; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC03g0100 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC03g0100
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionThylakoid soluble phosphoprotein TSP
Genome locationMC03:1535758..1536009
RNA-Seq ExpressionMC03g0100
SyntenyMC03g0100
Gene Ontology termsNA
InterPro domainsIPR021584 - Thylakoid soluble phosphoprotein TSP9
IPR037244 - Thylakoid soluble phosphoprotein TSP9 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3970478.1 hypothetical protein CMV_005832 [Castanea mollissima]2.39e-3985.56Show/hide
Query:  MASLAVAFSPAAGRVFAATAAKGAGGSKEEKGLLDWILGGLQKEDQLLETDPILKKVEEKN-----DGRKNSVPVPQKKKGG-FGGLFSK
        MASL +AF+PAAGRVFAATAAKGAGGSKEEKGLLDWI+GGLQKEDQLLETDPILKKVEEKN     +GRKNSV VPQKKKGG FGGLF+K
Subjt:  MASLAVAFSPAAGRVFAATAAKGAGGSKEEKGLLDWILGGLQKEDQLLETDPILKKVEEKN-----DGRKNSVPVPQKKKGG-FGGLFSK
XP_007146732.1 hypothetical protein PHAVU_006G065100g [Phaseolus vulgaris]1.19e-3983.33Show/hide
Query:  MASLAVAFSPAAGRVFAATAAKGAGGSKEEKGLLDWILGGLQKEDQLLETDPILKKVEEKN------DGRKNSVPVPQKKKGGFGGLFSK
        MAS+ ++FSPA GRVFAATAAKGAGGSKEEKG LDWILGGLQKEDQLLETDPILKKVEEKN      +GRKNSV VPQKKKGGFGGLF+K
Subjt:  MASLAVAFSPAAGRVFAATAAKGAGGSKEEKGLLDWILGGLQKEDQLLETDPILKKVEEKN------DGRKNSVPVPQKKKGGFGGLFSK
XP_022150888.1 uncharacterized protein LOC111018931 [Momordica charantia]5.73e-48100Show/hide
Query:  MASLAVAFSPAAGRVFAATAAKGAGGSKEEKGLLDWILGGLQKEDQLLETDPILKKVEEKNDGRKNSVPVPQKKKGGFGGLFSK
        MASLAVAFSPAAGRVFAATAAKGAGGSKEEKGLLDWILGGLQKEDQLLETDPILKKVEEKNDGRKNSVPVPQKKKGGFGGLFSK
Subjt:  MASLAVAFSPAAGRVFAATAAKGAGGSKEEKGLLDWILGGLQKEDQLLETDPILKKVEEKNDGRKNSVPVPQKKKGGFGGLFSK
XP_023927584.1 uncharacterized protein LOC112038986 [Quercus suber]6.86e-3984.44Show/hide
Query:  MASLAVAFSPAAGRVFAATAAKGAGGSKEEKGLLDWILGGLQKEDQLLETDPILKKVEEKN-----DGRKNSVPVPQKKKGG-FGGLFSK
        MASL +AF+PAAGRVFAATAAKGAGGSKEEKGLLDWI+GGLQKEDQLLETDPILKKVEEK+     +GRKNSV VPQKKKGG FGGLF+K
Subjt:  MASLAVAFSPAAGRVFAATAAKGAGGSKEEKGLLDWILGGLQKEDQLLETDPILKKVEEKN-----DGRKNSVPVPQKKKGG-FGGLFSK
XP_030925866.1 uncharacterized protein LOC115952739 [Quercus lobata]2.39e-3985.56Show/hide
Query:  MASLAVAFSPAAGRVFAATAAKGAGGSKEEKGLLDWILGGLQKEDQLLETDPILKKVEEKN-----DGRKNSVPVPQKKKGG-FGGLFSK
        MASL +AF+PAAGRVFAATAAKGAGGSKEEKGLLDWI+GGLQKEDQLLETDPILKKVEEKN     +GRKNSV VPQKKKGG FGGLF+K
Subjt:  MASLAVAFSPAAGRVFAATAAKGAGGSKEEKGLLDWILGGLQKEDQLLETDPILKKVEEKN-----DGRKNSVPVPQKKKGG-FGGLFSK
TrEMBL top hitse value%identityAlignment
A0A0B2PFF3 Uncharacterized protein6.91e-3981.32Show/hide
Query:  MASLAVAFSPAAGRVFAATAAKGAGGSKEEKGLLDWILGGLQKEDQLLETDPILKKVEEKNDG-------RKNSVPVPQKKKGGFGGLFSK
        MAS+ ++F+PA GRVFAATAAKGAGGSKEEKGLLDWILGGLQKEDQLLETDPILKKVEEKN G        KNSV VPQKKKGGFGGLF+K
Subjt:  MASLAVAFSPAAGRVFAATAAKGAGGSKEEKGLLDWILGGLQKEDQLLETDPILKKVEEKNDG-------RKNSVPVPQKKKGGFGGLFSK
A0A6J1D9Q5 uncharacterized protein LOC1110189312.77e-48100Show/hide
Query:  MASLAVAFSPAAGRVFAATAAKGAGGSKEEKGLLDWILGGLQKEDQLLETDPILKKVEEKNDGRKNSVPVPQKKKGGFGGLFSK
        MASLAVAFSPAAGRVFAATAAKGAGGSKEEKGLLDWILGGLQKEDQLLETDPILKKVEEKNDGRKNSVPVPQKKKGGFGGLFSK
Subjt:  MASLAVAFSPAAGRVFAATAAKGAGGSKEEKGLLDWILGGLQKEDQLLETDPILKKVEEKNDGRKNSVPVPQKKKGGFGGLFSK
A0A7N2KPW5 Uncharacterized protein1.16e-3985.56Show/hide
Query:  MASLAVAFSPAAGRVFAATAAKGAGGSKEEKGLLDWILGGLQKEDQLLETDPILKKVEEKN-----DGRKNSVPVPQKKKGG-FGGLFSK
        MASL +AF+PAAGRVFAATAAKGAGGSKEEKGLLDWI+GGLQKEDQLLETDPILKKVEEKN     +GRKNSV VPQKKKGG FGGLF+K
Subjt:  MASLAVAFSPAAGRVFAATAAKGAGGSKEEKGLLDWILGGLQKEDQLLETDPILKKVEEKN-----DGRKNSVPVPQKKKGG-FGGLFSK
I1N020 Uncharacterized protein6.91e-3981.32Show/hide
Query:  MASLAVAFSPAAGRVFAATAAKGAGGSKEEKGLLDWILGGLQKEDQLLETDPILKKVEEKNDG-------RKNSVPVPQKKKGGFGGLFSK
        MAS+ ++F+PA GRVFAATAAKGAGGSKEEKGLLDWILGGLQKEDQLLETDPILKKVEEKN G        KNSV VPQKKKGGFGGLF+K
Subjt:  MASLAVAFSPAAGRVFAATAAKGAGGSKEEKGLLDWILGGLQKEDQLLETDPILKKVEEKNDG-------RKNSVPVPQKKKGGFGGLFSK
V7BQ66 Uncharacterized protein5.74e-4083.33Show/hide
Query:  MASLAVAFSPAAGRVFAATAAKGAGGSKEEKGLLDWILGGLQKEDQLLETDPILKKVEEKN------DGRKNSVPVPQKKKGGFGGLFSK
        MAS+ ++FSPA GRVFAATAAKGAGGSKEEKG LDWILGGLQKEDQLLETDPILKKVEEKN      +GRKNSV VPQKKKGGFGGLF+K
Subjt:  MASLAVAFSPAAGRVFAATAAKGAGGSKEEKGLLDWILGGLQKEDQLLETDPILKKVEEKN------DGRKNSVPVPQKKKGGFGGLFSK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G47070.1 LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thylakoid soluble phosphoprotein TSP9 (InterPro:IPR021584); Has 37 Blast hits to 37 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).2.3e-1447.37Show/hide
Query:  MASLAVAFSPAAGRVFAATAAKGAGGSKEEKGLLDWILGGLQKEDQLLETDPILKKVEEKND----------GRKNS--VPVPQKKKGGFGGLFS
        ++SL ++F+PA  RV+A +   G+GG KEEK  +D++LG + K+DQ  ET+P+LKKV+EK            G KNS   PVP+K +GGFGGL S
Subjt:  MASLAVAFSPAAGRVFAATAAKGAGGSKEEKGLLDWILGGLQKEDQLLETDPILKKVEEKND----------GRKNS--VPVPQKKKGGFGGLFS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCTCTCGCAGTAGCATTCTCTCCGGCCGCCGGAAGAGTTTTCGCGGCGACGGCTGCCAAGGGCGCCGGCGGAAGCAAGGAGGAGAAAGGACTTCTCGATTGGAT
TTTAGGAGGACTACAGAAAGAGGATCAGCTTCTCGAGACCGATCCGATCCTGAAGAAAGTGGAGGAGAAGAACGACGGCCGGAAAAACTCCGTGCCGGTGCCGCAGAAGA
AGAAAGGAGGATTCGGAGGACTGTTTTCCAAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCTCTCGCAGTAGCATTCTCTCCGGCCGCCGGAAGAGTTTTCGCGGCGACGGCTGCCAAGGGCGCCGGCGGAAGCAAGGAGGAGAAAGGACTTCTCGATTGGAT
TTTAGGAGGACTACAGAAAGAGGATCAGCTTCTCGAGACCGATCCGATCCTGAAGAAAGTGGAGGAGAAGAACGACGGCCGGAAAAACTCCGTGCCGGTGCCGCAGAAGA
AGAAAGGAGGATTCGGAGGACTGTTTTCCAAG
Protein sequenceShow/hide protein sequence
MASLAVAFSPAAGRVFAATAAKGAGGSKEEKGLLDWILGGLQKEDQLLETDPILKKVEEKNDGRKNSVPVPQKKKGGFGGLFSK