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MC03g0229 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC03g0229
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionRetrotransposon protein
Genome locationMC03:5798390..5798581
RNA-Seq ExpressionMC03g0229
SyntenyMC03g0229
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050106.1 retrotransposon protein [Cucumis melo var. makuwa]2.92e-0842.86Show/hide
Query:  SAQRRRVFAELEPVPIMTLENYLAVVETLLADSNKVKTFLDFPPNWKYRYCMRLLG
        S+  +R++ +L+ +P M +++ L V E+LL D   +  FLD+P  WKYR CMR+LG
Subjt:  SAQRRRVFAELEPVPIMTLENYLAVVETLLADSNKVKTFLDFPPNWKYRYCMRLLG
KAA0063789.1 retrotransposon protein [Cucumis melo var. makuwa]8.84e-0450Show/hide
Query:  LENYLAVVETLLADSNKVKTFLDFPPNWKYRYCMRLLG
        L N    +E+LL D   +  FLD+P  WKYR CMR+LG
Subjt:  LENYLAVVETLLADSNKVKTFLDFPPNWKYRYCMRLLG
KAA0065306.1 retrotransposon protein [Cucumis melo var. makuwa]1.64e-0844.64Show/hide
Query:  SAQRRRVFAELEPVPIMTLENYLAVVETLLADSNKVKTFLDFPPNWKYRYCMRLLG
        S+  +R++ EL+ +P M +++ L V E+LL D   +  FLD+P  WKYR CMR+LG
Subjt:  SAQRRRVFAELEPVPIMTLENYLAVVETLLADSNKVKTFLDFPPNWKYRYCMRLLG
TrEMBL top hitse value%identityAlignment
A0A5A7U7F7 Retrotransposon protein1.41e-0842.86Show/hide
Query:  SAQRRRVFAELEPVPIMTLENYLAVVETLLADSNKVKTFLDFPPNWKYRYCMRLLG
        S+  +R++ +L+ +P M +++ L V E+LL D   +  FLD+P  WKYR CMR+LG
Subjt:  SAQRRRVFAELEPVPIMTLENYLAVVETLLADSNKVKTFLDFPPNWKYRYCMRLLG
A0A5A7VE44 Retrotransposon protein4.28e-0450Show/hide
Query:  LENYLAVVETLLADSNKVKTFLDFPPNWKYRYCMRLLG
        L N    +E+LL D   +  FLD+P  WKYR CMR+LG
Subjt:  LENYLAVVETLLADSNKVKTFLDFPPNWKYRYCMRLLG
A0A5A7VG45 Retrotransposon protein7.94e-0944.64Show/hide
Query:  SAQRRRVFAELEPVPIMTLENYLAVVETLLADSNKVKTFLDFPPNWKYRYCMRLLG
        S+  +R++ EL+ +P M +++ L V E+LL D   +  FLD+P  WKYR CMR+LG
Subjt:  SAQRRRVFAELEPVPIMTLENYLAVVETLLADSNKVKTFLDFPPNWKYRYCMRLLG
A0A5D3BPL3 Retrotransposon protein5.63e-0439.29Show/hide
Query:  ASAQRRRVFAELEPVPIMTLENYLAVVETLLADSNKVKTFLDFPPNWKYRYCMRLL
        AS  R++V  +LE +P +TL     ++  L+ + N +K FLD P N KY YC  +L
Subjt:  ASAQRRRVFAELEPVPIMTLENYLAVVETLLADSNKVKTFLDFPPNWKYRYCMRLL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCAACCAAAAGAGATGAAAGGGCCTCAGCTCAAAGGAGACGAGTGTTTGCAGAACTTGAACCCGTCCCTATAATGACATTGGAGAACTATTTGGCAGTCGTAGAAACTTT
ACTTGCAGACTCCAATAAGGTGAAAACATTCCTTGATTTTCCACCAAATTGGAAGTACAGGTACTGCATGCGTCTACTTGGA
mRNA sequenceShow/hide mRNA sequence
TCAACCAAAAGAGATGAAAGGGCCTCAGCTCAAAGGAGACGAGTGTTTGCAGAACTTGAACCCGTCCCTATAATGACATTGGAGAACTATTTGGCAGTCGTAGAAACTTT
ACTTGCAGACTCCAATAAGGTGAAAACATTCCTTGATTTTCCACCAAATTGGAAGTACAGGTACTGCATGCGTCTACTTGGA
Protein sequenceShow/hide protein sequence
STKRDERASAQRRRVFAELEPVPIMTLENYLAVVETLLADSNKVKTFLDFPPNWKYRYCMRLLG