CuGenDBv2

Gene ID	MC03g0169
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Rab5-interacting family protein
Genome location	MC03:3110691..3112218
RNA-Seq Expression	MC03g0169
Synteny	MC03g0169
Gene Ontology terms	GO:0006996 - organelle organization (biological process) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR010742 - Rab5-interacting protein IPR029008 - Rab5-interacting protein family

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004145291.1 uncharacterized protein RAB5IF homolog [Cucumis sativus]

9.72e-73

85.04

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Query:  MKDGSSINLNPQFHHQNGHLPPF-FAKLFDPDASWDKDQLGDVLHWMRQSVALVCGLLWGSIPLIGGIWFILFLVILTTMVYGYYAIILKVDEEEFGGHG
        MKDG S+ +N Q   QNGHLPPF  AKLFDP+ SWDKDQLGDVLHWMRQSVALVCGLLWGSIPL+GG+WFILFLVI TTM+YGYYA+ILKVDEEEFGGHG
Subjt:  MKDGSSINLNPQFHHQNGHLPPF-FAKLFDPDASWDKDQLGDVLHWMRQSVALVCGLLWGSIPLIGGIWFILFLVILTTMVYGYYAIILKVDEEEFGGHG

Query:  LLLQEGLFASITLFLLMWTLVYSLGHF
        +LLQEGLFASITLFLLMWTL+YSLGHF
Subjt:  LLLQEGLFASITLFLLMWTLVYSLGHF

XP_008457469.1 PREDICTED: uncharacterized protein C20orf24 homolog [Cucumis melo]

7.36e-75

84.25

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Query:  MKDGSSINLNPQFHHQNGHLPPF-FAKLFDPDASWDKDQLGDVLHWMRQSVALVCGLLWGSIPLIGGIWFILFLVILTTMVYGYYAIILKVDEEEFGGHG
        MKDG ++ +N Q  HQNGHLPPF  A+LFDP+ SWDKDQLGDVLHWMRQSVALVCGLLWGSIPL+GGIWFILFLVI TTM+YGYYA+ILKVDEEEFGGHG
Subjt:  MKDGSSINLNPQFHHQNGHLPPF-FAKLFDPDASWDKDQLGDVLHWMRQSVALVCGLLWGSIPLIGGIWFILFLVILTTMVYGYYAIILKVDEEEFGGHG

Query:  LLLQEGLFASITLFLLMWTLVYSLGHF
        +LLQEGLFAS+TLFLLMWTL+YSLGHF
Subjt:  LLLQEGLFASITLFLLMWTLVYSLGHF

XP_022948613.1 uncharacterized protein C20orf24 homolog [Cucurbita moschata]

2.20e-76

88.19

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Query:  MKDGSSINLNPQFHHQNGHLPPF-FAKLFDPDASWDKDQLGDVLHWMRQSVALVCGLLWGSIPLIGGIWFILFLVILTTMVYGYYAIILKVDEEEFGGHG
        MKDG SI +N Q  HQNGHLPPF  A LFDP+ASWDKDQLGDVLHWMRQSVALVCGLLWGS+PL+GGIWFILFLVI TTMVYGYYA+ILKVDEEEFGGHG
Subjt:  MKDGSSINLNPQFHHQNGHLPPF-FAKLFDPDASWDKDQLGDVLHWMRQSVALVCGLLWGSIPLIGGIWFILFLVILTTMVYGYYAIILKVDEEEFGGHG

Query:  LLLQEGLFASITLFLLMWTLVYSLGHF
        +LLQEGLFASITLFLLMWTLVYSLGHF
Subjt:  LLLQEGLFASITLFLLMWTLVYSLGHF

XP_022998338.1 uncharacterized protein C20orf24 homolog [Cucurbita maxima]

6.30e-76

87.4

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Query:  MKDGSSINLNPQFHHQNGHLPPF-FAKLFDPDASWDKDQLGDVLHWMRQSVALVCGLLWGSIPLIGGIWFILFLVILTTMVYGYYAIILKVDEEEFGGHG
        MKDG SI +N Q  HQNGHLPPF  A LFDP+ASWDKDQLGDVLHWMRQSVALVCGLLWGS+PL+GGIWFI+FLVI TTMVYGYYA+ILKVDEEEFGGHG
Subjt:  MKDGSSINLNPQFHHQNGHLPPF-FAKLFDPDASWDKDQLGDVLHWMRQSVALVCGLLWGSIPLIGGIWFILFLVILTTMVYGYYAIILKVDEEEFGGHG

Query:  LLLQEGLFASITLFLLMWTLVYSLGHF
        +LLQEGLFASITLFLLMWTLVYSLGHF
Subjt:  LLLQEGLFASITLFLLMWTLVYSLGHF

XP_038895585.1 respirasome Complex Assembly Factor 1-like isoform X2 [Benincasa hispida]

8.95e-76

87.4

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Query:  MKDGSSINLNPQFHHQNGHLPPF-FAKLFDPDASWDKDQLGDVLHWMRQSVALVCGLLWGSIPLIGGIWFILFLVILTTMVYGYYAIILKVDEEEFGGHG
        MKDG S  +N Q  HQNGHLPPF  AKLFDP+ SWDKDQLGDVLHWMRQSVALVCGLLWGSIPL+GGIWFILFLVI TTMVYGYYA+ILKVDEEEFGGHG
Subjt:  MKDGSSINLNPQFHHQNGHLPPF-FAKLFDPDASWDKDQLGDVLHWMRQSVALVCGLLWGSIPLIGGIWFILFLVILTTMVYGYYAIILKVDEEEFGGHG

Query:  LLLQEGLFASITLFLLMWTLVYSLGHF
        +LLQEGLFASITLFLLMWTL+YSLGHF
Subjt:  LLLQEGLFASITLFLLMWTLVYSLGHF

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LY22 Uncharacterized protein

4.70e-73

85.04

Show/hide

Query:  MKDGSSINLNPQFHHQNGHLPPF-FAKLFDPDASWDKDQLGDVLHWMRQSVALVCGLLWGSIPLIGGIWFILFLVILTTMVYGYYAIILKVDEEEFGGHG
        MKDG S+ +N Q   QNGHLPPF  AKLFDP+ SWDKDQLGDVLHWMRQSVALVCGLLWGSIPL+GG+WFILFLVI TTM+YGYYA+ILKVDEEEFGGHG
Subjt:  MKDGSSINLNPQFHHQNGHLPPF-FAKLFDPDASWDKDQLGDVLHWMRQSVALVCGLLWGSIPLIGGIWFILFLVILTTMVYGYYAIILKVDEEEFGGHG

Query:  LLLQEGLFASITLFLLMWTLVYSLGHF
        +LLQEGLFASITLFLLMWTL+YSLGHF
Subjt:  LLLQEGLFASITLFLLMWTLVYSLGHF

A0A1S3C692 uncharacterized protein C20orf24 homolog

3.56e-75

84.25

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Query:  MKDGSSINLNPQFHHQNGHLPPF-FAKLFDPDASWDKDQLGDVLHWMRQSVALVCGLLWGSIPLIGGIWFILFLVILTTMVYGYYAIILKVDEEEFGGHG
        MKDG ++ +N Q  HQNGHLPPF  A+LFDP+ SWDKDQLGDVLHWMRQSVALVCGLLWGSIPL+GGIWFILFLVI TTM+YGYYA+ILKVDEEEFGGHG
Subjt:  MKDGSSINLNPQFHHQNGHLPPF-FAKLFDPDASWDKDQLGDVLHWMRQSVALVCGLLWGSIPLIGGIWFILFLVILTTMVYGYYAIILKVDEEEFGGHG

Query:  LLLQEGLFASITLFLLMWTLVYSLGHF
        +LLQEGLFAS+TLFLLMWTL+YSLGHF
Subjt:  LLLQEGLFASITLFLLMWTLVYSLGHF

A0A445E461 Uncharacterized protein

3.02e-67

78.74

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Query:  MKDGSSINLNPQFHHQNGHLPPF-FAKLFDPDASWDKDQLGDVLHWMRQSVALVCGLLWGSIPLIGGIWFILFLVILTTMVYGYYAIILKVDEEEFGGHG
        MK+G S  LN Q  HQNGHL P  FAKLFDP+ASWDKDQLGDVLHW+RQ + LVCGL+WG+IPL+GGIWFILFLV+ T+ +YGYYAIILKVDEEEFGGHG
Subjt:  MKDGSSINLNPQFHHQNGHLPPF-FAKLFDPDASWDKDQLGDVLHWMRQSVALVCGLLWGSIPLIGGIWFILFLVILTTMVYGYYAIILKVDEEEFGGHG

Query:  LLLQEGLFASITLFLLMWTLVYSLGHF
         LLQEGLFAS TLFLL WTLVYSL HF
Subjt:  LLLQEGLFASITLFLLMWTLVYSLGHF

A0A6J1G9S8 uncharacterized protein C20orf24 homolog

1.06e-76

88.19

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Query:  MKDGSSINLNPQFHHQNGHLPPF-FAKLFDPDASWDKDQLGDVLHWMRQSVALVCGLLWGSIPLIGGIWFILFLVILTTMVYGYYAIILKVDEEEFGGHG
        MKDG SI +N Q  HQNGHLPPF  A LFDP+ASWDKDQLGDVLHWMRQSVALVCGLLWGS+PL+GGIWFILFLVI TTMVYGYYA+ILKVDEEEFGGHG
Subjt:  MKDGSSINLNPQFHHQNGHLPPF-FAKLFDPDASWDKDQLGDVLHWMRQSVALVCGLLWGSIPLIGGIWFILFLVILTTMVYGYYAIILKVDEEEFGGHG

Query:  LLLQEGLFASITLFLLMWTLVYSLGHF
        +LLQEGLFASITLFLLMWTLVYSLGHF
Subjt:  LLLQEGLFASITLFLLMWTLVYSLGHF

A0A6J1KGG2 uncharacterized protein C20orf24 homolog

3.05e-76

87.4

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Query:  MKDGSSINLNPQFHHQNGHLPPF-FAKLFDPDASWDKDQLGDVLHWMRQSVALVCGLLWGSIPLIGGIWFILFLVILTTMVYGYYAIILKVDEEEFGGHG
        MKDG SI +N Q  HQNGHLPPF  A LFDP+ASWDKDQLGDVLHWMRQSVALVCGLLWGS+PL+GGIWFI+FLVI TTMVYGYYA+ILKVDEEEFGGHG
Subjt:  MKDGSSINLNPQFHHQNGHLPPF-FAKLFDPDASWDKDQLGDVLHWMRQSVALVCGLLWGSIPLIGGIWFILFLVILTTMVYGYYAIILKVDEEEFGGHG

Query:  LLLQEGLFASITLFLLMWTLVYSLGHF
        +LLQEGLFASITLFLLMWTLVYSLGHF
Subjt:  LLLQEGLFASITLFLLMWTLVYSLGHF

SwissProt top hits

e value

%identity

Alignment

Q9BUV8 Respirasome Complex Assembly Factor 1

1.3e-13

37.61

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Query:  PQFHHQNGHLP-PFFAKLFDPDASW-DKDQLGDVLHWMRQSVALVCGLLWGSIPLIGGIWFILFLVILTTMVYGYYAIILKVDEEEFGGHGLLLQEGLFA
        PQ    NG L    ++K+   DA+W DKD+  DV++W RQ +A+V G++WG +PL G +    F +I   ++Y Y++  L++DEEE+GG   L +EG   
Subjt:  PQFHHQNGHLP-PFFAKLFDPDASW-DKDQLGDVLHWMRQSVALVCGLLWGSIPLIGGIWFILFLVILTTMVYGYYAIILKVDEEEFGGHGLLLQEGLFA

Query:  SITLFLLMWTLVYSLGH
        S  LF++     ++ GH
Subjt:  SITLFLLMWTLVYSLGH

Q9CQT9 Respirasome Complex Assembly Factor 1

4.7e-16

38.98

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Query:  PQFHHQNGHLP-PFFAKLFDPDASW-DKDQLGDVLHWMRQSVALVCGLLWGSIPLIGGIWFILFLVILTTMVYGYYAIILKVDEEEFGGHGLLLQEGLFA
        PQ    NG L    ++K+   DA+W DKD+  DV++W RQ +ALV G++WG +PL G +    F +I   ++Y Y++  L++DEEE+GG   L +EG   
Subjt:  PQFHHQNGHLP-PFFAKLFDPDASW-DKDQLGDVLHWMRQSVALVCGLLWGSIPLIGGIWFILFLVILTTMVYGYYAIILKVDEEEFGGHGLLLQEGLFA

Query:  SITLFLLMWTLVYSLGHF
        S  LF+++W + Y+  H+
Subjt:  SITLFLLMWTLVYSLGHF

Arabidopsis top hits

e value

%identity

Alignment

AT2G29020.1 Rab5-interacting family protein

4.9e-45

66.67

Show/hide

Query:  KDGSSINLNPQFHHQNGHLPPF-FAKLFDPDASWDKDQLGDVLHWMRQSVALVCGLLWGSIPLIGGIWFILFLVILTTMVYGYYAIILKVDEEEFGGHGL
        K  S    + Q +HQN HL  F FAKLFD +ASWDKDQLGDVLHW+RQ V L+CGLLWG+IPL+GGIW +LFL I + +VYGYYA++LK+DEE+FGGH  
Subjt:  KDGSSINLNPQFHHQNGHLPPF-FAKLFDPDASWDKDQLGDVLHWMRQSVALVCGLLWGSIPLIGGIWFILFLVILTTMVYGYYAIILKVDEEEFGGHGL

Query:  LLQEGLFASITLFLLMWTLVYSLGHF
        LLQ+GLFAS++LFLL W LVYSL  F
Subjt:  LLQEGLFASITLFLLMWTLVYSLGHF

AT5G59410.1 Rab5-interacting family protein

8.1e-48

72.31

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Query:  MKDGSSINLN---PQFHHQNGHLPPF-FAKLFDPDASWDKDQLGDVLHWMRQSVALVCGLLWGSIPLIGGIWFILFLVILTTMVYGYYAIILKVDEEEFG
        MK+  S  LN    Q +HQN HL P   AKLFDPDASWDKDQLGDVLHW+RQ V L+ GLLWGSIPL+GGIW ILFL I + +VYGYYA+ILKVDEE+FG
Subjt:  MKDGSSINLN---PQFHHQNGHLPPF-FAKLFDPDASWDKDQLGDVLHWMRQSVALVCGLLWGSIPLIGGIWFILFLVILTTMVYGYYAIILKVDEEEFG

Query:  GHGLLLQEGLFASITLFLLMWTLVYSLGHF
        GH  LLQEGLFAS+TLFLL W LVYSL HF
Subjt:  GHGLLLQEGLFASITLFLLMWTLVYSLGHF

Sequences

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CDS sequence

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ATGAAAGACGGGAGCTCGATAAACCTTAATCCTCAATTCCACCACCAGAACGGTCACTTGCCGCCCTTTTTCGCCAAATTGTTCGATCCAGACGCTTCCTGGGATAAGGA
TCAACTAGGAGATGTCTTGCATTGGATGCGCCAATCGGTTGCGCTTGTATGTGGGCTGCTATGGGGTTCCATACCTCTAATTGGCGGCATATGGTTCATCTTATTCTTGG
TGATATTGACCACGATGGTATACGGATACTACGCAATTATTTTGAAAGTCGACGAAGAAGAATTCGGGGGTCACGGACTTCTCCTTCAGGAAGGGCTTTTTGCTTCCATA
ACTCTGTTTCTGCTCATGTGGACTCTAGTTTACAGCTTGGGACATTTC

mRNA sequence

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Protein sequence

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MKDGSSINLNPQFHHQNGHLPPFFAKLFDPDASWDKDQLGDVLHWMRQSVALVCGLLWGSIPLIGGIWFILFLVILTTMVYGYYAIILKVDEEEFGGHGLLLQEGLFASI
TLFLLMWTLVYSLGHF

MC03g0169 (gene) of Bitter gourd (Dali-11) v1 genome