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MC03g0188 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC03g0188
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionRING-type E3 ubiquitin transferase
Genome locationMC03:3538311..3538451
RNA-Seq ExpressionMC03g0188
SyntenyMC03g0188
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7036928.1 RING-H2 finger protein ATL52, partial [Cucurbita argyrosperma subsp. argyrosperma]2.11e-2280.43Show/hide
Query:  DDECAICLGEFEEGEKCRKMSECGHIFHRNCIDRWLRVERHCPLCR
        DDECAICL EFE+ +KCRKM+ CGHIFHR CIDRWL+V+RHCPLCR
Subjt:  DDECAICLGEFEEGEKCRKMSECGHIFHRNCIDRWLRVERHCPLCR

XP_022158250.1 E3 ubiquitin-protein ligase RING1-like [Momordica charantia]2.90e-30100Show/hide
Query:  DDDECAICLGEFEEGEKCRKMSECGHIFHRNCIDRWLRVERHCPLCR
        DDDECAICLGEFEEGEKCRKMSECGHIFHRNCIDRWLRVERHCPLCR
Subjt:  DDDECAICLGEFEEGEKCRKMSECGHIFHRNCIDRWLRVERHCPLCR

XP_022158251.1 RING-H2 finger protein ATL1-like [Momordica charantia]5.32e-2478.72Show/hide
Query:  DDDECAICLGEFEEGEKCRKMSECGHIFHRNCIDRWLRVERHCPLCR
        DD+ECAICL +FE+GEKCRKMS+C H+FHR+CIDRWL+ ERHCPLCR
Subjt:  DDDECAICLGEFEEGEKCRKMSECGHIFHRNCIDRWLRVERHCPLCR

XP_022998666.1 RING-H2 finger protein ATL56-like [Cucurbita maxima]9.32e-2582.61Show/hide
Query:  DDECAICLGEFEEGEKCRKMSECGHIFHRNCIDRWLRVERHCPLCR
        DDECAICL EFE+G+KCRKM++CGHIFHR CIDRWL+V+RHCPLCR
Subjt:  DDECAICLGEFEEGEKCRKMSECGHIFHRNCIDRWLRVERHCPLCR

XP_023524567.1 RING-H2 finger protein ATL56-like [Cucurbita pepo subsp. pepo]7.58e-2480.43Show/hide
Query:  DDECAICLGEFEEGEKCRKMSECGHIFHRNCIDRWLRVERHCPLCR
        DDECAICL EFE+ +KCRKM++CGHIFHR CIDRWL+V+RHCPLCR
Subjt:  DDECAICLGEFEEGEKCRKMSECGHIFHRNCIDRWLRVERHCPLCR

TrEMBL top hitse value%identityAlignment
A0A5A7U2S7 RING-type E3 ubiquitin transferase1.04e-2174.47Show/hide
Query:  DDDECAICLGEFEEGEKCRKMSECGHIFHRNCIDRWLRVERHCPLCR
        D+ ECAICL E EEGEKCRKM  CGH+FH++CIDRW  VE HCPLCR
Subjt:  DDDECAICLGEFEEGEKCRKMSECGHIFHRNCIDRWLRVERHCPLCR

A0A5D3BFU3 RING-type E3 ubiquitin transferase1.40e-2174.47Show/hide
Query:  DDDECAICLGEFEEGEKCRKMSECGHIFHRNCIDRWLRVERHCPLCR
        D+ ECAICL E EEGEKCRKM  CGH+FH++CIDRW  VE HCPLCR
Subjt:  DDDECAICLGEFEEGEKCRKMSECGHIFHRNCIDRWLRVERHCPLCR

A0A6J1DVB5 RING-type E3 ubiquitin transferase1.40e-30100Show/hide
Query:  DDDECAICLGEFEEGEKCRKMSECGHIFHRNCIDRWLRVERHCPLCR
        DDDECAICLGEFEEGEKCRKMSECGHIFHRNCIDRWLRVERHCPLCR
Subjt:  DDDECAICLGEFEEGEKCRKMSECGHIFHRNCIDRWLRVERHCPLCR

A0A6J1E0E9 RING-H2 finger protein ATL1-like2.58e-2478.72Show/hide
Query:  DDDECAICLGEFEEGEKCRKMSECGHIFHRNCIDRWLRVERHCPLCR
        DD+ECAICL +FE+GEKCRKMS+C H+FHR+CIDRWL+ ERHCPLCR
Subjt:  DDDECAICLGEFEEGEKCRKMSECGHIFHRNCIDRWLRVERHCPLCR

A0A6J1KAT3 RING-type E3 ubiquitin transferase4.51e-2582.61Show/hide
Query:  DDECAICLGEFEEGEKCRKMSECGHIFHRNCIDRWLRVERHCPLCR
        DDECAICL EFE+G+KCRKM++CGHIFHR CIDRWL+V+RHCPLCR
Subjt:  DDECAICLGEFEEGEKCRKMSECGHIFHRNCIDRWLRVERHCPLCR

SwissProt top hitse value%identityAlignment
Q7XLY8 E3 ubiquitin-protein ligase Os04g05909001.1e-1052.27Show/hide
Query:  ECAICLGEFEEGEKCRKMSECGHIFHRNCIDRWLRVERHCPLCR
        +C++CLGEF +GE  R +  C H FH+ CID WL+   +CPLCR
Subjt:  ECAICLGEFEEGEKCRKMSECGHIFHRNCIDRWLRVERHCPLCR

Q9LX93 E3 ubiquitin-protein ligase RING13.8e-1155.32Show/hide
Query:  DDDECAICLGEFEEGEKCRKMSECGHIFHRNCIDRWLRVERHCPLCR
        D  EC++CL EFEE E  R + +C H FH NCID WL   ++CPLCR
Subjt:  DDDECAICLGEFEEGEKCRKMSECGHIFHRNCIDRWLRVERHCPLCR

Q9LZJ6 RING-H2 finger protein ATL51.1e-1053.33Show/hide
Query:  DECAICLGEFEEGEKCRKMSECGHIFHRNCIDRWLRVERHCPLCR
        +EC++CL EFEE ++ R + +CGH+FH +CID W R    CPLCR
Subjt:  DECAICLGEFEEGEKCRKMSECGHIFHRNCIDRWLRVERHCPLCR

Q9M0C3 RING-H2 finger protein ATL141.4e-1048.89Show/hide
Query:  DECAICLGEFEEGEKCRKMSECGHIFHRNCIDRWLRVERHCPLCR
        D+C +C+  F +G+ CRK+  CGH+FHR C+D WL     CP+CR
Subjt:  DECAICLGEFEEGEKCRKMSECGHIFHRNCIDRWLRVERHCPLCR

Q9SRM0 RING-H2 finger protein ATL667.6e-1255.32Show/hide
Query:  DDDECAICLGEFEEGEKCRKMSECGHIFHRNCIDRWLRVERHCPLCR
        ++ EC ICLG FEEGEK + +  C H +H  C+DRWL+ E  CPLCR
Subjt:  DDDECAICLGEFEEGEKCRKMSECGHIFHRNCIDRWLRVERHCPLCR

Arabidopsis top hitse value%identityAlignment
AT3G11110.1 RING/U-box superfamily protein5.4e-1355.32Show/hide
Query:  DDDECAICLGEFEEGEKCRKMSECGHIFHRNCIDRWLRVERHCPLCR
        ++ EC ICLG FEEGEK + +  C H +H  C+DRWL+ E  CPLCR
Subjt:  DDDECAICLGEFEEGEKCRKMSECGHIFHRNCIDRWLRVERHCPLCR

AT3G20395.1 RING/U-box superfamily protein6.0e-1258.14Show/hide
Query:  CAICLGEFEEGEKCRKMSECGHIFHRNCIDRWLRVERHCPLCR
        C+ICL ++EEGE  RK++ CGH FH NCID WL  +  CP+CR
Subjt:  CAICLGEFEEGEKCRKMSECGHIFHRNCIDRWLRVERHCPLCR

AT3G62690.1 AtL57.8e-1253.33Show/hide
Query:  DECAICLGEFEEGEKCRKMSECGHIFHRNCIDRWLRVERHCPLCR
        +EC++CL EFEE ++ R + +CGH+FH +CID W R    CPLCR
Subjt:  DECAICLGEFEEGEKCRKMSECGHIFHRNCIDRWLRVERHCPLCR

AT4G30370.1 RING/U-box superfamily protein1.0e-1148.89Show/hide
Query:  DECAICLGEFEEGEKCRKMSECGHIFHRNCIDRWLRVERHCPLCR
        D+C +C+  F +G+ CRK+  CGH+FHR C+D WL     CP+CR
Subjt:  DECAICLGEFEEGEKCRKMSECGHIFHRNCIDRWLRVERHCPLCR

AT5G10380.1 RING/U-box superfamily protein2.7e-1255.32Show/hide
Query:  DDDECAICLGEFEEGEKCRKMSECGHIFHRNCIDRWLRVERHCPLCR
        D  EC++CL EFEE E  R + +C H FH NCID WL   ++CPLCR
Subjt:  DDDECAICLGEFEEGEKCRKMSECGHIFHRNCIDRWLRVERHCPLCR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GATGACGACGAATGTGCGATTTGCCTGGGCGAGTTTGAAGAAGGGGAGAAGTGCCGGAAGATGAGTGAGTGCGGCCACATATTTCACCGGAACTGCATTGACCGGTGGCT
GAGGGTGGAGCGCCACTGCCCACTTTGCCGG
mRNA sequenceShow/hide mRNA sequence
GATGACGACGAATGTGCGATTTGCCTGGGCGAGTTTGAAGAAGGGGAGAAGTGCCGGAAGATGAGTGAGTGCGGCCACATATTTCACCGGAACTGCATTGACCGGTGGCT
GAGGGTGGAGCGCCACTGCCCACTTTGCCGG
Protein sequenceShow/hide protein sequence
DDDECAICLGEFEEGEKCRKMSECGHIFHRNCIDRWLRVERHCPLCR