; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC03g0235 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC03g0235
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationMC03:6094043..6094415
RNA-Seq ExpressionMC03g0235
SyntenyMC03g0235
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039592.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.56e-0630.83Show/hide
Query:  MAFKETSSRNVASNDSYLGPTTCDRAKGMMD------------------------ALFNSSSENEFPPSSARHKGTSNPNIMYFVMMVDASTMEEKIADM
        MA K+ +S++  ++D+Y GP TC   KG+                           L ++S  +    +S++ K  + P++M  VMMVD  T+E  +A+M
Subjt:  MAFKETSSRNVASNDSYLGPTTCDRAKGMMD------------------------ALFNSSSENEFPPSSARHKGTSNPNIMYFVMMVDASTMEEKIADM

Query:  EKKLNMLTKMVEERDYKIAS
        E+K+N+L K++EERD++I +
Subjt:  EKKLNMLTKMVEERDYKIAS

KAA0048603.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]6.37e-0736.27Show/hide
Query:  MAFKETSSRNVASNDSYLGPTTCDRAKGMM------DALFNSSSENEFPPSSARHKGTSNPNIMYFVMMVDASTMEEKIADMEKKLNMLTKMVEERDYKI
        MA K+ +S +  ++D+Y GP T  R+KG++      + L+++S       +S++ K  ++P++M  VMM D  T E  +A+ME+K+N L K+VEERD++I
Subjt:  MAFKETSSRNVASNDSYLGPTTCDRAKGMM------DALFNSSSENEFPPSSARHKGTSNPNIMYFVMMVDASTMEEKIADMEKKLNMLTKMVEERDYKI

Query:  AS
         +
Subjt:  AS

KAA0053586.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.08e-0735.42Show/hide
Query:  MAFKETSSRNVASNDSYLGPTTCDRAKGMMDALFNSSSENEFPPSSARHKGTSNPNIMYFVMMVDASTMEEKIADMEKKLNMLTKMVEERDYKIAS
        MA K+ +S++   ND+Y+GP  C  +KG+                  + +  ++P++M  VMM D +T E  +A+ME+K+N+L K+VEERD+KI +
Subjt:  MAFKETSSRNVASNDSYLGPTTCDRAKGMMDALFNSSSENEFPPSSARHKGTSNPNIMYFVMMVDASTMEEKIADMEKKLNMLTKMVEERDYKIAS

TYK05006.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]2.77e-0730.77Show/hide
Query:  SSNKLARPVGPLYLSSLSQLKEVMAFKETSSRNVASNDSYLGPTTCDRAKGMMDALFNSSS--------------------ENEF----PPSSARHKGTS
        SSN++   +  + LSS    ++ MA K+ +S +  +ND+Y GP T  R KG++      S+                    EN        +S++ K  +
Subjt:  SSNKLARPVGPLYLSSLSQLKEVMAFKETSSRNVASNDSYLGPTTCDRAKGMMDALFNSSS--------------------ENEF----PPSSARHKGTS

Query:  NPNIMYFVMMVDASTMEEKIADMEKKLNMLTKMVEERDYKIAS
        +P++M  VMM D +T E  +A+ME+K+N L  +VEERD++I +
Subjt:  NPNIMYFVMMVDASTMEEKIADMEKKLNMLTKMVEERDYKIAS

TYK15314.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.08e-0737.5Show/hide
Query:  MAFKETSSRNVASNDSYLGPTTCDRAKGMMDALFNSSSENEFPPSSARHKGTSNPNIMYFVMMVDASTMEEKIADMEKKLNMLTKMVEERDYKIAS
        MA K+ +S++  ++D+Y+GP T  R+KG+       S  N       + K  + P++M  VMM D ST E  + DME+K+N L K++EERD++I +
Subjt:  MAFKETSSRNVASNDSYLGPTTCDRAKGMMDALFNSSSENEFPPSSARHKGTSNPNIMYFVMMVDASTMEEKIADMEKKLNMLTKMVEERDYKIAS

TrEMBL top hitse value%identityAlignment
A0A5A7T802 Ty3-gypsy retrotransposon protein7.55e-0730.83Show/hide
Query:  MAFKETSSRNVASNDSYLGPTTCDRAKGMMD------------------------ALFNSSSENEFPPSSARHKGTSNPNIMYFVMMVDASTMEEKIADM
        MA K+ +S++  ++D+Y GP TC   KG+                           L ++S  +    +S++ K  + P++M  VMMVD  T+E  +A+M
Subjt:  MAFKETSSRNVASNDSYLGPTTCDRAKGMMD------------------------ALFNSSSENEFPPSSARHKGTSNPNIMYFVMMVDASTMEEKIADM

Query:  EKKLNMLTKMVEERDYKIAS
        E+K+N+L K++EERD++I +
Subjt:  EKKLNMLTKMVEERDYKIAS

A0A5A7TYE9 Ty3-gypsy retrotransposon protein3.09e-0736.27Show/hide
Query:  MAFKETSSRNVASNDSYLGPTTCDRAKGMM------DALFNSSSENEFPPSSARHKGTSNPNIMYFVMMVDASTMEEKIADMEKKLNMLTKMVEERDYKI
        MA K+ +S +  ++D+Y GP T  R+KG++      + L+++S       +S++ K  ++P++M  VMM D  T E  +A+ME+K+N L K+VEERD++I
Subjt:  MAFKETSSRNVASNDSYLGPTTCDRAKGMM------DALFNSSSENEFPPSSARHKGTSNPNIMYFVMMVDASTMEEKIADMEKKLNMLTKMVEERDYKI

Query:  AS
         +
Subjt:  AS

A0A5A7UH83 Ty3-gypsy retrotransposon protein5.22e-0835.42Show/hide
Query:  MAFKETSSRNVASNDSYLGPTTCDRAKGMMDALFNSSSENEFPPSSARHKGTSNPNIMYFVMMVDASTMEEKIADMEKKLNMLTKMVEERDYKIAS
        MA K+ +S++   ND+Y+GP  C  +KG+                  + +  ++P++M  VMM D +T E  +A+ME+K+N+L K+VEERD+KI +
Subjt:  MAFKETSSRNVASNDSYLGPTTCDRAKGMMDALFNSSSENEFPPSSARHKGTSNPNIMYFVMMVDASTMEEKIADMEKKLNMLTKMVEERDYKIAS

A0A5D3C3J8 Ty3-gypsy retrotransposon protein1.34e-0730.77Show/hide
Query:  SSNKLARPVGPLYLSSLSQLKEVMAFKETSSRNVASNDSYLGPTTCDRAKGMMDALFNSSS--------------------ENEF----PPSSARHKGTS
        SSN++   +  + LSS    ++ MA K+ +S +  +ND+Y GP T  R KG++      S+                    EN        +S++ K  +
Subjt:  SSNKLARPVGPLYLSSLSQLKEVMAFKETSSRNVASNDSYLGPTTCDRAKGMMDALFNSSS--------------------ENEF----PPSSARHKGTS

Query:  NPNIMYFVMMVDASTMEEKIADMEKKLNMLTKMVEERDYKIAS
        +P++M  VMM D +T E  +A+ME+K+N L  +VEERD++I +
Subjt:  NPNIMYFVMMVDASTMEEKIADMEKKLNMLTKMVEERDYKIAS

A0A5D3CWK6 Ty3-gypsy retrotransposon protein5.22e-0837.5Show/hide
Query:  MAFKETSSRNVASNDSYLGPTTCDRAKGMMDALFNSSSENEFPPSSARHKGTSNPNIMYFVMMVDASTMEEKIADMEKKLNMLTKMVEERDYKIAS
        MA K+ +S++  ++D+Y+GP T  R+KG+       S  N       + K  + P++M  VMM D ST E  + DME+K+N L K++EERD++I +
Subjt:  MAFKETSSRNVASNDSYLGPTTCDRAKGMMDALFNSSSENEFPPSSARHKGTSNPNIMYFVMMVDASTMEEKIADMEKKLNMLTKMVEERDYKIAS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTCTTAATGAATTTCTCGTCGAACAAATTGGCACGTCCAGTGGGACCTCTCTACCTCTCATCTCTTTCTCAACTAAAAGAAGTGATGGCATTCAAGGAAACTTCATCGAG
GAATGTTGCTTCAAACGACTCTTACTTGGGTCCAACGACTTGCGATCGCGCCAAGGGAATGATGGATGCCCTGTTCAATTCAAGTTCGGAGAATGAATTTCCTCCTTCCT
CTGCCCGTCACAAAGGAACATCTAATCCGAACATCATGTACTTTGTCATGATGGTTGATGCATCCACCATGGAAGAAAAAATAGCAGATATGGAGAAGAAACTCAACATG
TTAACGAAGATGGTTGAAGAAAGGGACTATAAGATCGCTTCT
mRNA sequenceShow/hide mRNA sequence
TTCTTAATGAATTTCTCGTCGAACAAATTGGCACGTCCAGTGGGACCTCTCTACCTCTCATCTCTTTCTCAACTAAAAGAAGTGATGGCATTCAAGGAAACTTCATCGAG
GAATGTTGCTTCAAACGACTCTTACTTGGGTCCAACGACTTGCGATCGCGCCAAGGGAATGATGGATGCCCTGTTCAATTCAAGTTCGGAGAATGAATTTCCTCCTTCCT
CTGCCCGTCACAAAGGAACATCTAATCCGAACATCATGTACTTTGTCATGATGGTTGATGCATCCACCATGGAAGAAAAAATAGCAGATATGGAGAAGAAACTCAACATG
TTAACGAAGATGGTTGAAGAAAGGGACTATAAGATCGCTTCT
Protein sequenceShow/hide protein sequence
FLMNFSSNKLARPVGPLYLSSLSQLKEVMAFKETSSRNVASNDSYLGPTTCDRAKGMMDALFNSSSENEFPPSSARHKGTSNPNIMYFVMMVDASTMEEKIADMEKKLNM
LTKMVEERDYKIAS