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MC03g0194 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC03g0194
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionRING-H2 finger protein ATL1-like
Genome locationMC03:3649975..3650121
RNA-Seq ExpressionMC03g0194
SyntenyMC03g0194
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR044675 - E3 ubiquitin-protein ligase RING1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022155478.1 RING-H2 finger protein ATL1-like [Momordica charantia]2.33e-2991.67Show/hide
Query:  EECAICLNEFKKGEKCWIMSKCCHMFHRNCVDRWLKAERHCPLCRSCV
        EEC ICL EFKKGEKCWIMSKCCH+FHRNC+DRWLKAERHCPLCRSCV
Subjt:  EECAICLNEFKKGEKCWIMSKCCHMFHRNCVDRWLKAERHCPLCRSCV

XP_022158250.1 E3 ubiquitin-protein ligase RING1-like [Momordica charantia]3.93e-2172.92Show/hide
Query:  EECAICLNEFKKGEKCWIMSKCCHMFHRNCVDRWLKAERHCPLCRSCV
        +ECAICL EF++GEKC  MS+C H+FHRNC+DRWL+ ERHCPLCR CV
Subjt:  EECAICLNEFKKGEKCWIMSKCCHMFHRNCVDRWLKAERHCPLCRSCV

XP_022158251.1 RING-H2 finger protein ATL1-like [Momordica charantia]1.75e-2072.92Show/hide
Query:  EECAICLNEFKKGEKCWIMSKCCHMFHRNCVDRWLKAERHCPLCRSCV
        EECAICL++F++GEKC  MSKC H+FHR+C+DRWLKAERHCPLCR+ +
Subjt:  EECAICLNEFKKGEKCWIMSKCCHMFHRNCVDRWLKAERHCPLCRSCV

XP_022998666.1 RING-H2 finger protein ATL56-like [Cucurbita maxima]1.78e-2070.83Show/hide
Query:  EECAICLNEFKKGEKCWIMSKCCHMFHRNCVDRWLKAERHCPLCRSCV
        +ECAICL+EF+ G+KC  M+KC H+FHR C+DRWLK +RHCPLCRSCV
Subjt:  EECAICLNEFKKGEKCWIMSKCCHMFHRNCVDRWLKAERHCPLCRSCV

XP_023524567.1 RING-H2 finger protein ATL56-like [Cucurbita pepo subsp. pepo]1.44e-1968.75Show/hide
Query:  EECAICLNEFKKGEKCWIMSKCCHMFHRNCVDRWLKAERHCPLCRSCV
        +ECAICL+EF+  +KC  M+KC H+FHR C+DRWLK +RHCPLCRSCV
Subjt:  EECAICLNEFKKGEKCWIMSKCCHMFHRNCVDRWLKAERHCPLCRSCV

TrEMBL top hitse value%identityAlignment
A0A5D3BGV5 RING-H2 finger protein ATL66-like9.24e-1865.96Show/hide
Query:  ECAICLNEFKKGEKCWIMSKCCHMFHRNCVDRWLKAERHCPLCRSCV
        EC ICLN+F+  +KC  M KC H+FHR+C+DRWLK ER CPLCR+CV
Subjt:  ECAICLNEFKKGEKCWIMSKCCHMFHRNCVDRWLKAERHCPLCRSCV

A0A6J1DN25 RING-H2 finger protein ATL1-like1.13e-2991.67Show/hide
Query:  EECAICLNEFKKGEKCWIMSKCCHMFHRNCVDRWLKAERHCPLCRSCV
        EEC ICL EFKKGEKCWIMSKCCH+FHRNC+DRWLKAERHCPLCRSCV
Subjt:  EECAICLNEFKKGEKCWIMSKCCHMFHRNCVDRWLKAERHCPLCRSCV

A0A6J1DVB5 RING-type E3 ubiquitin transferase1.90e-2172.92Show/hide
Query:  EECAICLNEFKKGEKCWIMSKCCHMFHRNCVDRWLKAERHCPLCRSCV
        +ECAICL EF++GEKC  MS+C H+FHRNC+DRWL+ ERHCPLCR CV
Subjt:  EECAICLNEFKKGEKCWIMSKCCHMFHRNCVDRWLKAERHCPLCRSCV

A0A6J1E0E9 RING-H2 finger protein ATL1-like8.46e-2172.92Show/hide
Query:  EECAICLNEFKKGEKCWIMSKCCHMFHRNCVDRWLKAERHCPLCRSCV
        EECAICL++F++GEKC  MSKC H+FHR+C+DRWLKAERHCPLCR+ +
Subjt:  EECAICLNEFKKGEKCWIMSKCCHMFHRNCVDRWLKAERHCPLCRSCV

A0A6J1KAT3 RING-type E3 ubiquitin transferase8.63e-2170.83Show/hide
Query:  EECAICLNEFKKGEKCWIMSKCCHMFHRNCVDRWLKAERHCPLCRSCV
        +ECAICL+EF+ G+KC  M+KC H+FHR C+DRWLK +RHCPLCRSCV
Subjt:  EECAICLNEFKKGEKCWIMSKCCHMFHRNCVDRWLKAERHCPLCRSCV

SwissProt top hitse value%identityAlignment
P93823 RING-H2 finger protein ATL14.7e-1253.06Show/hide
Query:  EECAICLNEFKKGEKCWIMSKCCHMFHRNCVDRWLKAERHCPLCRSCVS
        +EC++CLNEF++ EK  I+  CCH+FH +C+D WL+   +CPLCR+ VS
Subjt:  EECAICLNEFKKGEKCWIMSKCCHMFHRNCVDRWLKAERHCPLCRSCVS

Q84W40 RING-H2 finger protein ATL111.5e-1051.11Show/hide
Query:  ECAICLNEFKKGEKCWIMSKCCHMFHRNCVDRWLKAERHCPLCRS
        EC++CLNEF+  E   ++ KCCH+FH  C+D WL++   CPLCR+
Subjt:  ECAICLNEFKKGEKCWIMSKCCHMFHRNCVDRWLKAERHCPLCRS

Q9LX93 E3 ubiquitin-protein ligase RING11.5e-1051.06Show/hide
Query:  ECAICLNEFKKGEKCWIMSKCCHMFHRNCVDRWLKAERHCPLCRSCV
        EC++CLNEF++ E   ++ KC H FH NC+D WL + ++CPLCR+ V
Subjt:  ECAICLNEFKKGEKCWIMSKCCHMFHRNCVDRWLKAERHCPLCRSCV

Q9SK92 E3 ubiquitin-protein ligase ATL154.4e-1048.89Show/hide
Query:  ECAICLNEFKKGEKCWIMSKCCHMFHRNCVDRWLKAERHCPLCRS
        EC +CLNEF+  E   ++ +CCH+FH  C+D WL+++  CPLCR+
Subjt:  ECAICLNEFKKGEKCWIMSKCCHMFHRNCVDRWLKAERHCPLCRS

Q9SRM0 RING-H2 finger protein ATL664.4e-1055.56Show/hide
Query:  EECAICLNEFKKGEKCWIMSKCCHMFHRNCVDRWLKAERHCPLCR
        +EC ICL  F++GEK  ++  C H +H  CVDRWLK E  CPLCR
Subjt:  EECAICLNEFKKGEKCWIMSKCCHMFHRNCVDRWLKAERHCPLCR

Arabidopsis top hitse value%identityAlignment
AT1G04360.1 RING/U-box superfamily protein3.3e-1353.06Show/hide
Query:  EECAICLNEFKKGEKCWIMSKCCHMFHRNCVDRWLKAERHCPLCRSCVS
        +EC++CLNEF++ EK  I+  CCH+FH +C+D WL+   +CPLCR+ VS
Subjt:  EECAICLNEFKKGEKCWIMSKCCHMFHRNCVDRWLKAERHCPLCRSCVS

AT1G22500.1 RING/U-box superfamily protein3.1e-1148.89Show/hide
Query:  ECAICLNEFKKGEKCWIMSKCCHMFHRNCVDRWLKAERHCPLCRS
        EC +CLNEF+  E   ++ +CCH+FH  C+D WL+++  CPLCR+
Subjt:  ECAICLNEFKKGEKCWIMSKCCHMFHRNCVDRWLKAERHCPLCRS

AT1G72200.1 RING/U-box superfamily protein1.1e-1151.11Show/hide
Query:  ECAICLNEFKKGEKCWIMSKCCHMFHRNCVDRWLKAERHCPLCRS
        EC++CLNEF+  E   ++ KCCH+FH  C+D WL++   CPLCR+
Subjt:  ECAICLNEFKKGEKCWIMSKCCHMFHRNCVDRWLKAERHCPLCRS

AT3G11110.1 RING/U-box superfamily protein3.1e-1155.56Show/hide
Query:  EECAICLNEFKKGEKCWIMSKCCHMFHRNCVDRWLKAERHCPLCR
        +EC ICL  F++GEK  ++  C H +H  CVDRWLK E  CPLCR
Subjt:  EECAICLNEFKKGEKCWIMSKCCHMFHRNCVDRWLKAERHCPLCR

AT5G10380.1 RING/U-box superfamily protein1.1e-1151.06Show/hide
Query:  ECAICLNEFKKGEKCWIMSKCCHMFHRNCVDRWLKAERHCPLCRSCV
        EC++CLNEF++ E   ++ KC H FH NC+D WL + ++CPLCR+ V
Subjt:  ECAICLNEFKKGEKCWIMSKCCHMFHRNCVDRWLKAERHCPLCRSCV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAAGAATGCGCGATTTGCCTGAACGAATTTAAGAAGGGAGAAAAGTGCTGGATCATGAGTAAATGCTGCCACATGTTTCACCGGAACTGCGTTGACCGGTGGCTGAAGGC
GGAGCGCCACTGCCCGCTTTGCCGGAGCTGCGTTTCT
mRNA sequenceShow/hide mRNA sequence
GAAGAATGCGCGATTTGCCTGAACGAATTTAAGAAGGGAGAAAAGTGCTGGATCATGAGTAAATGCTGCCACATGTTTCACCGGAACTGCGTTGACCGGTGGCTGAAGGC
GGAGCGCCACTGCCCGCTTTGCCGGAGCTGCGTTTCT
Protein sequenceShow/hide protein sequence
EECAICLNEFKKGEKCWIMSKCCHMFHRNCVDRWLKAERHCPLCRSCVS