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MC03g0150 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC03g0150
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description50S ribosomal protein L16, chloroplastic
Genome locationMC03:2648659..2648877
RNA-Seq ExpressionMC03g0150
SyntenyMC03g0150
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0019843 - rRNA binding (molecular function)
InterPro domainsIPR000114 - Ribosomal protein L16
IPR036920 - Ribosomal protein L10e/L16 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ABI97454.1 ribosomal protein L16, partial [Cucumis sativus]1.09e-1655.56Show/hide
Query:  TKLFKHHRGRRKVISYE--TISFAIYAIQALEPAWITSILIEAGQRTVIYK-------WIRIFSDKPVILKPIKTCMNSRK
        T+  KHHRGR K ISY   +I F  YAIQALEPAWITS  IEAG+R +          W+RIF DKPV L+P +T M S K
Subjt:  TKLFKHHRGRRKVISYE--TISFAIYAIQALEPAWITSILIEAGQRTVIYK-------WIRIFSDKPVILKPIKTCMNSRK
YP_004841821.1 ribosomal protein L16 [Cucumis melo subsp. melo]1.15e-1655.56Show/hide
Query:  TKLFKHHRGRRKVISYE--TISFAIYAIQALEPAWITSILIEAGQRTVIYK-------WIRIFSDKPVILKPIKTCMNSRK
        T+  KHHRGR K ISY   +I F  YAIQALEPAWITS  IEAG+R +          W+RIF DKPV L+P +T M S K
Subjt:  TKLFKHHRGRRKVISYE--TISFAIYAIQALEPAWITSILIEAGQRTVIYK-------WIRIFSDKPVILKPIKTCMNSRK
YP_009751522.1 ribosomal protein L16 [Thladiantha dubia]8.09e-1756.79Show/hide
Query:  TKLFKHHRGRRKVISYE--TISFAIYAIQALEPAWITSILIEAGQRTVIYK-------WIRIFSDKPVILKPIKTCMNSRK
        TK  KHHRGR K ISY    I F  YAIQALEPAWITS  IEAG+R +          W+RIF DKPV L+P +T M S K
Subjt:  TKLFKHHRGRRKVISYE--TISFAIYAIQALEPAWITSILIEAGQRTVIYK-------WIRIFSDKPVILKPIKTCMNSRK
YP_009752957.1 ribosomal protein L16 [Momordica sessilifolia]8.09e-1756.79Show/hide
Query:  TKLFKHHRGRRKVISYE--TISFAIYAIQALEPAWITSILIEAGQRTVIYK-------WIRIFSDKPVILKPIKTCMNSRK
        TK  KHHRGR K ISY    I F  YAIQALEPAWITS  IEAG+R +          W+RIF DKPV L+P +T M S K
Subjt:  TKLFKHHRGRRKVISYE--TISFAIYAIQALEPAWITSILIEAGQRTVIYK-------WIRIFSDKPVILKPIKTCMNSRK
YP_010048198.1 ribosomal protein L16 [Pilea pumila]5.71e-1755.56Show/hide
Query:  TKLFKHHRGRRKVISYE--TISFAIYAIQALEPAWITSILIEAGQRTVIYK-------WIRIFSDKPVILKPIKTCMNSRK
        T+  KHHRGR K ISY   TISF  YA+QALEPAWITS  IEAG+R +          W+RIF DKPV ++P +T M S K
Subjt:  TKLFKHHRGRRKVISYE--TISFAIYAIQALEPAWITSILIEAGQRTVIYK-------WIRIFSDKPVILKPIKTCMNSRK
TrEMBL top hitse value%identityAlignment
A0A1X9Q1F7 50S ribosomal protein L16, chloroplastic (Fragment)5.28e-1755.56Show/hide
Query:  TKLFKHHRGRRKVISYE--TISFAIYAIQALEPAWITSILIEAGQRTVIYK-------WIRIFSDKPVILKPIKTCMNSRK
        T+  KHHRGR K ISY   +I F  YAIQALEPAWITS  IEAG+R +          W+RIF DKPV L+P +T M S K
Subjt:  TKLFKHHRGRRKVISYE--TISFAIYAIQALEPAWITSILIEAGQRTVIYK-------WIRIFSDKPVILKPIKTCMNSRK
A0A218KG73 50S ribosomal protein L16, chloroplastic5.54e-1755.56Show/hide
Query:  TKLFKHHRGRRKVISYE--TISFAIYAIQALEPAWITSILIEAGQRTVIYK-------WIRIFSDKPVILKPIKTCMNSRK
        T+  KHHRGR K ISY   +I F  YAIQALEPAWITS  IEAG+R +          W+RIF DKPV L+P +T M S K
Subjt:  TKLFKHHRGRRKVISYE--TISFAIYAIQALEPAWITSILIEAGQRTVIYK-------WIRIFSDKPVILKPIKTCMNSRK
A0A6H0EPX9 50S ribosomal protein L16, chloroplastic3.91e-1756.79Show/hide
Query:  TKLFKHHRGRRKVISYE--TISFAIYAIQALEPAWITSILIEAGQRTVIYK-------WIRIFSDKPVILKPIKTCMNSRK
        TK  KHHRGR K ISY    I F  YAIQALEPAWITS  IEAG+R +          W+RIF DKPV L+P +T M S K
Subjt:  TKLFKHHRGRRKVISYE--TISFAIYAIQALEPAWITSILIEAGQRTVIYK-------WIRIFSDKPVILKPIKTCMNSRK
A0A6H0EWV6 50S ribosomal protein L16, chloroplastic3.91e-1756.79Show/hide
Query:  TKLFKHHRGRRKVISYE--TISFAIYAIQALEPAWITSILIEAGQRTVIYK-------WIRIFSDKPVILKPIKTCMNSRK
        TK  KHHRGR K ISY    I F  YAIQALEPAWITS  IEAG+R +          W+RIF DKPV L+P +T M S K
Subjt:  TKLFKHHRGRRKVISYE--TISFAIYAIQALEPAWITSILIEAGQRTVIYK-------WIRIFSDKPVILKPIKTCMNSRK
A0A7U3STB6 Ribosomal protein L162.76e-1755.56Show/hide
Query:  TKLFKHHRGRRKVISYE--TISFAIYAIQALEPAWITSILIEAGQRTVIYK-------WIRIFSDKPVILKPIKTCMNSRK
        T+  KHHRGR K ISY   TISF  YA+QALEPAWITS  IEAG+R +          W+RIF DKPV ++P +T M S K
Subjt:  TKLFKHHRGRRKVISYE--TISFAIYAIQALEPAWITSILIEAGQRTVIYK-------WIRIFSDKPVILKPIKTCMNSRK
SwissProt top hitse value%identityAlignment
B2LMN1 50S ribosomal protein L16, chloroplastic2.1e-1353.09Show/hide
Query:  TKLFKHHRGRRKVISY--ETISFAIYAIQALEPAWITSILIEAGQRTVIYK-------WIRIFSDKPVILKPIKTCMNSRK
        T+  K HRGR K ISY   TI F  YA+QALEPAWITS  IEAG+R +          W+RIF DKPV ++P +T M S K
Subjt:  TKLFKHHRGRRKVISY--ETISFAIYAIQALEPAWITSILIEAGQRTVIYK-------WIRIFSDKPVILKPIKTCMNSRK
Q1KXS1 50S ribosomal protein L16, chloroplastic2.1e-1353.09Show/hide
Query:  TKLFKHHRGRRKVISY--ETISFAIYAIQALEPAWITSILIEAGQRTVIYK-------WIRIFSDKPVILKPIKTCMNSRK
        T+  K HRGR K ISY   TI F  YA+QALEPAWITS  IEAG+R +          W+RIF DKPV ++P +T M S K
Subjt:  TKLFKHHRGRRKVISY--ETISFAIYAIQALEPAWITSILIEAGQRTVIYK-------WIRIFSDKPVILKPIKTCMNSRK
Q2MI63 50S ribosomal protein L16, chloroplastic1.2e-1354.32Show/hide
Query:  TKLFKHHRGRRKVISY--ETISFAIYAIQALEPAWITSILIEAGQRTVIYK-------WIRIFSDKPVILKPIKTCMNSRK
        T+  K HRGR K ISY    ISF  YA+QALEPAWITS  IEAG+R +          W+RIF DKPV L+P +T M S K
Subjt:  TKLFKHHRGRRKVISY--ETISFAIYAIQALEPAWITSILIEAGQRTVIYK-------WIRIFSDKPVILKPIKTCMNSRK
Q4VZN1 50S ribosomal protein L16, chloroplastic1.9e-1455.56Show/hide
Query:  TKLFKHHRGRRKVISY--ETISFAIYAIQALEPAWITSILIEAGQRTVIYK-------WIRIFSDKPVILKPIKTCMNSRK
        T+  KHHRGR K ISY   +I F  YAIQALEPAWITS  IEAG+R +          W+RIF DKPV L+P +T M S K
Subjt:  TKLFKHHRGRRKVISY--ETISFAIYAIQALEPAWITSILIEAGQRTVIYK-------WIRIFSDKPVILKPIKTCMNSRK
Q8S8V6 50S ribosomal protein L16, chloroplastic1.6e-1354.32Show/hide
Query:  TKLFKHHRGRRKVISY--ETISFAIYAIQALEPAWITSILIEAGQRTVIYK-------WIRIFSDKPVILKPIKTCMNSRK
        T+  K HRGR K ISY    ISF  YA+QALEPAWITS  IEAG+R +          W+RIF DKPV L+P +T M S K
Subjt:  TKLFKHHRGRRKVISY--ETISFAIYAIQALEPAWITSILIEAGQRTVIYK-------WIRIFSDKPVILKPIKTCMNSRK
Arabidopsis top hitse value%identityAlignment
AT2G28830.1 PLANT U-BOX 121.1e-0945Show/hide
Query:  TKLFKHHRGR-RKVISYETISFAIYAIQALEPAWITSILIEAGQRTV-------IYKWIRIFSDKPVILKPIKTCMNSRK
        TK  KHHRGR  K +S +    + YA+Q LEPAWITS  IEAG+R +       +   + IF+DKPV ++P +T M   K
Subjt:  TKLFKHHRGR-RKVISYETISFAIYAIQALEPAWITSILIEAGQRTV-------IYKWIRIFSDKPVILKPIKTCMNSRK
ATCG00790.1 ribosomal protein L163.1e-1249.38Show/hide
Query:  TKLFKHHRGRRKVISY--ETISFAIYAIQALEPAWITSILIEAGQRTVIYK-------WIRIFSDKPVILKPIKTCMNSRK
        T+  K HRGR K IS     I F  YA+Q LEPAWITS  IEAG+R +          W+RIF DKPV ++P +T M S K
Subjt:  TKLFKHHRGRRKVISY--ETISFAIYAIQALEPAWITSILIEAGQRTVIYK-------WIRIFSDKPVILKPIKTCMNSRK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ACTAAACTTTTTAAACATCATAGAGGAAGAAGGAAAGTAATATCTTATGAGACAATTTCCTTTGCTATATACGCTATTCAAGCACTTGAACCAGCTTGGATCACATCTAT
ACTAATCGAAGCGGGACAAAGGACAGTAATATATAAATGGATACGTATATTTTCAGACAAACCCGTTATATTAAAACCTATAAAAACATGCATGAACTCAAGGAAA
mRNA sequenceShow/hide mRNA sequence
ACTAAACTTTTTAAACATCATAGAGGAAGAAGGAAAGTAATATCTTATGAGACAATTTCCTTTGCTATATACGCTATTCAAGCACTTGAACCAGCTTGGATCACATCTAT
ACTAATCGAAGCGGGACAAAGGACAGTAATATATAAATGGATACGTATATTTTCAGACAAACCCGTTATATTAAAACCTATAAAAACATGCATGAACTCAAGGAAA
Protein sequenceShow/hide protein sequence
TKLFKHHRGRRKVISYETISFAIYAIQALEPAWITSILIEAGQRTVIYKWIRIFSDKPVILKPIKTCMNSRK