CuGenDBv2

Gene ID	MC03g0128
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Ribulose bisphosphate carboxylase large chain
Genome location	MC03:2079553..2079855
RNA-Seq Expression	MC03g0128
Synteny	MC03g0128
Gene Ontology terms	GO:0009853 - photorespiration (biological process) GO:0019253 - reductive pentose-phosphate cycle (biological process) GO:0009507 - chloroplast (cellular component) GO:0000287 - magnesium ion binding (molecular function) GO:0004497 - monooxygenase activity (molecular function) GO:0016984 - ribulose-bisphosphate carboxylase activity (molecular function)
InterPro domains	IPR000685 - Ribulose bisphosphate carboxylase, large subunit, C-terminal IPR017443 - Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal IPR020878 - Ribulose bisphosphate carboxylase, large chain, active site IPR033966 - RuBisCO IPR036376 - Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily IPR036422 - RuBisCO large subunit, N-terminal domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

AKE43422.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Liriodendron chinense]

3.44e-70

99.01

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Query:  MFTSIVGNVFGFKALRALRLEDLRIPPAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWR
        MFTSIVGNVFGFKALRALRLEDLRIPPAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWR
Subjt:  MFTSIVGNVFGFKALRALRLEDLRIPPAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWR

Query:  E
        +
Subjt:  E

AKE43700.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Lomatogoniopsis alpina]

4.89e-70

98.02

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Query:  MFTSIVGNVFGFKALRALRLEDLRIPPAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWR
        MFTSIVGNVFGFKALRALRLEDLRIPPAY+KTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWR
Subjt:  MFTSIVGNVFGFKALRALRLEDLRIPPAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWR

Query:  E
        +
Subjt:  E

ASM56368.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Berberidopsis corallina]

3.93e-70

99.01

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Query:  MFTSIVGNVFGFKALRALRLEDLRIPPAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWR
        MFTSIVGNVFGFKALRALRLEDLRIPPAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWR
Subjt:  MFTSIVGNVFGFKALRALRLEDLRIPPAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWR

Query:  E
        +
Subjt:  E

ASM56374.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Berberidopsis corallina]

1.30e-70

99.01

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Query:  MFTSIVGNVFGFKALRALRLEDLRIPPAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWR
        MFTSIVGNVFGFKALRALRLEDLRIPPAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWR
Subjt:  MFTSIVGNVFGFKALRALRLEDLRIPPAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWR

Query:  E
        +
Subjt:  E

QXO84479.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Solanum virginianum]

2.11e-70

99.01

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Query:  MFTSIVGNVFGFKALRALRLEDLRIPPAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWR
        MFTSIVGNVFGFKALRALRLEDLRIPPAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWR
Subjt:  MFTSIVGNVFGFKALRALRLEDLRIPPAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWR

Query:  E
        +
Subjt:  E

TrEMBL top hits

e value

%identity

Alignment

A0A0B4JTB0 Ribulose bisphosphate carboxylase large chain (Fragment)

2.80e-70

99.01

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Query:  MFTSIVGNVFGFKALRALRLEDLRIPPAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWR
        MFTSIVGNVFGFKALRALRLEDLRIPPAY+KTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWR
Subjt:  MFTSIVGNVFGFKALRALRLEDLRIPPAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWR

Query:  E
        E
Subjt:  E

A0A0F6TFJ6 Ribulose bisphosphate carboxylase large chain (Fragment)

1.67e-70

99.01

Show/hide

Query:  MFTSIVGNVFGFKALRALRLEDLRIPPAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWR
        MFTSIVGNVFGFKALRALRLEDLRIPPAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWR
Subjt:  MFTSIVGNVFGFKALRALRLEDLRIPPAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWR

Query:  E
        +
Subjt:  E

A0A0F6TG62 Ribulose bisphosphate carboxylase large chain (Fragment)

2.37e-70

98.02

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Query:  MFTSIVGNVFGFKALRALRLEDLRIPPAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWR
        MFTSIVGNVFGFKALRALRLEDLRIPPAY+KTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWR
Subjt:  MFTSIVGNVFGFKALRALRLEDLRIPPAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWR

Query:  E
        +
Subjt:  E

A0A2D0XTT6 Ribulose bisphosphate carboxylase large chain (Fragment)

6.28e-71

99.01

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Query:  MFTSIVGNVFGFKALRALRLEDLRIPPAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWR
        MFTSIVGNVFGFKALRALRLEDLRIPPAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWR
Subjt:  MFTSIVGNVFGFKALRALRLEDLRIPPAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWR

Query:  E
        +
Subjt:  E

A0A2D0XVH5 Ribulose bisphosphate carboxylase large chain (Fragment)

1.90e-70

99.01

Show/hide

Query:  MFTSIVGNVFGFKALRALRLEDLRIPPAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWR
        MFTSIVGNVFGFKALRALRLEDLRIPPAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWR
Subjt:  MFTSIVGNVFGFKALRALRLEDLRIPPAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWR

Query:  E
        +
Subjt:  E

SwissProt top hits

e value

%identity

Alignment

O98883 Ribulose bisphosphate carboxylase large chain (Fragment)

8.3e-56

99.01

Show/hide

Query:  MFTSIVGNVFGFKALRALRLEDLRIPPAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWR
        MFTSIVGNVFGFKALRALRLEDLRIPPAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWR
Subjt:  MFTSIVGNVFGFKALRALRLEDLRIPPAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWR

Query:  E
        +
Subjt:  E

P28410 Ribulose bisphosphate carboxylase large chain (Fragment)

8.3e-56

99.01

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Query:  MFTSIVGNVFGFKALRALRLEDLRIPPAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWR
        MFTSIVGNVFGFKALRALRLEDLRIPPAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWR
Subjt:  MFTSIVGNVFGFKALRALRLEDLRIPPAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWR

Query:  E
        +
Subjt:  E

P48688 Ribulose bisphosphate carboxylase large chain

8.3e-56

99.01

Show/hide

Query:  MFTSIVGNVFGFKALRALRLEDLRIPPAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWR
        MFTSIVGNVFGFKALRALRLEDLRIPPAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWR
Subjt:  MFTSIVGNVFGFKALRALRLEDLRIPPAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWR

Query:  E
        +
Subjt:  E

Q05989 Ribulose bisphosphate carboxylase large chain (Fragment)

8.3e-56

99.01

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Query:  MFTSIVGNVFGFKALRALRLEDLRIPPAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWR
        MFTSIVGNVFGFKALRALRLEDLRIPPAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWR
Subjt:  MFTSIVGNVFGFKALRALRLEDLRIPPAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWR

Query:  E
        +
Subjt:  E

Q31655 Ribulose bisphosphate carboxylase large chain (Fragment)

8.3e-56

99.01

Show/hide

Query:  MFTSIVGNVFGFKALRALRLEDLRIPPAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWR
        MFTSIVGNVFGFKALRALRLEDLRIPPAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWR
Subjt:  MFTSIVGNVFGFKALRALRLEDLRIPPAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWR

Query:  E
        +
Subjt:  E

Arabidopsis top hits

e value

%identity

Alignment

AT2G07732.1 Ribulose bisphosphate carboxylase large chain, catalytic domain

9.5e-15

94.29

Show/hide

Query:  AKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRE
        AKNYGRAVYECLRGGL FTKDDENVNSQPFMRWR+
Subjt:  AKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRE

ATCG00490.1 ribulose-bisphosphate carboxylases

1.1e-55

97.03

Show/hide

Query:  MFTSIVGNVFGFKALRALRLEDLRIPPAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWR
        MFTSIVGNVFGFKAL ALRLEDLRIPPAY KTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWR
Subjt:  MFTSIVGNVFGFKALRALRLEDLRIPPAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWR

Query:  E
        +
Subjt:  E

ATMG00280.1 Ribulose bisphosphate carboxylase large chain, catalytic domain

9.5e-15

94.29

Show/hide

Query:  AKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRE
        AKNYGRAVYECLRGGL FTKDDENVNSQPFMRWR+
Subjt:  AKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRE

Sequences

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CDS sequence

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ATGTTTACTTCCATTGTGGGTAATGTATTTGGGTTCAAGGCTCTGCGCGCTCTACGTCTGGAGGATTTGCGAATCCCTCCTGCTTATATTAAAACTTTCCAAGGACCGCC
TCATGGTATCCAAGTTGAAAGAGATAAATTGAACAAGTATGGCCGCCCTCTATTGGGATGTACTATTAAACCAAAATTGGGATTATCCGCTAAGAATTATGGTAGAGCAG
TTTATGAATGTCTACGCGGTGGACTTGATTTTACCAAAGATGATGAAAACGTGAATTCCCAACCATTTATGCGTTGGAGAGAG

mRNA sequence

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Protein sequence

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MFTSIVGNVFGFKALRALRLEDLRIPPAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRE

MC03g0128 (gene) of Bitter gourd (Dali-11) v1 genome