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MC03g0192 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC03g0192
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionRING-type E3 ubiquitin transferase
Genome locationMC03:3577542..3577742
RNA-Seq ExpressionMC03g0192
SyntenyMC03g0192
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0016020 - membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004151031.2 RING-H2 finger protein ATL39 [Cucumis sativus]5.64e-2055.88Show/hide
Query:  LFEYGKGGKD-GKNADCIFCLEEFKKGELCRMLVNCKHVFHANCIDKGTVKNDYCPICRSSILARVIY
        LF+YG GG   GKNADC  CL+EF +GE+CRML  CKHVFH  CID+       CP+CRS +  R++Y
Subjt:  LFEYGKGGKD-GKNADCIFCLEEFKKGELCRMLVNCKHVFHANCIDKGTVKNDYCPICRSSILARVIY

XP_022964750.1 RING-H2 finger protein ATL39-like [Cucurbita moschata]1.52e-2055.22Show/hide
Query:  LFEYGKGGKDGKNADCIFCLEEFKKGELCRMLVNCKHVFHANCIDKGTVKNDYCPICRSSILARVIY
        LF+YG+ G  GKNADC  CL+EF +GE+CRML  CKHVFH  CID+      +CP+CRS +  R I+
Subjt:  LFEYGKGGKDGKNADCIFCLEEFKKGELCRMLVNCKHVFHANCIDKGTVKNDYCPICRSSILARVIY

XP_022970579.1 RING-H2 finger protein ATL14-like [Cucurbita maxima]2.95e-2155.22Show/hide
Query:  LFEYGKGGKDGKNADCIFCLEEFKKGELCRMLVNCKHVFHANCIDKGTVKNDYCPICRSSILARVIY
        LF+YG+ G +GKNADC  CL+EF +GE+CRML  CKHVFH  CID+      +CP+CRS +  R I+
Subjt:  LFEYGKGGKDGKNADCIFCLEEFKKGELCRMLVNCKHVFHANCIDKGTVKNDYCPICRSSILARVIY

XP_023520573.1 RING-H2 finger protein ATL51-like [Cucurbita pepo subsp. pepo]1.68e-2055.22Show/hide
Query:  LFEYGKGGKDGKNADCIFCLEEFKKGELCRMLVNCKHVFHANCIDKGTVKNDYCPICRSSILARVIY
        LF+YG+ G  GKNADC  CL+EF +GE+CRML  CKHVFH  CID+      +CP+CRS +  R I+
Subjt:  LFEYGKGGKDGKNADCIFCLEEFKKGELCRMLVNCKHVFHANCIDKGTVKNDYCPICRSSILARVIY

XP_038895799.1 E3 ubiquitin-protein ligase RING1-like [Benincasa hispida]5.85e-2356.72Show/hide
Query:  LFEYGKGGKDGKNADCIFCLEEFKKGELCRMLVNCKHVFHANCIDKGTVKNDYCPICRSSILARVIY
        LF+YG+GG  GKNADC  CL+EF +GE+CRML  CKHVFH  CID+      +CP+CRS +  R++Y
Subjt:  LFEYGKGGKDGKNADCIFCLEEFKKGELCRMLVNCKHVFHANCIDKGTVKNDYCPICRSSILARVIY

TrEMBL top hitse value%identityAlignment
A0A0A0M0H1 RING-type E3 ubiquitin transferase2.73e-2055.88Show/hide
Query:  LFEYGKGGKD-GKNADCIFCLEEFKKGELCRMLVNCKHVFHANCIDKGTVKNDYCPICRSSILARVIY
        LF+YG GG   GKNADC  CL+EF +GE+CRML  CKHVFH  CID+       CP+CRS +  R++Y
Subjt:  LFEYGKGGKD-GKNADCIFCLEEFKKGELCRMLVNCKHVFHANCIDKGTVKNDYCPICRSSILARVIY

A0A5A7VKM2 RING-H2 finger protein ATL39-like3.86e-2055.88Show/hide
Query:  LFEYGKGGKD-GKNADCIFCLEEFKKGELCRMLVNCKHVFHANCIDKGTVKNDYCPICRSSILARVIY
        LF+YG GG   GKNADC  CL+EF +GE+CRML  CKHVFH  CID+       CP+CRS +  R++Y
Subjt:  LFEYGKGGKD-GKNADCIFCLEEFKKGELCRMLVNCKHVFHANCIDKGTVKNDYCPICRSSILARVIY

A0A5D3BEF0 RING-H2 finger protein ATL39-like3.86e-2055.88Show/hide
Query:  LFEYGKGGKD-GKNADCIFCLEEFKKGELCRMLVNCKHVFHANCIDKGTVKNDYCPICRSSILARVIY
        LF+YG GG   GKNADC  CL+EF +GE+CRML  CKHVFH  CID+       CP+CRS +  R++Y
Subjt:  LFEYGKGGKD-GKNADCIFCLEEFKKGELCRMLVNCKHVFHANCIDKGTVKNDYCPICRSSILARVIY

A0A6J1HLQ2 RING-type E3 ubiquitin transferase7.36e-2155.22Show/hide
Query:  LFEYGKGGKDGKNADCIFCLEEFKKGELCRMLVNCKHVFHANCIDKGTVKNDYCPICRSSILARVIY
        LF+YG+ G  GKNADC  CL+EF +GE+CRML  CKHVFH  CID+      +CP+CRS +  R I+
Subjt:  LFEYGKGGKDGKNADCIFCLEEFKKGELCRMLVNCKHVFHANCIDKGTVKNDYCPICRSSILARVIY

A0A6J1I603 RING-type E3 ubiquitin transferase1.43e-2155.22Show/hide
Query:  LFEYGKGGKDGKNADCIFCLEEFKKGELCRMLVNCKHVFHANCIDKGTVKNDYCPICRSSILARVIY
        LF+YG+ G +GKNADC  CL+EF +GE+CRML  CKHVFH  CID+      +CP+CRS +  R I+
Subjt:  LFEYGKGGKDGKNADCIFCLEEFKKGELCRMLVNCKHVFHANCIDKGTVKNDYCPICRSSILARVIY

SwissProt top hitse value%identityAlignment
P87237 Uncharacterized RING finger protein C4G3.12c3.3e-0841.67Show/hide
Query:  LFEYGKGGKDGKNADCIFCLEEFKKGELCRMLVNCKHVFHANCIDKG-TVKNDYCPICRS
        LF Y           C+ CLE +  G++CR L  CKH FH  CID+  T  N+ CP+CR+
Subjt:  LFEYGKGGKDGKNADCIFCLEEFKKGELCRMLVNCKHVFHANCIDKG-TVKNDYCPICRS

Q8GW38 RING-H2 finger protein ATL472.5e-0839.68Show/hide
Query:  LFEYGKGGKDGKNADCIFCLEEFKKGELCRMLVNCKHVFHANCIDKGTVKNDYCPICRSSILA
        L++  KG K+    DC  CL EF + +  R+L NC H FH +CID   + N  CP+CR ++ +
Subjt:  LFEYGKGGKDGKNADCIFCLEEFKKGELCRMLVNCKHVFHANCIDKGTVKNDYCPICRSSILA

Q9M0C3 RING-H2 finger protein ATL141.7e-0938.33Show/hide
Query:  FEYGKGGKDGKNADCIFCLEEFKKGELCRMLVNCKHVFHANCIDKGTVKNDYCPICRSSI
        F+Y +   +    DC+ C++ F++G+ CR L  C HVFH  C+D   +K   CPICR  +
Subjt:  FEYGKGGKDGKNADCIFCLEEFKKGELCRMLVNCKHVFHANCIDKGTVKNDYCPICRSSI

Q9SG96 RING-H2 finger protein ATL721.7e-0944.07Show/hide
Query:  YGKGGKDGKNADCIFCLEEFKKGELCRMLVNCKHVFHANCIDKGTVKNDYCPICRSSIL
        YG G  D K  +C+ CL +F+ GE  R+L  C H FH  CID   +    CP CR S+L
Subjt:  YGKGGKDGKNADCIFCLEEFKKGELCRMLVNCKHVFHANCIDKGTVKNDYCPICRSSIL

Q9SJJ7 RING-H2 finger protein ATL572.3e-0938.71Show/hide
Query:  LFEYGKGGKDGKNADCIFCLEEFKKGELCRMLVNCKHVFHANCIDKGTVKNDYCPICRSSIL
        ++ Y K  K  +N DC+ CL +F++GE  +++ +C HVFH +C+D        CP+CRS+ L
Subjt:  LFEYGKGGKDGKNADCIFCLEEFKKGELCRMLVNCKHVFHANCIDKGTVKNDYCPICRSSIL

Arabidopsis top hitse value%identityAlignment
AT1G23980.1 RING/U-box superfamily protein1.8e-0939.68Show/hide
Query:  LFEYGKGGKDGKNADCIFCLEEFKKGELCRMLVNCKHVFHANCIDKGTVKNDYCPICRSSILA
        L++  KG K+    DC  CL EF + +  R+L NC H FH +CID   + N  CP+CR ++ +
Subjt:  LFEYGKGGKDGKNADCIFCLEEFKKGELCRMLVNCKHVFHANCIDKGTVKNDYCPICRSSILA

AT2G27940.1 RING/U-box superfamily protein1.6e-1038.71Show/hide
Query:  LFEYGKGGKDGKNADCIFCLEEFKKGELCRMLVNCKHVFHANCIDKGTVKNDYCPICRSSIL
        ++ Y K  K  +N DC+ CL +F++GE  +++ +C HVFH +C+D        CP+CRS+ L
Subjt:  LFEYGKGGKDGKNADCIFCLEEFKKGELCRMLVNCKHVFHANCIDKGTVKNDYCPICRSSIL

AT2G28920.1 RING/U-box superfamily protein3.2e-1152.63Show/hide
Query:  GKGGK-DGKNAD-CIFCLEEFKKGELCRMLVNCKHVFHANCIDKGTVKNDYCPICRS
        G GG  DG  AD C+ CLE+FK  ++ R+LV CKHVFH +CID        CPICR+
Subjt:  GKGGK-DGKNAD-CIFCLEEFKKGELCRMLVNCKHVFHANCIDKGTVKNDYCPICRS

AT3G10910.1 RING/U-box superfamily protein1.2e-1044.07Show/hide
Query:  YGKGGKDGKNADCIFCLEEFKKGELCRMLVNCKHVFHANCIDKGTVKNDYCPICRSSIL
        YG G  D K  +C+ CL +F+ GE  R+L  C H FH  CID   +    CP CR S+L
Subjt:  YGKGGKDGKNADCIFCLEEFKKGELCRMLVNCKHVFHANCIDKGTVKNDYCPICRSSIL

AT4G30370.1 RING/U-box superfamily protein1.2e-1038.33Show/hide
Query:  FEYGKGGKDGKNADCIFCLEEFKKGELCRMLVNCKHVFHANCIDKGTVKNDYCPICRSSI
        F+Y +   +    DC+ C++ F++G+ CR L  C HVFH  C+D   +K   CPICR  +
Subjt:  FEYGKGGKDGKNADCIFCLEEFKKGELCRMLVNCKHVFHANCIDKGTVKNDYCPICRSSI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTTTTTGAATATGGAAAAGGCGGAAAGGACGGGAAAAACGCGGATTGCATCTTCTGCTTGGAGGAGTTCAAGAAAGGTGAGTTGTGCCGCATGCTCGTGAATTGCAAACA
CGTTTTTCATGCAAATTGCATCGACAAGGGGACTGTCAAAAATGATTATTGCCCTATTTGTCGTTCCTCTATTCTTGCTCGTGTCATTTAC
mRNA sequenceShow/hide mRNA sequence
CTTTTTGAATATGGAAAAGGCGGAAAGGACGGGAAAAACGCGGATTGCATCTTCTGCTTGGAGGAGTTCAAGAAAGGTGAGTTGTGCCGCATGCTCGTGAATTGCAAACA
CGTTTTTCATGCAAATTGCATCGACAAGGGGACTGTCAAAAATGATTATTGCCCTATTTGTCGTTCCTCTATTCTTGCTCGTGTCATTTAC
Protein sequenceShow/hide protein sequence
LFEYGKGGKDGKNADCIFCLEEFKKGELCRMLVNCKHVFHANCIDKGTVKNDYCPICRSSILARVIY