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MC03g0185 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC03g0185
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionRING-type E3 ubiquitin transferase
Genome locationMC03:3520765..3520926
RNA-Seq ExpressionMC03g0185
SyntenyMC03g0185
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022155478.1 RING-H2 finger protein ATL1-like [Momordica charantia]4.56e-1561.54Show/hide
Query:  GEECAICLCVYEEGERKWVKMSKCGHIFHRRCIKGWLKVGRRCPLCRSSVSV
        GEEC ICL  +++GE+ W+ MSKC H+FHR CI  WLK  R CPLCRS V V
Subjt:  GEECAICLCVYEEGERKWVKMSKCGHIFHRRCIKGWLKVGRRCPLCRSSVSV

XP_022158250.1 E3 ubiquitin-protein ligase RING1-like [Momordica charantia]2.11e-1464.71Show/hide
Query:  EECAICLCVYEEGERKWVKMSKCGHIFHRRCIKGWLKVGRRCPLCRSSVSV
        +ECAICL  +EEGE K  KMS+CGHIFHR CI  WL+V R CPLCR  V +
Subjt:  EECAICLCVYEEGERKWVKMSKCGHIFHRRCIKGWLKVGRRCPLCRSSVSV

XP_022158252.1 E3 ubiquitin-protein ligase RHA2B-like [Momordica charantia]3.01e-1975Show/hide
Query:  GGEECAICLCVYEEGERKWVKMSKCGHIFHRRCIKGWLKVGRRCPLCRSSVS
        GG EC ICLC YEEGE KW+KM KCGHIFHR CI+ WL VGR CPLCRS +S
Subjt:  GGEECAICLCVYEEGERKWVKMSKCGHIFHRRCIKGWLKVGRRCPLCRSSVS

XP_022998666.1 RING-H2 finger protein ATL56-like [Cucurbita maxima]7.56e-1668.63Show/hide
Query:  EECAICLCVYEEGERKWVKMSKCGHIFHRRCIKGWLKVGRRCPLCRSSVSV
        +ECAICL  +E+G+ K  KM+KCGHIFHRRCI  WLKV R CPLCRS V V
Subjt:  EECAICLCVYEEGERKWVKMSKCGHIFHRRCIKGWLKVGRRCPLCRSSVSV

XP_023524567.1 RING-H2 finger protein ATL56-like [Cucurbita pepo subsp. pepo]6.07e-1566.67Show/hide
Query:  EECAICLCVYEEGERKWVKMSKCGHIFHRRCIKGWLKVGRRCPLCRSSVSV
        +ECAICL  +E+ + K  KM+KCGHIFHRRCI  WLKV R CPLCRS V V
Subjt:  EECAICLCVYEEGERKWVKMSKCGHIFHRRCIKGWLKVGRRCPLCRSSVSV

TrEMBL top hitse value%identityAlignment
A0A6J1DN25 RING-H2 finger protein ATL1-like2.21e-1561.54Show/hide
Query:  GEECAICLCVYEEGERKWVKMSKCGHIFHRRCIKGWLKVGRRCPLCRSSVSV
        GEEC ICL  +++GE+ W+ MSKC H+FHR CI  WLK  R CPLCRS V V
Subjt:  GEECAICLCVYEEGERKWVKMSKCGHIFHRRCIKGWLKVGRRCPLCRSSVSV

A0A6J1DVB5 RING-type E3 ubiquitin transferase1.02e-1464.71Show/hide
Query:  EECAICLCVYEEGERKWVKMSKCGHIFHRRCIKGWLKVGRRCPLCRSSVSV
        +ECAICL  +EEGE K  KMS+CGHIFHR CI  WL+V R CPLCR  V +
Subjt:  EECAICLCVYEEGERKWVKMSKCGHIFHRRCIKGWLKVGRRCPLCRSSVSV

A0A6J1DWR6 E3 ubiquitin-protein ligase RHA2B-like1.46e-1975Show/hide
Query:  GGEECAICLCVYEEGERKWVKMSKCGHIFHRRCIKGWLKVGRRCPLCRSSVS
        GG EC ICLC YEEGE KW+KM KCGHIFHR CI+ WL VGR CPLCRS +S
Subjt:  GGEECAICLCVYEEGERKWVKMSKCGHIFHRRCIKGWLKVGRRCPLCRSSVS

A0A6J1E0E9 RING-H2 finger protein ATL1-like1.11e-1462.75Show/hide
Query:  EECAICLCVYEEGERKWVKMSKCGHIFHRRCIKGWLKVGRRCPLCRSSVSV
        EECAICL  +E+GE K  KMSKC H+FHR CI  WLK  R CPLCR+S+ +
Subjt:  EECAICLCVYEEGERKWVKMSKCGHIFHRRCIKGWLKVGRRCPLCRSSVSV

A0A6J1KAT3 RING-type E3 ubiquitin transferase3.66e-1668.63Show/hide
Query:  EECAICLCVYEEGERKWVKMSKCGHIFHRRCIKGWLKVGRRCPLCRSSVSV
        +ECAICL  +E+G+ K  KM+KCGHIFHRRCI  WLKV R CPLCRS V V
Subjt:  EECAICLCVYEEGERKWVKMSKCGHIFHRRCIKGWLKVGRRCPLCRSSVSV

SwissProt top hitse value%identityAlignment
O64763 E3 ubiquitin-protein ligase ATL91.0e-0745.1Show/hide
Query:  GGEECAICLCVYEEGERKWVKMSKCGHIFHRRCIKGWLKVGRRCPLCRSSV
        GG ECA+CLC +E+ E   + M  C H+FH  C+  WL     CPLCR+ +
Subjt:  GGEECAICLCVYEEGERKWVKMSKCGHIFHRRCIKGWLKVGRRCPLCRSSV

O80927 RING-H2 finger protein ATL331.3e-0744.23Show/hide
Query:  GEECAICLCVYEEGERKWVKMSKCGHIFHRRCIKGWLKVGRRCPLCRSSVSV
        G EC++CL V+ + + +  ++S+C H FH  CI+ WLK    CP+CR+ VSV
Subjt:  GEECAICLCVYEEGERKWVKMSKCGHIFHRRCIKGWLKVGRRCPLCRSSVSV

Q9M0C3 RING-H2 finger protein ATL145.9e-0840Show/hide
Query:  GGEECAICLCVYEEGERKWV-KMSKCGHIFHRRCIKGWLKVGRRCPLCRSSVSVF
        GG++C +C+  + +G+  W  K+ +CGH+FHR+C+  WL     CP+CR  V  F
Subjt:  GGEECAICLCVYEEGERKWV-KMSKCGHIFHRRCIKGWLKVGRRCPLCRSSVSVF

Q9M0R4 Putative RING-H2 finger protein ATL379.1e-0948.15Show/hide
Query:  GGEECAICLCVYEEGE-RKWVKMSKCGHIFHRRCIKGWLKVGRRCPLCRSSVSV
        GG ECAICLC +E+ E  +W  M  C H FH  CI  WL     CP+CR+++S+
Subjt:  GGEECAICLCVYEEGE-RKWVKMSKCGHIFHRRCIKGWLKVGRRCPLCRSSVSV

Q9ZT50 E3 ubiquitin-protein ligase RHA2A3.4e-0844.23Show/hide
Query:  GGEECAICLCVYEEGERKWVKMSKCGHIFHRRCIKGWL-KVGRRCPLCRSSV
        GG +C +CL   +EGE   V+  +C H+FH++C++GWL +    CPLCRS++
Subjt:  GGEECAICLCVYEEGERKWVKMSKCGHIFHRRCIKGWL-KVGRRCPLCRSSV

Arabidopsis top hitse value%identityAlignment
AT1G15100.1 RING-H2 finger A2A2.4e-0944.23Show/hide
Query:  GGEECAICLCVYEEGERKWVKMSKCGHIFHRRCIKGWL-KVGRRCPLCRSSV
        GG +C +CL   +EGE   V+  +C H+FH++C++GWL +    CPLCRS++
Subjt:  GGEECAICLCVYEEGERKWVKMSKCGHIFHRRCIKGWL-KVGRRCPLCRSSV

AT2G35000.1 RING/U-box superfamily protein7.1e-0945.1Show/hide
Query:  GGEECAICLCVYEEGERKWVKMSKCGHIFHRRCIKGWLKVGRRCPLCRSSV
        GG ECA+CLC +E+ E   + M  C H+FH  C+  WL     CPLCR+ +
Subjt:  GGEECAICLCVYEEGERKWVKMSKCGHIFHRRCIKGWLKVGRRCPLCRSSV

AT2G37580.1 RING/U-box superfamily protein9.3e-0944.23Show/hide
Query:  GEECAICLCVYEEGERKWVKMSKCGHIFHRRCIKGWLKVGRRCPLCRSSVSV
        G EC++CL V+ + + +  ++S+C H FH  CI+ WLK    CP+CR+ VSV
Subjt:  GEECAICLCVYEEGERKWVKMSKCGHIFHRRCIKGWLKVGRRCPLCRSSVSV

AT4G09130.1 RING/U-box superfamily protein6.4e-1048.15Show/hide
Query:  GGEECAICLCVYEEGE-RKWVKMSKCGHIFHRRCIKGWLKVGRRCPLCRSSVSV
        GG ECAICLC +E+ E  +W  M  C H FH  CI  WL     CP+CR+++S+
Subjt:  GGEECAICLCVYEEGE-RKWVKMSKCGHIFHRRCIKGWLKVGRRCPLCRSSVSV

AT4G30370.1 RING/U-box superfamily protein4.2e-0940Show/hide
Query:  GGEECAICLCVYEEGERKWV-KMSKCGHIFHRRCIKGWLKVGRRCPLCRSSVSVF
        GG++C +C+  + +G+  W  K+ +CGH+FHR+C+  WL     CP+CR  V  F
Subjt:  GGEECAICLCVYEEGERKWV-KMSKCGHIFHRRCIKGWLKVGRRCPLCRSSVSVF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGCGGCGAAGAATGTGCGATTTGCTTGTGCGTATATGAAGAAGGGGAGAGGAAGTGGGTGAAGATGAGTAAATGCGGCCATATATTTCACCGCCGATGTATCAAGGGGTG
GCTGAAGGTCGGCCGCCGCTGCCCGCTTTGCCGGAGCTCTGTTTCCGTCTTC
mRNA sequenceShow/hide mRNA sequence
GGCGGCGAAGAATGTGCGATTTGCTTGTGCGTATATGAAGAAGGGGAGAGGAAGTGGGTGAAGATGAGTAAATGCGGCCATATATTTCACCGCCGATGTATCAAGGGGTG
GCTGAAGGTCGGCCGCCGCTGCCCGCTTTGCCGGAGCTCTGTTTCCGTCTTC
Protein sequenceShow/hide protein sequence
GGEECAICLCVYEEGERKWVKMSKCGHIFHRRCIKGWLKVGRRCPLCRSSVSVF