; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC03g0139 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC03g0139
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationMC03:2383903..2387857
RNA-Seq ExpressionMC03g0139
SyntenyMC03g0139
Gene Ontology termsGO:0006511 - ubiquitin-dependent protein catabolic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily
IPR044795 - Pentatricopeptide repeat-containing protein THA8L-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008457435.1 PREDICTED: pentatricopeptide repeat-containing protein At3g46870 [Cucumis melo]1.57e-16690.98Show/hide
Query:  MAIRGFSRSKLPIFASVFLRGLTRRPIRDIPLPVKSKITGFQPDSSRPICGFRPYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFMKSHV
        MAIR FSRSKLPIFA VFLRGLTRRPIRD+PLPV S ITGFQPDSSRPI GFR YHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKL KFMKSHV
Subjt:  MAIRGFSRSKLPIFASVFLRGLTRRPIRDIPLPVKSKITGFQPDSSRPICGFRPYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFMKSHV

Query:  SRLLKLDMISVLGELERQEEVALAVKIFRLIQKQDWYKPDVFMYKDLIIALAGSKKMDDAMELWESMRKEDLFPDSQTYTEVIRGFLRYGSPSDAMNIYE
        SRLLKLDM++VLGELERQEEVALAVKIFRLI+KQDWYKPDV++YKDLIIALA SKKMDDAM+LWESMR+E+LFPDSQTYTEVIRGFLRYGSPSDAMN+YE
Subjt:  SRLLKLDMISVLGELERQEEVALAVKIFRLIQKQDWYKPDVFMYKDLIIALAGSKKMDDAMELWESMRKEDLFPDSQTYTEVIRGFLRYGSPSDAMNIYE

Query:  DMKKSPDPPDELPFRILLKGLLPHPLLRNKVKQDFEELFPDQNVYDPPEEIFGLR
        DMKKSP+PPDELPFRILLKGLLPHPLLRN+VKQDFEELFPDQ+V+DPPEEIF LR
Subjt:  DMKKSPDPPDELPFRILLKGLLPHPLLRNKVKQDFEELFPDQNVYDPPEEIFGLR

XP_022158131.1 pentatricopeptide repeat-containing protein At3g46870 [Momordica charantia]4.63e-184100Show/hide
Query:  MAIRGFSRSKLPIFASVFLRGLTRRPIRDIPLPVKSKITGFQPDSSRPICGFRPYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFMKSHV
        MAIRGFSRSKLPIFASVFLRGLTRRPIRDIPLPVKSKITGFQPDSSRPICGFRPYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFMKSHV
Subjt:  MAIRGFSRSKLPIFASVFLRGLTRRPIRDIPLPVKSKITGFQPDSSRPICGFRPYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFMKSHV

Query:  SRLLKLDMISVLGELERQEEVALAVKIFRLIQKQDWYKPDVFMYKDLIIALAGSKKMDDAMELWESMRKEDLFPDSQTYTEVIRGFLRYGSPSDAMNIYE
        SRLLKLDMISVLGELERQEEVALAVKIFRLIQKQDWYKPDVFMYKDLIIALAGSKKMDDAMELWESMRKEDLFPDSQTYTEVIRGFLRYGSPSDAMNIYE
Subjt:  SRLLKLDMISVLGELERQEEVALAVKIFRLIQKQDWYKPDVFMYKDLIIALAGSKKMDDAMELWESMRKEDLFPDSQTYTEVIRGFLRYGSPSDAMNIYE

Query:  DMKKSPDPPDELPFRILLKGLLPHPLLRNKVKQDFEELFPDQNVYDPPEEIFGLR
        DMKKSPDPPDELPFRILLKGLLPHPLLRNKVKQDFEELFPDQNVYDPPEEIFGLR
Subjt:  DMKKSPDPPDELPFRILLKGLLPHPLLRNKVKQDFEELFPDQNVYDPPEEIFGLR

XP_022964699.1 protein THYLAKOID ASSEMBLY 8-like, chloroplastic [Cucurbita moschata]1.06e-16489.41Show/hide
Query:  MAIRGFSRSKLPIFASVFLRGLTRRPIRDIPLPVKSKITGFQPDSSRPICGFRPYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFMKSHV
        MA+R FS+ KLPI  SVFLRGL RRPIRDIPLPVKS + GFQPDSSRP+ GFR YHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFMK HV
Subjt:  MAIRGFSRSKLPIFASVFLRGLTRRPIRDIPLPVKSKITGFQPDSSRPICGFRPYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFMKSHV

Query:  SRLLKLDMISVLGELERQEEVALAVKIFRLIQKQDWYKPDVFMYKDLIIALAGSKKMDDAMELWESMRKEDLFPDSQTYTEVIRGFLRYGSPSDAMNIYE
         RLLKLDMI+VLGELERQEEVALAVK+FRLIQKQ+WYKPDVF+YKDLI+ALA SK+MDDAMELWESMRKE+LFPDSQTYTEVIRGFL+YGSPSDAMNIYE
Subjt:  SRLLKLDMISVLGELERQEEVALAVKIFRLIQKQDWYKPDVFMYKDLIIALAGSKKMDDAMELWESMRKEDLFPDSQTYTEVIRGFLRYGSPSDAMNIYE

Query:  DMKKSPDPPDELPFRILLKGLLPHPLLRNKVKQDFEELFPDQNVYDPPEEIFGLR
        DMKKSPDPPDELPFRILLKGLLPHPLLRN+VKQDFEE+FPDQ+VYDPPEEIFGLR
Subjt:  DMKKSPDPPDELPFRILLKGLLPHPLLRNKVKQDFEELFPDQNVYDPPEEIFGLR

XP_022970562.1 protein THYLAKOID ASSEMBLY 8-like, chloroplastic [Cucurbita maxima]3.04e-16490.2Show/hide
Query:  MAIRGFSRSKLPIFASVFLRGLTRRPIRDIPLPVKSKITGFQPDSSRPICGFRPYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFMKSHV
        MA+R FS+SKLPI  SVFLRGLTRRPIRDIPLPVKS I GF PDSSR + GFR YHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFMK HV
Subjt:  MAIRGFSRSKLPIFASVFLRGLTRRPIRDIPLPVKSKITGFQPDSSRPICGFRPYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFMKSHV

Query:  SRLLKLDMISVLGELERQEEVALAVKIFRLIQKQDWYKPDVFMYKDLIIALAGSKKMDDAMELWESMRKEDLFPDSQTYTEVIRGFLRYGSPSDAMNIYE
         RLLKLDMI+VLGELERQEEVALAVK+FRLIQKQ+W+KPDVF+YKDLI+ALA SKKMDDAMELWESMRKE+LFPDSQTYTEVIRGFL+YGSPSDAMNIYE
Subjt:  SRLLKLDMISVLGELERQEEVALAVKIFRLIQKQDWYKPDVFMYKDLIIALAGSKKMDDAMELWESMRKEDLFPDSQTYTEVIRGFLRYGSPSDAMNIYE

Query:  DMKKSPDPPDELPFRILLKGLLPHPLLRNKVKQDFEELFPDQNVYDPPEEIFGLR
        DMKKSPDPPDELPFRILLKGLLPHPLLRN+VKQDFEELFPDQ+VYDPPEEIFGLR
Subjt:  DMKKSPDPPDELPFRILLKGLLPHPLLRNKVKQDFEELFPDQNVYDPPEEIFGLR

XP_038895593.1 protein THYLAKOID ASSEMBLY 8-like, chloroplastic [Benincasa hispida]6.97e-17093.73Show/hide
Query:  MAIRGFSRSKLPIFASVFLRGLTRRPIRDIPLPVKSKITGFQPDSSRPICGFRPYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFMKSHV
        MAIR FSRSKLPIFASVFLRGLTRRPIRD  LPVKS ITGFQPDSSRP+ GFR YHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKL+KFMKSHV
Subjt:  MAIRGFSRSKLPIFASVFLRGLTRRPIRDIPLPVKSKITGFQPDSSRPICGFRPYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFMKSHV

Query:  SRLLKLDMISVLGELERQEEVALAVKIFRLIQKQDWYKPDVFMYKDLIIALAGSKKMDDAMELWESMRKEDLFPDSQTYTEVIRGFLRYGSPSDAMNIYE
         RLLKLDMISVLGELERQEEVALAVKIFRLIQKQDWYKPDVF+YKDLIIALA SKKMDDAM+LWESMR+E+LFPDSQTYTEVIRGFLRYGSPSDAMNIYE
Subjt:  SRLLKLDMISVLGELERQEEVALAVKIFRLIQKQDWYKPDVFMYKDLIIALAGSKKMDDAMELWESMRKEDLFPDSQTYTEVIRGFLRYGSPSDAMNIYE

Query:  DMKKSPDPPDELPFRILLKGLLPHPLLRNKVKQDFEELFPDQNVYDPPEEIFGLR
        DMKKSPDPPDELPFRILLKGLLPHPLLRN+VKQDFEELFPDQ+VYDPPEEIFGLR
Subjt:  DMKKSPDPPDELPFRILLKGLLPHPLLRNKVKQDFEELFPDQNVYDPPEEIFGLR

TrEMBL top hitse value%identityAlignment
A0A0A0LVE9 Uncharacterized protein7.62e-16790.2Show/hide
Query:  MAIRGFSRSKLPIFASVFLRGLTRRPIRDIPLPVKSKITGFQPDSSRPICGFRPYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFMKSHV
        MAIR FSRSKLP+FASVFL+GLTRRPIRD+PLPVKS IT FQPDS RPI GFR YHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEK +KFMKSHV
Subjt:  MAIRGFSRSKLPIFASVFLRGLTRRPIRDIPLPVKSKITGFQPDSSRPICGFRPYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFMKSHV

Query:  SRLLKLDMISVLGELERQEEVALAVKIFRLIQKQDWYKPDVFMYKDLIIALAGSKKMDDAMELWESMRKEDLFPDSQTYTEVIRGFLRYGSPSDAMNIYE
        SRLLKLDM++VLGELERQEEVALAVKIFRLI+KQDWYKPDV++YKDLIIALA SKKMDDAM+LWESMR+E+LFPDSQTYTEVIRGFLRYGSPSDAMN+YE
Subjt:  SRLLKLDMISVLGELERQEEVALAVKIFRLIQKQDWYKPDVFMYKDLIIALAGSKKMDDAMELWESMRKEDLFPDSQTYTEVIRGFLRYGSPSDAMNIYE

Query:  DMKKSPDPPDELPFRILLKGLLPHPLLRNKVKQDFEELFPDQNVYDPPEEIFGLR
        DMKKSPDPPDELPFRILLKGLLPHPLLRN+VKQDFEELFPDQ+V+DPPEEIF LR
Subjt:  DMKKSPDPPDELPFRILLKGLLPHPLLRNKVKQDFEELFPDQNVYDPPEEIFGLR

A0A1S3C5H5 pentatricopeptide repeat-containing protein At3g468707.62e-16790.98Show/hide
Query:  MAIRGFSRSKLPIFASVFLRGLTRRPIRDIPLPVKSKITGFQPDSSRPICGFRPYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFMKSHV
        MAIR FSRSKLPIFA VFLRGLTRRPIRD+PLPV S ITGFQPDSSRPI GFR YHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKL KFMKSHV
Subjt:  MAIRGFSRSKLPIFASVFLRGLTRRPIRDIPLPVKSKITGFQPDSSRPICGFRPYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFMKSHV

Query:  SRLLKLDMISVLGELERQEEVALAVKIFRLIQKQDWYKPDVFMYKDLIIALAGSKKMDDAMELWESMRKEDLFPDSQTYTEVIRGFLRYGSPSDAMNIYE
        SRLLKLDM++VLGELERQEEVALAVKIFRLI+KQDWYKPDV++YKDLIIALA SKKMDDAM+LWESMR+E+LFPDSQTYTEVIRGFLRYGSPSDAMN+YE
Subjt:  SRLLKLDMISVLGELERQEEVALAVKIFRLIQKQDWYKPDVFMYKDLIIALAGSKKMDDAMELWESMRKEDLFPDSQTYTEVIRGFLRYGSPSDAMNIYE

Query:  DMKKSPDPPDELPFRILLKGLLPHPLLRNKVKQDFEELFPDQNVYDPPEEIFGLR
        DMKKSP+PPDELPFRILLKGLLPHPLLRN+VKQDFEELFPDQ+V+DPPEEIF LR
Subjt:  DMKKSPDPPDELPFRILLKGLLPHPLLRNKVKQDFEELFPDQNVYDPPEEIFGLR

A0A5A7SRJ7 Pentatricopeptide repeat-containing protein7.62e-16790.98Show/hide
Query:  MAIRGFSRSKLPIFASVFLRGLTRRPIRDIPLPVKSKITGFQPDSSRPICGFRPYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFMKSHV
        MAIR FSRSKLPIFA VFLRGLTRRPIRD+PLPV S ITGFQPDSSRPI GFR YHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKL KFMKSHV
Subjt:  MAIRGFSRSKLPIFASVFLRGLTRRPIRDIPLPVKSKITGFQPDSSRPICGFRPYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFMKSHV

Query:  SRLLKLDMISVLGELERQEEVALAVKIFRLIQKQDWYKPDVFMYKDLIIALAGSKKMDDAMELWESMRKEDLFPDSQTYTEVIRGFLRYGSPSDAMNIYE
        SRLLKLDM++VLGELERQEEVALAVKIFRLI+KQDWYKPDV++YKDLIIALA SKKMDDAM+LWESMR+E+LFPDSQTYTEVIRGFLRYGSPSDAMN+YE
Subjt:  SRLLKLDMISVLGELERQEEVALAVKIFRLIQKQDWYKPDVFMYKDLIIALAGSKKMDDAMELWESMRKEDLFPDSQTYTEVIRGFLRYGSPSDAMNIYE

Query:  DMKKSPDPPDELPFRILLKGLLPHPLLRNKVKQDFEELFPDQNVYDPPEEIFGLR
        DMKKSP+PPDELPFRILLKGLLPHPLLRN+VKQDFEELFPDQ+V+DPPEEIF LR
Subjt:  DMKKSPDPPDELPFRILLKGLLPHPLLRNKVKQDFEELFPDQNVYDPPEEIFGLR

A0A6J1E045 pentatricopeptide repeat-containing protein At3g468702.24e-184100Show/hide
Query:  MAIRGFSRSKLPIFASVFLRGLTRRPIRDIPLPVKSKITGFQPDSSRPICGFRPYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFMKSHV
        MAIRGFSRSKLPIFASVFLRGLTRRPIRDIPLPVKSKITGFQPDSSRPICGFRPYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFMKSHV
Subjt:  MAIRGFSRSKLPIFASVFLRGLTRRPIRDIPLPVKSKITGFQPDSSRPICGFRPYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFMKSHV

Query:  SRLLKLDMISVLGELERQEEVALAVKIFRLIQKQDWYKPDVFMYKDLIIALAGSKKMDDAMELWESMRKEDLFPDSQTYTEVIRGFLRYGSPSDAMNIYE
        SRLLKLDMISVLGELERQEEVALAVKIFRLIQKQDWYKPDVFMYKDLIIALAGSKKMDDAMELWESMRKEDLFPDSQTYTEVIRGFLRYGSPSDAMNIYE
Subjt:  SRLLKLDMISVLGELERQEEVALAVKIFRLIQKQDWYKPDVFMYKDLIIALAGSKKMDDAMELWESMRKEDLFPDSQTYTEVIRGFLRYGSPSDAMNIYE

Query:  DMKKSPDPPDELPFRILLKGLLPHPLLRNKVKQDFEELFPDQNVYDPPEEIFGLR
        DMKKSPDPPDELPFRILLKGLLPHPLLRNKVKQDFEELFPDQNVYDPPEEIFGLR
Subjt:  DMKKSPDPPDELPFRILLKGLLPHPLLRNKVKQDFEELFPDQNVYDPPEEIFGLR

A0A6J1HLK1 protein THYLAKOID ASSEMBLY 8-like, chloroplastic5.14e-16589.41Show/hide
Query:  MAIRGFSRSKLPIFASVFLRGLTRRPIRDIPLPVKSKITGFQPDSSRPICGFRPYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFMKSHV
        MA+R FS+ KLPI  SVFLRGL RRPIRDIPLPVKS + GFQPDSSRP+ GFR YHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFMK HV
Subjt:  MAIRGFSRSKLPIFASVFLRGLTRRPIRDIPLPVKSKITGFQPDSSRPICGFRPYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFMKSHV

Query:  SRLLKLDMISVLGELERQEEVALAVKIFRLIQKQDWYKPDVFMYKDLIIALAGSKKMDDAMELWESMRKEDLFPDSQTYTEVIRGFLRYGSPSDAMNIYE
         RLLKLDMI+VLGELERQEEVALAVK+FRLIQKQ+WYKPDVF+YKDLI+ALA SK+MDDAMELWESMRKE+LFPDSQTYTEVIRGFL+YGSPSDAMNIYE
Subjt:  SRLLKLDMISVLGELERQEEVALAVKIFRLIQKQDWYKPDVFMYKDLIIALAGSKKMDDAMELWESMRKEDLFPDSQTYTEVIRGFLRYGSPSDAMNIYE

Query:  DMKKSPDPPDELPFRILLKGLLPHPLLRNKVKQDFEELFPDQNVYDPPEEIFGLR
        DMKKSPDPPDELPFRILLKGLLPHPLLRN+VKQDFEE+FPDQ+VYDPPEEIFGLR
Subjt:  DMKKSPDPPDELPFRILLKGLLPHPLLRNKVKQDFEELFPDQNVYDPPEEIFGLR

SwissProt top hitse value%identityAlignment
Q1PFH7 Pentatricopeptide repeat-containing protein At1g623502.1e-4746.96Show/hide
Query:  IGKEALFVIQGLKRFKEDEEKLQKFMKSHVSRLLKLDMISVLGELERQEEVALAVKIFRLIQKQDWYKPDVFMYKDLIIALAGSKKMDDAMELWESMRKE
        + KE L   + LKR +    +L +F+ SHVSRLLK D++SVL E +RQ +V L +K++ +++++ WY+PD+F Y+D+++ LA +KK+D+  ++WE ++KE
Subjt:  IGKEALFVIQGLKRFKEDEEKLQKFMKSHVSRLLKLDMISVLGELERQEEVALAVKIFRLIQKQDWYKPDVFMYKDLIIALAGSKKMDDAMELWESMRKE

Query:  DLFPDSQTYTEVIRGFLRYGSPSDAMNIYEDMKKSPDPPDELPFRILLKGLLPHPLLRNKVKQDFEELFPDQNVYDPPEEI
        ++  D  T+ +++RGFL    P +AM +Y +M++SPD P  LPFR++LKGL+P+P LR KVK DF ELFP   VYDPPE+I
Subjt:  DLFPDSQTYTEVIRGFLRYGSPSDAMNIYEDMKKSPDPPDELPFRILLKGLLPHPLLRNKVKQDFEELFPDQNVYDPPEEI

Q9C8T7 Pentatricopeptide repeat-containing protein At1g633301.2e-0732.65Show/hide
Query:  AVKIFRLIQKQDWYKPDVFMYKDLIIALAGSKKMDDAMELWESMRKEDLFPDSQTYTEVIRGFLRYGSPSDAMNIYEDMKKSPDPPDELPFRILLKGL
        A ++F  +  +D + PD+  Y  LI     SK+++D  EL+  M    L  D+ TYT +I+G    G   +A  +++ M     PPD + + ILL GL
Subjt:  AVKIFRLIQKQDWYKPDVFMYKDLIIALAGSKKMDDAMELWESMRKEDLFPDSQTYTEVIRGFLRYGSPSDAMNIYEDMKKSPDPPDELPFRILLKGL

Q9FKC3 Pentatricopeptide repeat-containing protein At5g48730, chloroplastic8.6e-0928.48Show/hide
Query:  RSRKAIGKEALFVIQGLKRFKEDEEKLQKFMKSHVSRLLKLDMISVLGELERQEEVALAVKIFRLIQKQDWYKPDVFMYKDLIIALAGSKKMDDAMELWE
        ++ K   ++A+ +I   +  K   EK     K    +LL   ++  L E         A+++F L+++Q WYKP+V +Y  LI+ L   K+ + A EL++
Subjt:  RSRKAIGKEALFVIQGLKRFKEDEEKLQKFMKSHVSRLLKLDMISVLGELERQEEVALAVKIFRLIQKQDWYKPDVFMYKDLIIALAGSKKMDDAMELWE

Query:  SMRKEDLFPDSQTYTEVIRGFLRYGSPSDAMNIYEDMKKSPD-PPDELPFRILLKGLL
         M  E    + + YT ++  + R G    A  + E MK S +  PD   + IL+K  L
Subjt:  SMRKEDLFPDSQTYTEVIRGFLRYGSPSDAMNIYEDMKKSPD-PPDELPFRILLKGLL

Q9FMQ1 Pentatricopeptide repeat-containing protein At5g12100, mitochondrial1.9e-0834.31Show/hide
Query:  EVALAVKIFRLIQKQDWYKPDVFMYKDLIIALAGSKKMDDAMELWESMRKEDLFPDSQTYTEVIRGFLRYGSPSDAMNIYEDMKKSPDPPDELPFRILLK
        +V   +++F  + K D   P VF+Y  LI  L   K+M+DA +L++ M    L P   TY  +I G+ + G+P  +  + E MK     P  + F  LLK
Subjt:  EVALAVKIFRLIQKQDWYKPDVFMYKDLIIALAGSKKMDDAMELWESMRKEDLFPDSQTYTEVIRGFLRYGSPSDAMNIYEDMKKSPDPPDELPFRILLK

Query:  GL
        GL
Subjt:  GL

Q9STF9 Protein THYLAKOID ASSEMBLY 8-like, chloroplastic2.9e-9769.69Show/hide
Query:  AIRGFSRSKLPIFASVFLRGLTRRP-IRDIPLPVKSKITGFQPDSSRPICGF-RPYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFMKSH
        AIR  SR K P FAS+F + +TR P I  I        T   P   +P   F   +HDGRPRGPLWR +K IGKEALFVI GLKR KED+EKL KF+K+H
Subjt:  AIRGFSRSKLPIFASVFLRGLTRRP-IRDIPLPVKSKITGFQPDSSRPICGF-RPYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFMKSH

Query:  VSRLLKLDMISVLGELERQEEVALAVKIFRLIQKQDWYKPDVFMYKDLIIALAGSKKMDDAMELWESMRKEDLFPDSQTYTEVIRGFLRYGSPSDAMNIY
        V RLLKLDM++V+GELERQEE ALA+K+F +IQKQ+WY+PDVFMYKDLI++LA SK+MD+AM LWE M+KE+LFPDSQTYTEVIRGFLR G P+DAMN+Y
Subjt:  VSRLLKLDMISVLGELERQEEVALAVKIFRLIQKQDWYKPDVFMYKDLIIALAGSKKMDDAMELWESMRKEDLFPDSQTYTEVIRGFLRYGSPSDAMNIY

Query:  EDMKKSPDPPDELPFRILLKGLLPHPLLRNKVKQDFEELFPDQNVYDPPEEIFG
        EDM KSPDPP+ELPFR+LLKGLLPHPLLRNKVK+DFEELFP+++ YDPPEEIFG
Subjt:  EDMKKSPDPPDELPFRILLKGLLPHPLLRNKVKQDFEELFPDQNVYDPPEEIFG

Arabidopsis top hitse value%identityAlignment
AT1G62350.1 Pentatricopeptide repeat (PPR) superfamily protein1.5e-4846.96Show/hide
Query:  IGKEALFVIQGLKRFKEDEEKLQKFMKSHVSRLLKLDMISVLGELERQEEVALAVKIFRLIQKQDWYKPDVFMYKDLIIALAGSKKMDDAMELWESMRKE
        + KE L   + LKR +    +L +F+ SHVSRLLK D++SVL E +RQ +V L +K++ +++++ WY+PD+F Y+D+++ LA +KK+D+  ++WE ++KE
Subjt:  IGKEALFVIQGLKRFKEDEEKLQKFMKSHVSRLLKLDMISVLGELERQEEVALAVKIFRLIQKQDWYKPDVFMYKDLIIALAGSKKMDDAMELWESMRKE

Query:  DLFPDSQTYTEVIRGFLRYGSPSDAMNIYEDMKKSPDPPDELPFRILLKGLLPHPLLRNKVKQDFEELFPDQNVYDPPEEI
        ++  D  T+ +++RGFL    P +AM +Y +M++SPD P  LPFR++LKGL+P+P LR KVK DF ELFP   VYDPPE+I
Subjt:  DLFPDSQTYTEVIRGFLRYGSPSDAMNIYEDMKKSPDPPDELPFRILLKGLLPHPLLRNKVKQDFEELFPDQNVYDPPEEI

AT3G46870.1 Pentatricopeptide repeat (PPR) superfamily protein2.1e-9869.69Show/hide
Query:  AIRGFSRSKLPIFASVFLRGLTRRP-IRDIPLPVKSKITGFQPDSSRPICGF-RPYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFMKSH
        AIR  SR K P FAS+F + +TR P I  I        T   P   +P   F   +HDGRPRGPLWR +K IGKEALFVI GLKR KED+EKL KF+K+H
Subjt:  AIRGFSRSKLPIFASVFLRGLTRRP-IRDIPLPVKSKITGFQPDSSRPICGF-RPYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFMKSH

Query:  VSRLLKLDMISVLGELERQEEVALAVKIFRLIQKQDWYKPDVFMYKDLIIALAGSKKMDDAMELWESMRKEDLFPDSQTYTEVIRGFLRYGSPSDAMNIY
        V RLLKLDM++V+GELERQEE ALA+K+F +IQKQ+WY+PDVFMYKDLI++LA SK+MD+AM LWE M+KE+LFPDSQTYTEVIRGFLR G P+DAMN+Y
Subjt:  VSRLLKLDMISVLGELERQEEVALAVKIFRLIQKQDWYKPDVFMYKDLIIALAGSKKMDDAMELWESMRKEDLFPDSQTYTEVIRGFLRYGSPSDAMNIY

Query:  EDMKKSPDPPDELPFRILLKGLLPHPLLRNKVKQDFEELFPDQNVYDPPEEIFG
        EDM KSPDPP+ELPFR+LLKGLLPHPLLRNKVK+DFEELFP+++ YDPPEEIFG
Subjt:  EDMKKSPDPPDELPFRILLKGLLPHPLLRNKVKQDFEELFPDQNVYDPPEEIFG

AT5G09320.1 Vacuolar sorting protein 9 (VPS9) domain2.6e-1632.77Show/hide
Query:  RGPLWRSRKAIGKEALFVIQGLKR---------------FKEDEEKLQKFMKSHVSRLLKLDMISVLGELERQEEVALAVKIFRLIQKQDWYKPDVFMYK
        R PL R R  +  EA+  +Q LKR                      L + + S   RLLK DM++VL EL RQ E +LA+K+F  I+K+ WYKP V MY 
Subjt:  RGPLWRSRKAIGKEALFVIQGLKR---------------FKEDEEKLQKFMKSHVSRLLKLDMISVLGELERQEEVALAVKIFRLIQKQDWYKPDVFMYK

Query:  DLIIALAGSKKMDDAMELWESMRKE-DLFPDSQTYTEVIRGFLRYGSPSDAMNIYEDMKKSPDPPDELPFRILLKGL
        D+I  +A +  M++   L+ +M+ E  L  + + +  ++   L +      M+ Y  M+     PD   FR+L+ GL
Subjt:  DLIIALAGSKKMDDAMELWESMRKE-DLFPDSQTYTEVIRGFLRYGSPSDAMNIYEDMKKSPDPPDELPFRILLKGL

AT5G12100.1 pentatricopeptide (PPR) repeat-containing protein1.4e-0934.31Show/hide
Query:  EVALAVKIFRLIQKQDWYKPDVFMYKDLIIALAGSKKMDDAMELWESMRKEDLFPDSQTYTEVIRGFLRYGSPSDAMNIYEDMKKSPDPPDELPFRILLK
        +V   +++F  + K D   P VF+Y  LI  L   K+M+DA +L++ M    L P   TY  +I G+ + G+P  +  + E MK     P  + F  LLK
Subjt:  EVALAVKIFRLIQKQDWYKPDVFMYKDLIIALAGSKKMDDAMELWESMRKEDLFPDSQTYTEVIRGFLRYGSPSDAMNIYEDMKKSPDPPDELPFRILLK

Query:  GL
        GL
Subjt:  GL

AT5G48730.1 Pentatricopeptide repeat (PPR) superfamily protein6.1e-1028.48Show/hide
Query:  RSRKAIGKEALFVIQGLKRFKEDEEKLQKFMKSHVSRLLKLDMISVLGELERQEEVALAVKIFRLIQKQDWYKPDVFMYKDLIIALAGSKKMDDAMELWE
        ++ K   ++A+ +I   +  K   EK     K    +LL   ++  L E         A+++F L+++Q WYKP+V +Y  LI+ L   K+ + A EL++
Subjt:  RSRKAIGKEALFVIQGLKRFKEDEEKLQKFMKSHVSRLLKLDMISVLGELERQEEVALAVKIFRLIQKQDWYKPDVFMYKDLIIALAGSKKMDDAMELWE

Query:  SMRKEDLFPDSQTYTEVIRGFLRYGSPSDAMNIYEDMKKSPD-PPDELPFRILLKGLL
         M  E    + + YT ++  + R G    A  + E MK S +  PD   + IL+K  L
Subjt:  SMRKEDLFPDSQTYTEVIRGFLRYGSPSDAMNIYEDMKKSPD-PPDELPFRILLKGLL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAATTCGGGGGTTTTCGAGGTCGAAACTACCAATTTTTGCTTCGGTATTCCTTCGAGGTCTAACGAGGAGACCCATAAGAGATATTCCATTACCAGTGAAATCGAA
GATTACCGGGTTTCAGCCGGATTCGAGCCGACCCATATGCGGATTCCGGCCTTATCACGACGGAAGGCCGCGGGGACCCCTTTGGAGAAGCCGGAAGGCAATTGGGAAAG
AAGCGCTTTTCGTTATTCAGGGATTGAAGAGATTCAAGGAAGACGAAGAGAAGCTCCAGAAGTTCATGAAGAGTCATGTTTCGAGGCTCCTGAAATTGGATATGATTTCT
GTGCTTGGTGAGCTTGAGCGGCAGGAAGAGGTTGCTTTAGCCGTCAAGATATTTAGGTTGATTCAAAAGCAAGACTGGTACAAGCCCGATGTCTTTATGTATAAAGACTT
GATCATCGCGTTAGCCGGAAGTAAAAAGATGGATGATGCAATGGAATTATGGGAGAGCATGAGGAAGGAGGATTTATTCCCCGACTCTCAAACGTATACCGAAGTCATCA
GAGGTTTCTTGAGGTATGGATCGCCTTCTGATGCAATGAACATATATGAGGATATGAAGAAGTCTCCAGATCCACCAGATGAGTTGCCATTCAGAATTTTGCTGAAGGGA
CTTCTGCCACACCCCCTTTTGAGAAATAAAGTAAAGCAAGATTTTGAGGAGCTCTTTCCTGACCAGAATGTCTACGATCCCCCAGAAGAGATTTTCGGCCTACGTTGA
mRNA sequenceShow/hide mRNA sequence
GAATGAGAAAAAAAGGAGACAAGAAATAGAAAGTGAGAAAGAAAAAAGAAACGCAGAGTTGGAAATAAAAATTCAACGAGAAATAGAAAGAAGGATAAAAAAAGAAATGA
AAAGGGCAAAAAGAGTACTTACCATCTTCAAAACTCATAATTGCTTCGATCGAAGGAGAATAAAAAAGAAGAGAATAGAGAACACAGAGACAAAACGGTAACTTTCCATT
CACCCGACCTCACAATTAGGTTACGAAAACTAATTTAAAGAAAAAATAGATTGTATTTCATTTAGCTCCACGTATTAAATTCACCCGCTAAAAAAGAAACAAGTTTAGGA
TTAAATTTAAAAATAAAATATAACCCAGCCGTCAAGTTTAGGATTTATCCAGCAGCCCAGCCCAGCCCAAACTTTGGTTTTGGCAGCCCCTTCTTGTTCCATCTGCAGGA
GCAGCACGACGGCAGCCTCTCCACTCCACCGTCGCCTCCCCACTCTCTCTTTTTACACGATTTTCCGACGCCGCCGCCGCCTCTCCCTCCCTCTCTTGGTATCATCCATT
CAACCTAATCAGTTTTCCAATGGCAATTCGGGGGTTTTCGAGGTCGAAACTACCAATTTTTGCTTCGGTATTCCTTCGAGGTCTAACGAGGAGACCCATAAGAGATATTC
CATTACCAGTGAAATCGAAGATTACCGGGTTTCAGCCGGATTCGAGCCGACCCATATGCGGATTCCGGCCTTATCACGACGGAAGGCCGCGGGGACCCCTTTGGAGAAGC
CGGAAGGCAATTGGGAAAGAAGCGCTTTTCGTTATTCAGGGATTGAAGAGATTCAAGGAAGACGAAGAGAAGCTCCAGAAGTTCATGAAGAGTCATGTTTCGAGGCTCCT
GAAATTGGATATGATTTCTGTGCTTGGTGAGCTTGAGCGGCAGGAAGAGGTTGCTTTAGCCGTCAAGATATTTAGGTTGATTCAAAAGCAAGACTGGTACAAGCCCGATG
TCTTTATGTATAAAGACTTGATCATCGCGTTAGCCGGAAGTAAAAAGATGGATGATGCAATGGAATTATGGGAGAGCATGAGGAAGGAGGATTTATTCCCCGACTCTCAA
ACGTATACCGAAGTCATCAGAGGTTTCTTGAGGTATGGATCGCCTTCTGATGCAATGAACATATATGAGGATATGAAGAAGTCTCCAGATCCACCAGATGAGTTGCCATT
CAGAATTTTGCTGAAGGGACTTCTGCCACACCCCCTTTTGAGAAATAAAGTAAAGCAAGATTTTGAGGAGCTCTTTCCTGACCAGAATGTCTACGATCCCCCAGAAGAGA
TTTTCGGCCTACGTTGAGGGAATTAACACATTCCTCAGTTTGTCGACGAACATTCCCCTCTGCTGAAAGCAAAACCAAGCAAGGGAAGATTGATGATATGAAAATGCAAG
GAGATGGAGAAGTTATTAATATGGTGTTCCTCGAAGCGGTCGACTCAGATTTGGATTCAAATGAAGGTGTTGTCTTTTAGGGAAGTGAGTGTACCTTTGCCCAGAAATGT
CTATTTTACCAATGAATATGAACACCACAGAGAGGTACAAATTGCCATTGATGTCTCCCTTAAGGGGGATTCTTCTTCTCCTTTTCTTAATATAGTTTTGTAACTTAATA
TCTTTGTTTAGAATTTCTTTTCTTAGCTTTTAAAATCTTAACTTTAATTTTTTTTTTCAGTTGCCTTAGCCAGTGAGCTATATTTTGATTGGTTTAATTTAAATGGTTCA
ATCTTCATGAATTTTAATTGTATATGACATATGTAGATAATGAATGGAGTTGTATTATATTTTTTTTATAAAG
Protein sequenceShow/hide protein sequence
MAIRGFSRSKLPIFASVFLRGLTRRPIRDIPLPVKSKITGFQPDSSRPICGFRPYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFMKSHVSRLLKLDMIS
VLGELERQEEVALAVKIFRLIQKQDWYKPDVFMYKDLIIALAGSKKMDDAMELWESMRKEDLFPDSQTYTEVIRGFLRYGSPSDAMNIYEDMKKSPDPPDELPFRILLKG
LLPHPLLRNKVKQDFEELFPDQNVYDPPEEIFGLR