; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC03g0052 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC03g0052
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionCCT domain-containing protein
Genome locationMC03:684586..686174
RNA-Seq ExpressionMC03g0052
SyntenyMC03g0052
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR010402 - CCT domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022154897.1 zinc finger protein CONSTANS-LIKE 6 isoform X1 [Momordica charantia]1.15e-9078.72Show/hide
Query:  MGYSWFLKSPKEEEQEVPNGAVKGDFEAFLEDKLPPPPPEAEDNFLAYG---------------------------------------VSDDGDGRKKEE
        MGYSWFLKSPKEEEQEVPNGAVKGDFEAFLEDKLPPPPPEAEDNFLAYG                                       VSDDGDGRKKEE
Subjt:  MGYSWFLKSPKEEEQEVPNGAVKGDFEAFLEDKLPPPPPEAEDNFLAYG---------------------------------------VSDDGDGRKKEE

Query:  EEISLKLNLNYEEVLEAWSGRGSLWAAADDSSLSNLTNAAYMGEVPRIEEERRRRVLRYKEKLHNRLFSNKIRYQVRKLNAEKRARIK
        EEISLKLNLNYEEVLEAWSGRGSLWAAADDSSLSNLTNAAYMGEVPRIEEERRRRVLRYKEK HNRLFSNKIRYQVRKLNAEKRARIK
Subjt:  EEISLKLNLNYEEVLEAWSGRGSLWAAADDSSLSNLTNAAYMGEVPRIEEERRRRVLRYKEKLHNRLFSNKIRYQVRKLNAEKRARIK

XP_022154898.1 uncharacterized protein LOC111022043 isoform X2 [Momordica charantia]1.24e-8276.84Show/hide
Query:  MGYSWFLKSPKEEEQEVPNGAVKGDFEAFLEDKLPPPPPEAEDNFLAYG---------------------------------------VSDDGDGRKKEE
        MGYSWFLKSPKEEEQEVPNGAVKGDFEAFLEDKLPPPPPEAEDNFLAYG                                       VSDDGDGRKKEE
Subjt:  MGYSWFLKSPKEEEQEVPNGAVKGDFEAFLEDKLPPPPPEAEDNFLAYG---------------------------------------VSDDGDGRKKEE

Query:  EEISLKLNLNYEEVLEAWSGRGSLWAAADDSSLSNLTNAAYMGEVPRIEEERRRRVLRYKEKLHNRLFSNKIRYQVR
        EEISLKLNLNYEEVLEAWSGRGSLWAAADDSSLSNLTNAAYMGEVPRIEEERRRRVLRYKEK HNRLFSNKIRYQ R
Subjt:  EEISLKLNLNYEEVLEAWSGRGSLWAAADDSSLSNLTNAAYMGEVPRIEEERRRRVLRYKEKLHNRLFSNKIRYQVR

XP_038893944.1 zinc finger protein CONSTANS-LIKE 16 isoform X1 [Benincasa hispida]3.85e-4661.04Show/hide
Query:  MGYSWFLKSPK-EEEQEVPNGAVKGDFEAFLE---DKLPPPPPEAEDNFLAYGVSDDGDGRKKEEE-EISLKLNLNYEEVLEAWSGRGSLWAAADDSSLS
        MG+SW +KSPK E+EQ+VPN   + DF+AF E   ++ PP PP  + ++  +      DG   E + +ISL LNLNYEEVLEAWS RGSLWAAA  S   
Subjt:  MGYSWFLKSPK-EEEQEVPNGAVKGDFEAFLE---DKLPPPPPEAEDNFLAYGVSDDGDGRKKEEE-EISLKLNLNYEEVLEAWSGRGSLWAAADDSSLS

Query:  NLTNAAYMGEVPRIEEERRRRVLRYKEKLHNRLFSNKIRYQVRKLNAEKRARIK
        + T+  YMGEVPR+EEER RRVLRYKEK H RLFS KIRYQVRKLNAEKR RIK
Subjt:  NLTNAAYMGEVPRIEEERRRRVLRYKEKLHNRLFSNKIRYQVRKLNAEKRARIK

XP_038893945.1 zinc finger protein CONSTANS-LIKE 7 isoform X2 [Benincasa hispida]1.16e-4661.04Show/hide
Query:  MGYSWFLKSPK-EEEQEVPNGAVKGDFEAFLE---DKLPPPPPEAEDNFLAYGVSDDGDGRKKEEE-EISLKLNLNYEEVLEAWSGRGSLWAAADDSSLS
        MG+SW +KSPK E+EQ+VPN   + DF+AF E   ++ PP PP  + ++  +      DG   E + +ISL LNLNYEEVLEAWS RGSLWAAA  S   
Subjt:  MGYSWFLKSPK-EEEQEVPNGAVKGDFEAFLE---DKLPPPPPEAEDNFLAYGVSDDGDGRKKEEE-EISLKLNLNYEEVLEAWSGRGSLWAAADDSSLS

Query:  NLTNAAYMGEVPRIEEERRRRVLRYKEKLHNRLFSNKIRYQVRKLNAEKRARIK
        + T+  YMGEVPR+EEER RRVLRYKEK H RLFS KIRYQVRKLNAEKR RIK
Subjt:  NLTNAAYMGEVPRIEEERRRRVLRYKEKLHNRLFSNKIRYQVRKLNAEKRARIK

XP_038893946.1 zinc finger protein CONSTANS-LIKE 7 isoform X3 [Benincasa hispida]6.89e-4761.04Show/hide
Query:  MGYSWFLKSPK-EEEQEVPNGAVKGDFEAFLE---DKLPPPPPEAEDNFLAYGVSDDGDGRKKEEE-EISLKLNLNYEEVLEAWSGRGSLWAAADDSSLS
        MG+SW +KSPK E+EQ+VPN   + DF+AF E   ++ PP PP  + ++  +      DG   E + +ISL LNLNYEEVLEAWS RGSLWAAA  S   
Subjt:  MGYSWFLKSPK-EEEQEVPNGAVKGDFEAFLE---DKLPPPPPEAEDNFLAYGVSDDGDGRKKEEE-EISLKLNLNYEEVLEAWSGRGSLWAAADDSSLS

Query:  NLTNAAYMGEVPRIEEERRRRVLRYKEKLHNRLFSNKIRYQVRKLNAEKRARIK
        + T+  YMGEVPR+EEER RRVLRYKEK H RLFS KIRYQVRKLNAEKR RIK
Subjt:  NLTNAAYMGEVPRIEEERRRRVLRYKEKLHNRLFSNKIRYQVRKLNAEKRARIK

TrEMBL top hitse value%identityAlignment
A0A0A0LYC0 CCT domain-containing protein1.49e-3552.83Show/hide
Query:  YSWFLKSPKEE---EQEV---PNGAVKGDFEAFLE---DKLPPPPPEAEDNF-LAYGVSDDGDGRKKEEEEISLKLNLNYEEVLEAWSGRGSLWAAADDS
        +SW +KSPK+E   EQ+V   P+   + DF AF +   ++ PPPP    D +     V+D  +   K     +L LNLNYEEVLEAWS RGSLWAAA  S
Subjt:  YSWFLKSPKEE---EQEV---PNGAVKGDFEAFLE---DKLPPPPPEAEDNF-LAYGVSDDGDGRKKEEEEISLKLNLNYEEVLEAWSGRGSLWAAADDS

Query:  SLSNLTNAAYMGEVP--RIEEERRRRVLRYKEKLHNRLFSNKIRYQVRKLNAEKRARIK
          ++ T+  YMGEVP  R+EEERRRRV RYKEK   R+F  KIRYQVRKLNA++R RIK
Subjt:  SLSNLTNAAYMGEVP--RIEEERRRRVLRYKEKLHNRLFSNKIRYQVRKLNAEKRARIK

A0A6J1DLJ5 uncharacterized protein LOC111022043 isoform X26.01e-8376.84Show/hide
Query:  MGYSWFLKSPKEEEQEVPNGAVKGDFEAFLEDKLPPPPPEAEDNFLAYG---------------------------------------VSDDGDGRKKEE
        MGYSWFLKSPKEEEQEVPNGAVKGDFEAFLEDKLPPPPPEAEDNFLAYG                                       VSDDGDGRKKEE
Subjt:  MGYSWFLKSPKEEEQEVPNGAVKGDFEAFLEDKLPPPPPEAEDNFLAYG---------------------------------------VSDDGDGRKKEE

Query:  EEISLKLNLNYEEVLEAWSGRGSLWAAADDSSLSNLTNAAYMGEVPRIEEERRRRVLRYKEKLHNRLFSNKIRYQVR
        EEISLKLNLNYEEVLEAWSGRGSLWAAADDSSLSNLTNAAYMGEVPRIEEERRRRVLRYKEK HNRLFSNKIRYQ R
Subjt:  EEISLKLNLNYEEVLEAWSGRGSLWAAADDSSLSNLTNAAYMGEVPRIEEERRRRVLRYKEKLHNRLFSNKIRYQVR

A0A6J1DMX8 zinc finger protein CONSTANS-LIKE 6 isoform X15.55e-9178.72Show/hide
Query:  MGYSWFLKSPKEEEQEVPNGAVKGDFEAFLEDKLPPPPPEAEDNFLAYG---------------------------------------VSDDGDGRKKEE
        MGYSWFLKSPKEEEQEVPNGAVKGDFEAFLEDKLPPPPPEAEDNFLAYG                                       VSDDGDGRKKEE
Subjt:  MGYSWFLKSPKEEEQEVPNGAVKGDFEAFLEDKLPPPPPEAEDNFLAYG---------------------------------------VSDDGDGRKKEE

Query:  EEISLKLNLNYEEVLEAWSGRGSLWAAADDSSLSNLTNAAYMGEVPRIEEERRRRVLRYKEKLHNRLFSNKIRYQVRKLNAEKRARIK
        EEISLKLNLNYEEVLEAWSGRGSLWAAADDSSLSNLTNAAYMGEVPRIEEERRRRVLRYKEK HNRLFSNKIRYQVRKLNAEKRARIK
Subjt:  EEISLKLNLNYEEVLEAWSGRGSLWAAADDSSLSNLTNAAYMGEVPRIEEERRRRVLRYKEKLHNRLFSNKIRYQVRKLNAEKRARIK

A0A6J1HJ00 zinc finger protein CONSTANS-LIKE 61.59e-3467.27Show/hide
Query:  EAEDNFLAYGVSDDGDGRKKEEEEISLKLNLNYEEVLEAWSGRGSLWAAADDSSLSNLTNAAYMGEVPRIEEERRRRVLRYKEKLHNRLFSNKIRYQVRK
        EA    +    S DGDG  K +++ SL LNLNYEEV EAWSGRGSLWA    SS SN T+  YMGEVPR+EEER RRVLRY+EK   RLFSNKIRYQVRK
Subjt:  EAEDNFLAYGVSDDGDGRKKEEEEISLKLNLNYEEVLEAWSGRGSLWAAADDSSLSNLTNAAYMGEVPRIEEERRRRVLRYKEKLHNRLFSNKIRYQVRK

Query:  LNAEKRARIK
        LNA+KR RIK
Subjt:  LNAEKRARIK

A0A6J1I4F9 zinc finger protein CONSTANS-LIKE 61.50e-3748.77Show/hide
Query:  MGYSWFLKSPK---EEEQEVPNGAVKGDFEAFLE----DKLPPPPPEAEDNF-------LAYGVSD----------------------------------
        MGYS  LK  K   EEEQEVPN +++ DF+AF E    +KLP    + ++NF       L + + D                                  
Subjt:  MGYSWFLKSPK---EEEQEVPNGAVKGDFEAFLE----DKLPPPPPEAEDNF-------LAYGVSD----------------------------------

Query:  ------DGDGRKKEEEEISLKLNLNYEEVLEAWSGRGSLWAAADDSSLSNLTNAAYMGEVPRIEEERRRRVLRYKEKLHNRLFSNKIRYQVRKLNAEKRA
              DGDG  K +++ SL LNLNYEEV EAWSGRGSLWAA   SS SN T+  YMGEVPR+EEER RRVLRY+EK   RLFSNKIRYQVRKLNA+KR 
Subjt:  ------DGDGRKKEEEEISLKLNLNYEEVLEAWSGRGSLWAAADDSSLSNLTNAAYMGEVPRIEEERRRRVLRYKEKLHNRLFSNKIRYQVRKLNAEKRA

Query:  RIK
        RIK
Subjt:  RIK

SwissProt top hitse value%identityAlignment
Q8LG76 Zinc finger protein CONSTANS-LIKE 61.6e-1038.52Show/hide
Query:  EAED---NFLAYGVSDDGDGRKKEEEEISLKLNLNYEEVLEAWSGRGSLWAAADDSSLSNLTNAAY----MGEVPRIEEE------------------RR
        E ED   N +  GV++   G K+E++E +L L L+YE V+  W G+G  W A   S + +L    +    MGE                         R 
Subjt:  EAED---NFLAYGVSDDGDGRKKEEEEISLKLNLNYEEVLEAWSGRGSLWAAADDSSLSNLTNAAY----MGEVPRIEEE------------------RR

Query:  RRVLRYKEKLHNRLFSNKIRYQVRKLNAEKRARIK
         RV RY+EK   RLFS KIRY+VRKLNAEKR R+K
Subjt:  RRVLRYKEKLHNRLFSNKIRYQVRKLNAEKRARIK

Q8RWD0 Zinc finger protein CONSTANS-LIKE 161.9e-0838.05Show/hide
Query:  KKEEEEISLKLNLNYEEVLEAWSGRGSLWAAADD-------------SSLSNLTNAAYM-----GEVPRI---EEERRRRVLRYKEKLHNRLFSNKIRYQ
        K+EE +  L L LNY+ V+  W G+G  W++ +              S + N   + +      G +P     +  R  RV RY+EK   RLFS KIRY+
Subjt:  KKEEEEISLKLNLNYEEVLEAWSGRGSLWAAADD-------------SSLSNLTNAAYM-----GEVPRI---EEERRRRVLRYKEKLHNRLFSNKIRYQ

Query:  VRKLNAEKRARIK
        VRKLNAEKR R+K
Subjt:  VRKLNAEKRARIK

Q9C9A9 Zinc finger protein CONSTANS-LIKE 73.3e-0835.2Show/hide
Query:  LKSPKEEEQ-----EVPN--GAVKGD----FEAFLED--KLPPPPPEAEDNFLAYGVSDDGD--GRKKEEEEISLKLNLNYEEVLEAWSGRGSLWAAA--
        ++S  EEEQ     + PN  G +K +    FE   +D  ++     E E+     G S D D      ++ + SL L L+Y  V+ AW   GS W     
Subjt:  LKSPKEEEQ-----EVPN--GAVKGD----FEAFLED--KLPPPPPEAEDNFLAYGVSDDGD--GRKKEEEEISLKLNLNYEEVLEAWSGRGSLWAAA--

Query:  DDSSLSNLTNAAYM-----------GEVPR--------IEEERRRRVLRYKEKLHNRLFSNKIRYQVRKLNAEKRARIK
         +  L   T   ++           G V R         + ER  RVLRYKEK   RLFS KIRY+VRKLNAE+R RIK
Subjt:  DDSSLSNLTNAAYM-----------GEVPR--------IEEERRRRVLRYKEKLHNRLFSNKIRYQVRKLNAEKRARIK

Q9LU68 Protein CHLOROPLAST IMPORT APPARATUS 25.6e-0844.9Show/hide
Query:  KEEEEISLK-----LNLNYEEVLEAWSGRGSLWAAADDSSLSNLTNAAYMGEVPRIEEE--RRRRVLRYKEKLHNRLFSNKIRYQVRKLNAEKRARIK
        ++ EE SLK     L L+Y+ VLEAWS + S +      S +   NA  + ++    +   R   VLRYKEK   RLFS KIRYQVRKLNA++R R+K
Subjt:  KEEEEISLK-----LNLNYEEVLEAWSGRGSLWAAADDSSLSNLTNAAYMGEVPRIEEE--RRRRVLRYKEKLHNRLFSNKIRYQVRKLNAEKRARIK

Q9M9B3 Zinc finger protein CONSTANS-LIKE 83.3e-0842.53Show/hide
Query:  EISLKLNLNYEEVLEAWSGRGSLWAAADDSSLSNLTNAAYMGEVPRIEEERRRRVLRYKEKLHNRLFSNKIRYQVRKLNAEKRARIK
        E + +  LNYE V+ AW  + S     +++S   L       E  R+  ER  RV RY++K  NRLF  KIRY+VRK+NA+KR R+K
Subjt:  EISLKLNLNYEEVLEAWSGRGSLWAAADDSSLSNLTNAAYMGEVPRIEEERRRRVLRYKEKLHNRLFSNKIRYQVRKLNAEKRARIK

Arabidopsis top hitse value%identityAlignment
AT1G07050.1 CCT motif family protein3.6e-1855.79Show/hide
Query:  EEEEISLKLNLNYEEVLEAWSG-RGSLWAAADDSSLSNLTNAAYMGEVPRIEEERRRR----VLRYKEKLHNRLFSNKIRYQVRKLNAEKRARIK
        E++++ LKLNLN++EV++AWS  +  LW     +  S L N+ Y GEVP IEE+R  R    VLRYKEK  +RLFS KIRYQVRKLNA+KR R K
Subjt:  EEEEISLKLNLNYEEVLEAWSG-RGSLWAAADDSSLSNLTNAAYMGEVPRIEEERRRR----VLRYKEKLHNRLFSNKIRYQVRKLNAEKRARIK

AT1G68520.1 B-box type zinc finger protein with CCT domain1.1e-1138.52Show/hide
Query:  EAED---NFLAYGVSDDGDGRKKEEEEISLKLNLNYEEVLEAWSGRGSLWAAADDSSLSNLTNAAY----MGEVPRIEEE------------------RR
        E ED   N +  GV++   G K+E++E +L L L+YE V+  W G+G  W A   S + +L    +    MGE                         R 
Subjt:  EAED---NFLAYGVSDDGDGRKKEEEEISLKLNLNYEEVLEAWSGRGSLWAAADDSSLSNLTNAAY----MGEVPRIEEE------------------RR

Query:  RRVLRYKEKLHNRLFSNKIRYQVRKLNAEKRARIK
         RV RY+EK   RLFS KIRY+VRKLNAEKR R+K
Subjt:  RRVLRYKEKLHNRLFSNKIRYQVRKLNAEKRARIK

AT4G25990.1 CCT motif family protein5.0e-1246.08Show/hide
Query:  SDDGDGRKKEEEEISLKLNLNYEEVLEAWSGRGSLWA-AADDSSLSNLTNAAYMGEVPRIEEE--RRRRVLRYKEKLHNRLFSNKIRYQVRKLNAEKRAR
        S+  D   K E+ +S  L L+Y+ VLEAWSG+ S ++     S    +     +GE+    E   R   VLRYKEK  NRLFS KIRYQVRKLNA++R R
Subjt:  SDDGDGRKKEEEEISLKLNLNYEEVLEAWSGRGSLWA-AADDSSLSNLTNAAYMGEVPRIEEE--RRRRVLRYKEKLHNRLFSNKIRYQVRKLNAEKRAR

Query:  IK
        +K
Subjt:  IK

AT4G25990.2 CCT motif family protein5.0e-1246.08Show/hide
Query:  SDDGDGRKKEEEEISLKLNLNYEEVLEAWSGRGSLWA-AADDSSLSNLTNAAYMGEVPRIEEE--RRRRVLRYKEKLHNRLFSNKIRYQVRKLNAEKRAR
        S+  D   K E+ +S  L L+Y+ VLEAWSG+ S ++     S    +     +GE+    E   R   VLRYKEK  NRLFS KIRYQVRKLNA++R R
Subjt:  SDDGDGRKKEEEEISLKLNLNYEEVLEAWSGRGSLWA-AADDSSLSNLTNAAYMGEVPRIEEE--RRRRVLRYKEKLHNRLFSNKIRYQVRKLNAEKRAR

Query:  IK
        +K
Subjt:  IK

AT5G14370.1 CCT motif family protein1.3e-1241.18Show/hide
Query:  GVSDDGDGRKKEEEEISLKLNLNYEEVLEAWSGRGSLWA-----------AADDSSLSNLTNAAYMGEVPRIEE-------ERRRRVLRYKEKLHNRLFS
        G  D  DGR       SL L L+YE+++EAWS +G+L+             A     ++   A  +  VP +E         R   +LRYKEK  NRLFS
Subjt:  GVSDDGDGRKKEEEEISLKLNLNYEEVLEAWSGRGSLWA-----------AADDSSLSNLTNAAYMGEVPRIEE-------ERRRRVLRYKEKLHNRLFS

Query:  NKIRYQVRKLNAEKRARIK
         +IRYQVRKLNAEKR R+K
Subjt:  NKIRYQVRKLNAEKRARIK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTACAGTTGGTTCCTGAAGAGCCCAAAGGAAGAAGAACAAGAAGTTCCAAACGGCGCCGTAAAAGGGGATTTCGAAGCCTTTCTGGAGGACAAGCTGCCGCCGCC
GCCACCGGAGGCGGAGGATAACTTCTTGGCCTACGGCGTCTCCGACGACGGCGATGGCAGGAAGAAGGAGGAGGAGGAGATTTCGCTGAAGTTAAATCTAAACTATGAAG
AGGTTTTGGAGGCATGGTCCGGCCGTGGGTCTCTGTGGGCCGCCGCCGACGACTCTTCTCTTTCAAACTTAACCAATGCCGCTTATATGGGAGAGGTTCCAAGAATAGAA
GAAGAACGAAGAAGAAGAGTATTGAGATACAAAGAGAAGCTCCACAACAGATTGTTCTCAAACAAGATAAGATACCAGGTTCGTAAGCTCAATGCAGAAAAAAGGGCAAG
AATAAAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTTACAGTTGGTTCCTGAAGAGCCCAAAGGAAGAAGAACAAGAAGTTCCAAACGGCGCCGTAAAAGGGGATTTCGAAGCCTTTCTGGAGGACAAGCTGCCGCCGCC
GCCACCGGAGGCGGAGGATAACTTCTTGGCCTACGGCGTCTCCGACGACGGCGATGGCAGGAAGAAGGAGGAGGAGGAGATTTCGCTGAAGTTAAATCTAAACTATGAAG
AGGTTTTGGAGGCATGGTCCGGCCGTGGGTCTCTGTGGGCCGCCGCCGACGACTCTTCTCTTTCAAACTTAACCAATGCCGCTTATATGGGAGAGGTTCCAAGAATAGAA
GAAGAACGAAGAAGAAGAGTATTGAGATACAAAGAGAAGCTCCACAACAGATTGTTCTCAAACAAGATAAGATACCAGGTTCGTAAGCTCAATGCAGAAAAAAGGGCAAG
AATAAAG
Protein sequenceShow/hide protein sequence
MGYSWFLKSPKEEEQEVPNGAVKGDFEAFLEDKLPPPPPEAEDNFLAYGVSDDGDGRKKEEEEISLKLNLNYEEVLEAWSGRGSLWAAADDSSLSNLTNAAYMGEVPRIE
EERRRRVLRYKEKLHNRLFSNKIRYQVRKLNAEKRARIK