipathic helix protein Sin3-like 4, partial [Cucurbita pepo subsp. pepo]5.44e-2976.47Show/hide
Query:  KLTTNDALQYLKRVKEIFEDKRESYEEFLQVMKDFKARRMDAAGAIARVKDLFIGHRDLILGFNSFLP
        KLTTNDAL+YLK VK+IF DK+E+YE+FL+VMK+FKA+R+D AG IARVK LF GHRDLILGFN+FLP
Subjt:  KLTTNDALQYLKRVKEIFEDKRESYEEFLQVMKDFKARRMDAAGAIARVKDLFIGHRDLILGFNSFLP

TrEMBL top hitse value%identityAlignment
A0A6J1DBI6 paired amphipathic helix protein Sin3-like 4 isoform X33.08e-2882.35Show/hide
Query:  KLTTNDALQYLKRVKEIFEDKRESYEEFLQVMKDFKARRMDAAGAIARVKDLFIGHRDLILGFNSFLP
        KLTTNDAL YLKRVK+IF+DKRE YE+FL+VMKDFKA+R+D AG IARVKDLF GHRDLILGFN+FLP
Subjt:  KLTTNDALQYLKRVKEIFEDKRESYEEFLQVMKDFKARRMDAAGAIARVKDLFIGHRDLILGFNSFLP

A0A6J1DCT7 paired amphipathic helix protein Sin3-like 4 isoform X23.08e-2882.35Show/hide
Query:  KLTTNDALQYLKRVKEIFEDKRESYEEFLQVMKDFKARRMDAAGAIARVKDLFIGHRDLILGFNSFLP
        KLTTNDAL YLKRVK+IF+DKRE YE+FL+VMKDFKA+R+D AG IARVKDLF GHRDLILGFN+FLP
Subjt:  KLTTNDALQYLKRVKEIFEDKRESYEEFLQVMKDFKARRMDAAGAIARVKDLFIGHRDLILGFNSFLP

A0A6J1DDV1 paired amphipathic helix protein Sin3-like 4 isoform X13.08e-2882.35Show/hide
Query:  KLTTNDALQYLKRVKEIFEDKRESYEEFLQVMKDFKARRMDAAGAIARVKDLFIGHRDLILGFNSFLP
        KLTTNDAL YLKRVK+IF+DKRE YE+FL+VMKDFKA+R+D AG IARVKDLF GHRDLILGFN+FLP
Subjt:  KLTTNDALQYLKRVKEIFEDKRESYEEFLQVMKDFKARRMDAAGAIARVKDLFIGHRDLILGFNSFLP

A0A6N2N5M0 Uncharacterized protein5.65e-2979.41Show/hide
Query:  KLTTNDALQYLKRVKEIFEDKRESYEEFLQVMKDFKARRMDAAGAIARVKDLFIGHRDLILGFNSFLP
        KLTTNDAL YLK VK+IF+DKRE Y+EFL+VMKDFKA+R+D AG IARVK+LF GHRDLILGFN+FLP
Subjt:  KLTTNDALQYLKRVKEIFEDKRESYEEFLQVMKDFKARRMDAAGAIARVKDLFIGHRDLILGFNSFLP

A0A7C9AI20 Histone deacetylase (Fragment)1.21e-2875Show/hide
Query:  KLTTNDALQYLKRVKEIFEDKRESYEEFLQVMKDFKARRMDAAGAIARVKDLFIGHRDLILGFNSFLP
        KLTTNDAL YLK VKE+F+DK+E YEEFL+VMKDFKA+R+D +G I RVK+LF GHR+LILGFN+FLP
Subjt:  KLTTNDALQYLKRVKEIFEDKRESYEEFLQVMKDFKARRMDAAGAIARVKDLFIGHRDLILGFNSFLP

SwissProt top hitse value%identityAlignment
O04539 Paired amphipathic helix protein Sin3-like 43.4e-2170.59Show/hide
Query:  KLTTNDALQYLKRVKEIFEDKRESYEEFLQVMKDFKARRMDAAGAIARVKDLFIGHRDLILGFNSFLP
        KLTTNDAL YLK VK+ F+DKR+ Y+EFL+VMKDFKA+R+D  G I RVK+LF G+R+LILGFN+FLP
Subjt:  KLTTNDALQYLKRVKEIFEDKRESYEEFLQVMKDFKARRMDAAGAIARVKDLFIGHRDLILGFNSFLP

O48686 Paired amphipathic helix protein Sin3-like 32.9e-2067.65Show/hide
Query:  KLTTNDALQYLKRVKEIFEDKRESYEEFLQVMKDFKARRMDAAGAIARVKDLFIGHRDLILGFNSFLP
        KLTTNDAL YLK VK+ F+D+R  Y+EFL+VMK+FK++R+D AG I RVK+LF GH++LILGFN+FLP
Subjt:  KLTTNDALQYLKRVKEIFEDKRESYEEFLQVMKDFKARRMDAAGAIARVKDLFIGHRDLILGFNSFLP

Q9LFQ3 Paired amphipathic helix protein Sin3-like 21.1e-1964.71Show/hide
Query:  KLTTNDALQYLKRVKEIFEDKRESYEEFLQVMKDFKARRMDAAGAIARVKDLFIGHRDLILGFNSFLP
        KLTT+DAL YLK VKE+F+D+R+ Y+ FL+VMKDFKA++ D +G I+RVK+LF GH +LI GFN+FLP
Subjt:  KLTTNDALQYLKRVKEIFEDKRESYEEFLQVMKDFKARRMDAAGAIARVKDLFIGHRDLILGFNSFLP

Q9SRH9 Paired amphipathic helix protein Sin3-like 14.5e-2169.12Show/hide
Query:  KLTTNDALQYLKRVKEIFEDKRESYEEFLQVMKDFKARRMDAAGAIARVKDLFIGHRDLILGFNSFLP
        KLTTNDAL YL+ VKE+F+D+RE Y+ FL+VMKDFKA+R D  G IARVK+LF GH +LI GFN+FLP
Subjt:  KLTTNDALQYLKRVKEIFEDKRESYEEFLQVMKDFKARRMDAAGAIARVKDLFIGHRDLILGFNSFLP

Q9XIE1 Paired amphipathic helix protein Sin3-like 54.2e-1968.66Show/hide
Query:  LTTNDALQYLKRVKEIFEDKRESYEEFLQVMKDFKARRMDAAGAIARVKDLFIGHRDLILGFNSFLP
        LTT DAL YLK VK++F+D +E YE FL VMKDFKA+R+D  G IARVKDLF G+ DL+LGFN+FLP
Subjt:  LTTNDALQYLKRVKEIFEDKRESYEEFLQVMKDFKARRMDAAGAIARVKDLFIGHRDLILGFNSFLP

Arabidopsis top hitse value%identityAlignment
AT1G24190.1 SIN3-like 32.1e-2167.65Show/hide
Query:  KLTTNDALQYLKRVKEIFEDKRESYEEFLQVMKDFKARRMDAAGAIARVKDLFIGHRDLILGFNSFLP
        KLTTNDAL YLK VK+ F+D+R  Y+EFL+VMK+FK++R+D AG I RVK+LF GH++LILGFN+FLP
Subjt:  KLTTNDALQYLKRVKEIFEDKRESYEEFLQVMKDFKARRMDAAGAIARVKDLFIGHRDLILGFNSFLP

AT1G24190.2 SIN3-like 32.1e-2167.65Show/hide
Query:  KLTTNDALQYLKRVKEIFEDKRESYEEFLQVMKDFKARRMDAAGAIARVKDLFIGHRDLILGFNSFLP
        KLTTNDAL YLK VK+ F+D+R  Y+EFL+VMK+FK++R+D AG I RVK+LF GH++LILGFN+FLP
Subjt:  KLTTNDALQYLKRVKEIFEDKRESYEEFLQVMKDFKARRMDAAGAIARVKDLFIGHRDLILGFNSFLP

AT1G70060.1 SIN3-like 42.4e-2270.59Show/hide
Query:  KLTTNDALQYLKRVKEIFEDKRESYEEFLQVMKDFKARRMDAAGAIARVKDLFIGHRDLILGFNSFLP
        KLTTNDAL YLK VK+ F+DKR+ Y+EFL+VMKDFKA+R+D  G I RVK+LF G+R+LILGFN+FLP
Subjt:  KLTTNDALQYLKRVKEIFEDKRESYEEFLQVMKDFKARRMDAAGAIARVKDLFIGHRDLILGFNSFLP

AT3G01320.1 SIN3-like 13.2e-2269.12Show/hide
Query:  KLTTNDALQYLKRVKEIFEDKRESYEEFLQVMKDFKARRMDAAGAIARVKDLFIGHRDLILGFNSFLP
        KLTTNDAL YL+ VKE+F+D+RE Y+ FL+VMKDFKA+R D  G IARVK+LF GH +LI GFN+FLP
Subjt:  KLTTNDALQYLKRVKEIFEDKRESYEEFLQVMKDFKARRMDAAGAIARVKDLFIGHRDLILGFNSFLP

AT3G01320.2 SIN3-like 13.2e-2269.12Show/hide
Query:  KLTTNDALQYLKRVKEIFEDKRESYEEFLQVMKDFKARRMDAAGAIARVKDLFIGHRDLILGFNSFLP
        KLTTNDAL YL+ VKE+F+D+RE Y+ FL+VMKDFKA+R D  G IARVK+LF GH +LI GFN+FLP
Subjt:  KLTTNDALQYLKRVKEIFEDKRESYEEFLQVMKDFKARRMDAAGAIARVKDLFIGHRDLILGFNSFLP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAATTAACCACTAACGATGCCCTACAGTATCTCAAGAGAGTGAAGGAAATTTTCGAAGACAAGAGAGAAAGCTACGAAGAATTCCTCCAAGTCATGAAAGATTTCAAGGC
CCGAAGAATGGACGCCGCGGGAGCCATTGCAAGAGTGAAGGATCTGTTCATAGGGCACCGAGATCTCATTTTGGGCTTCAATTCCTTCCTCCCC
mRNA sequenceShow/hide mRNA sequence
AAATTAACCACTAACGATGCCCTACAGTATCTCAAGAGAGTGAAGGAAATTTTCGAAGACAAGAGAGAAAGCTACGAAGAATTCCTCCAAGTCATGAAAGATTTCAAGGC
CCGAAGAATGGACGCCGCGGGAGCCATTGCAAGAGTGAAGGATCTGTTCATAGGGCACCGAGATCTCATTTTGGGCTTCAATTCCTTCCTCCCC
Protein sequenceShow/hide protein sequence
KLTTNDALQYLKRVKEIFEDKRESYEEFLQVMKDFKARRMDAAGAIARVKDLFIGHRDLILGFNSFLP