; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC03g0247 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC03g0247
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionTHO complex subunit 4A-like
Genome locationMC03:6854974..6859295
RNA-Seq ExpressionMC03g0247
SyntenyMC03g0247
Gene Ontology termsGO:0006406 - mRNA export from nucleus (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR025715 - Chromatin target of PRMT1 protein, C-terminal
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583468.1 THO complex subunit 4A, partial [Cucurbita argyrosperma subsp. sororia]1.48e-13385.08Show/hide
Query:  MAEPLDMSLDDIIKNNRKSGSGNSSFRGRGGAP-GPGPSRRFRSRGLNRAAPYSTPKAPEAAWSHHMFVDHGAAYPSQPPRASAIQTGTKLYVSNLDYGV
        MAEPLDMSLDDIIKNN+KSGS  S+FRGRGGA  GPGPSRRFR+RGLNRAAPYST +APE AWSH MFVDHGAAYPSQP RASAI+TGTKLYVSNLDYGV
Subjt:  MAEPLDMSLDDIIKNNRKSGSGNSSFRGRGGAP-GPGPSRRFRSRGLNRAAPYSTPKAPEAAWSHHMFVDHGAAYPSQPPRASAIQTGTKLYVSNLDYGV

Query:  SNEDIKELFSEVGDLKRYSINYDKSGRSKGTAEVVFSKQSDAIAAIKRYNNVQLDGKPMKLEIVGTNIVTPVVPAASNAIASFGNSTGFPRGGRALGVGR
        SNEDIKELFSEVGDLKRYSINYDKSGRSKGTAE+VFS+Q+DA+AAIKRYNNVQLDGK MKLEIVGTNIVTP +PA++N   +FGN  GF RGG  LG  R
Subjt:  SNEDIKELFSEVGDLKRYSINYDKSGRSKGTAEVVFSKQSDAIAAIKRYNNVQLDGKPMKLEIVGTNIVTPVVPAASNAIASFGNSTGFPRGGRALGVGR

Query:  SRGGGRGRGPGRGGRGRG---RGRGEKLSAEDLDADLEKYHEEAMQIN
        +RGGGRGRGPGRGGRGRG   RGRGEKLSAEDLDADLEKYHEEAMQIN
Subjt:  SRGGGRGRGPGRGGRGRG---RGRGEKLSAEDLDADLEKYHEEAMQIN

XP_004149042.2 THO complex subunit 4A isoform X1 [Cucumis sativus]1.39e-13383.59Show/hide
Query:  MAEPLDMSLDDIIKNNRKSGSGNSSFRGRGGAP-GPGPSRRFRSRGLNRAAPYSTPKAPEAAWSHHMFVDHGAAYPSQPPRASAIQTGTKLYVSNLDYGV
        MAEPLDMSLDDIIKNN+KSGS  S+FR RGGA  GPGPSRRFR+RGLNRA PYST KAPE AWSH MFVDHGAAYPS PPRASAI+TGTKLYVSNLDYGV
Subjt:  MAEPLDMSLDDIIKNNRKSGSGNSSFRGRGGAP-GPGPSRRFRSRGLNRAAPYSTPKAPEAAWSHHMFVDHGAAYPSQPPRASAIQTGTKLYVSNLDYGV

Query:  SNEDIKELFSEVGDLKRYSINYDKSGRSKGTAEVVFSKQSDAIAAIKRYNNVQLDGKPMKLEIVGTNIVTPVVPAASNAIASFGNSTGFPRGGRALGVGR
        SNEDIKELFSEVGD+KRYSINYDKSGRSKGTAE+VFS+Q+DA+AAIKRYNNVQLDGKPMKLEIVGTNIVTP VPA SNA  SFGN  GFPRGGRA+G  R
Subjt:  SNEDIKELFSEVGDLKRYSINYDKSGRSKGTAEVVFSKQSDAIAAIKRYNNVQLDGKPMKLEIVGTNIVTPVVPAASNAIASFGNSTGFPRGGRALGVGR

Query:  SRGGGRGRGPGRG-GRGRG----------RGRGEKLSAEDLDADLEKYHEEAMQIN
        +RGGGRGRGPGRG GRGRG          RG GEKLSAEDLDADL+KYHEEAMQIN
Subjt:  SRGGGRGRGPGRG-GRGRG----------RGRGEKLSAEDLDADLEKYHEEAMQIN

XP_008457549.1 PREDICTED: THO complex subunit 4A [Cucumis melo]6.03e-13685.26Show/hide
Query:  MAEPLDMSLDDIIKNNRKSGSGNSSFRGRGGAP-GPGPSRRFRSRGLNRAAPYSTPKAPEAAWSHHMFVDHGAAYPSQPPRASAIQTGTKLYVSNLDYGV
        MAEPLDMSLDDIIKNN+KSGS  S+FR RGGA  GPGPSRRFR+RGLNRA PYST KAPE AWSH MFVDHGAAYPS PPRASAI+TGTKLYVSNLDYGV
Subjt:  MAEPLDMSLDDIIKNNRKSGSGNSSFRGRGGAP-GPGPSRRFRSRGLNRAAPYSTPKAPEAAWSHHMFVDHGAAYPSQPPRASAIQTGTKLYVSNLDYGV

Query:  SNEDIKELFSEVGDLKRYSINYDKSGRSKGTAEVVFSKQSDAIAAIKRYNNVQLDGKPMKLEIVGTNIVTPVVPAASNAIASFGNSTGFPRGGRALGVGR
        SNEDIKELFSEVGDLKRYSINYDKSGRSKGTAE++FS+ +DA+AAIKRYNNVQLDGKPMKLEIVGTNIVTP VPA SNA  SFGN  GFPRGGRA+G  R
Subjt:  SNEDIKELFSEVGDLKRYSINYDKSGRSKGTAEVVFSKQSDAIAAIKRYNNVQLDGKPMKLEIVGTNIVTPVVPAASNAIASFGNSTGFPRGGRALGVGR

Query:  SRGGGRGRGPGRGGRGRG------RGRGEKLSAEDLDADLEKYHEEAMQIN
        +RGGGRGRGPGRGGRGRG      RGRGEKLSAEDLDADL+KYHEEAMQIN
Subjt:  SRGGGRGRGPGRGGRGRG------RGRGEKLSAEDLDADLEKYHEEAMQIN

XP_022156166.1 THO complex subunit 4A-like [Momordica charantia]1.12e-165100Show/hide
Query:  MAEPLDMSLDDIIKNNRKSGSGNSSFRGRGGAPGPGPSRRFRSRGLNRAAPYSTPKAPEAAWSHHMFVDHGAAYPSQPPRASAIQTGTKLYVSNLDYGVS
        MAEPLDMSLDDIIKNNRKSGSGNSSFRGRGGAPGPGPSRRFRSRGLNRAAPYSTPKAPEAAWSHHMFVDHGAAYPSQPPRASAIQTGTKLYVSNLDYGVS
Subjt:  MAEPLDMSLDDIIKNNRKSGSGNSSFRGRGGAPGPGPSRRFRSRGLNRAAPYSTPKAPEAAWSHHMFVDHGAAYPSQPPRASAIQTGTKLYVSNLDYGVS

Query:  NEDIKELFSEVGDLKRYSINYDKSGRSKGTAEVVFSKQSDAIAAIKRYNNVQLDGKPMKLEIVGTNIVTPVVPAASNAIASFGNSTGFPRGGRALGVGRS
        NEDIKELFSEVGDLKRYSINYDKSGRSKGTAEVVFSKQSDAIAAIKRYNNVQLDGKPMKLEIVGTNIVTPVVPAASNAIASFGNSTGFPRGGRALGVGRS
Subjt:  NEDIKELFSEVGDLKRYSINYDKSGRSKGTAEVVFSKQSDAIAAIKRYNNVQLDGKPMKLEIVGTNIVTPVVPAASNAIASFGNSTGFPRGGRALGVGRS

Query:  RGGGRGRGPGRGGRGRGRGRGEKLSAEDLDADLEKYHEEAMQIN
        RGGGRGRGPGRGGRGRGRGRGEKLSAEDLDADLEKYHEEAMQIN
Subjt:  RGGGRGRGPGRGGRGRGRGRGEKLSAEDLDADLEKYHEEAMQIN

XP_038895300.1 THO complex subunit 4A-like [Benincasa hispida]4.33e-14088.35Show/hide
Query:  MAEPLDMSLDDIIKNNRKSGSGNSSFRGRGGAP-GPGPSRRFRSRGLNRAAPYSTPKAPEAAWSHHMFVDHGAAYPSQPPRASAIQTGTKLYVSNLDYGV
        MAEPLDMSLDDIIKNN+KSGS  S+FRGRGGA  GPGPSRRFR+RGLNRAAPYS  KAPE AWSH MFVDHGAAYPSQPPRASAI+TGTKLYVSNLDYGV
Subjt:  MAEPLDMSLDDIIKNNRKSGSGNSSFRGRGGAP-GPGPSRRFRSRGLNRAAPYSTPKAPEAAWSHHMFVDHGAAYPSQPPRASAIQTGTKLYVSNLDYGV

Query:  SNEDIKELFSEVGDLKRYSINYDKSGRSKGTAEVVFSKQSDAIAAIKRYNNVQLDGKPMKLEIVGTNIVTPVVPAASNAIASFGNSTGFPRGGRALGVGR
        SNEDIKELFSEVGDLKRYSINYDKSGRSKGTAE+VFS+QSDA+AAIKRYNNVQLDGKPMKLEIVGTNIVTP VPA+SNA   FGN  GFPRGGRALG  R
Subjt:  SNEDIKELFSEVGDLKRYSINYDKSGRSKGTAEVVFSKQSDAIAAIKRYNNVQLDGKPMKLEIVGTNIVTPVVPAASNAIASFGNSTGFPRGGRALGVGR

Query:  SRGGGRGRGPGRGGRGRG----RGRGEKLSAEDLDADLEKYHEEAMQIN
        +RGGGRGRGPGRGGRGRG    RGRGEKLSAEDLDADLEKYHEEAMQIN
Subjt:  SRGGGRGRGPGRGGRGRG----RGRGEKLSAEDLDADLEKYHEEAMQIN

TrEMBL top hitse value%identityAlignment
A0A0A0LUQ3 RRM domain-containing protein6.72e-13483.59Show/hide
Query:  MAEPLDMSLDDIIKNNRKSGSGNSSFRGRGGAP-GPGPSRRFRSRGLNRAAPYSTPKAPEAAWSHHMFVDHGAAYPSQPPRASAIQTGTKLYVSNLDYGV
        MAEPLDMSLDDIIKNN+KSGS  S+FR RGGA  GPGPSRRFR+RGLNRA PYST KAPE AWSH MFVDHGAAYPS PPRASAI+TGTKLYVSNLDYGV
Subjt:  MAEPLDMSLDDIIKNNRKSGSGNSSFRGRGGAP-GPGPSRRFRSRGLNRAAPYSTPKAPEAAWSHHMFVDHGAAYPSQPPRASAIQTGTKLYVSNLDYGV

Query:  SNEDIKELFSEVGDLKRYSINYDKSGRSKGTAEVVFSKQSDAIAAIKRYNNVQLDGKPMKLEIVGTNIVTPVVPAASNAIASFGNSTGFPRGGRALGVGR
        SNEDIKELFSEVGD+KRYSINYDKSGRSKGTAE+VFS+Q+DA+AAIKRYNNVQLDGKPMKLEIVGTNIVTP VPA SNA  SFGN  GFPRGGRA+G  R
Subjt:  SNEDIKELFSEVGDLKRYSINYDKSGRSKGTAEVVFSKQSDAIAAIKRYNNVQLDGKPMKLEIVGTNIVTPVVPAASNAIASFGNSTGFPRGGRALGVGR

Query:  SRGGGRGRGPGRG-GRGRG----------RGRGEKLSAEDLDADLEKYHEEAMQIN
        +RGGGRGRGPGRG GRGRG          RG GEKLSAEDLDADL+KYHEEAMQIN
Subjt:  SRGGGRGRGPGRG-GRGRG----------RGRGEKLSAEDLDADLEKYHEEAMQIN

A0A1S3C5R6 THO complex subunit 4A2.92e-13685.26Show/hide
Query:  MAEPLDMSLDDIIKNNRKSGSGNSSFRGRGGAP-GPGPSRRFRSRGLNRAAPYSTPKAPEAAWSHHMFVDHGAAYPSQPPRASAIQTGTKLYVSNLDYGV
        MAEPLDMSLDDIIKNN+KSGS  S+FR RGGA  GPGPSRRFR+RGLNRA PYST KAPE AWSH MFVDHGAAYPS PPRASAI+TGTKLYVSNLDYGV
Subjt:  MAEPLDMSLDDIIKNNRKSGSGNSSFRGRGGAP-GPGPSRRFRSRGLNRAAPYSTPKAPEAAWSHHMFVDHGAAYPSQPPRASAIQTGTKLYVSNLDYGV

Query:  SNEDIKELFSEVGDLKRYSINYDKSGRSKGTAEVVFSKQSDAIAAIKRYNNVQLDGKPMKLEIVGTNIVTPVVPAASNAIASFGNSTGFPRGGRALGVGR
        SNEDIKELFSEVGDLKRYSINYDKSGRSKGTAE++FS+ +DA+AAIKRYNNVQLDGKPMKLEIVGTNIVTP VPA SNA  SFGN  GFPRGGRA+G  R
Subjt:  SNEDIKELFSEVGDLKRYSINYDKSGRSKGTAEVVFSKQSDAIAAIKRYNNVQLDGKPMKLEIVGTNIVTPVVPAASNAIASFGNSTGFPRGGRALGVGR

Query:  SRGGGRGRGPGRGGRGRG------RGRGEKLSAEDLDADLEKYHEEAMQIN
        +RGGGRGRGPGRGGRGRG      RGRGEKLSAEDLDADL+KYHEEAMQIN
Subjt:  SRGGGRGRGPGRGGRGRG------RGRGEKLSAEDLDADLEKYHEEAMQIN

A0A6J1DPW3 THO complex subunit 4A-like5.42e-166100Show/hide
Query:  MAEPLDMSLDDIIKNNRKSGSGNSSFRGRGGAPGPGPSRRFRSRGLNRAAPYSTPKAPEAAWSHHMFVDHGAAYPSQPPRASAIQTGTKLYVSNLDYGVS
        MAEPLDMSLDDIIKNNRKSGSGNSSFRGRGGAPGPGPSRRFRSRGLNRAAPYSTPKAPEAAWSHHMFVDHGAAYPSQPPRASAIQTGTKLYVSNLDYGVS
Subjt:  MAEPLDMSLDDIIKNNRKSGSGNSSFRGRGGAPGPGPSRRFRSRGLNRAAPYSTPKAPEAAWSHHMFVDHGAAYPSQPPRASAIQTGTKLYVSNLDYGVS

Query:  NEDIKELFSEVGDLKRYSINYDKSGRSKGTAEVVFSKQSDAIAAIKRYNNVQLDGKPMKLEIVGTNIVTPVVPAASNAIASFGNSTGFPRGGRALGVGRS
        NEDIKELFSEVGDLKRYSINYDKSGRSKGTAEVVFSKQSDAIAAIKRYNNVQLDGKPMKLEIVGTNIVTPVVPAASNAIASFGNSTGFPRGGRALGVGRS
Subjt:  NEDIKELFSEVGDLKRYSINYDKSGRSKGTAEVVFSKQSDAIAAIKRYNNVQLDGKPMKLEIVGTNIVTPVVPAASNAIASFGNSTGFPRGGRALGVGRS

Query:  RGGGRGRGPGRGGRGRGRGRGEKLSAEDLDADLEKYHEEAMQIN
        RGGGRGRGPGRGGRGRGRGRGEKLSAEDLDADLEKYHEEAMQIN
Subjt:  RGGGRGRGPGRGGRGRGRGRGEKLSAEDLDADLEKYHEEAMQIN

A0A6J1HLI4 THO complex subunit 4B-like1.45e-13385.08Show/hide
Query:  MAEPLDMSLDDIIKNNRKSGSGNSSFRGRGGAP-GPGPSRRFRSRGLNRAAPYSTPKAPEAAWSHHMFVDHGAAYPSQPPRASAIQTGTKLYVSNLDYGV
        MAEPLDMSLDDIIKNN+KSGS  S+FRGRGGA  GPGPSRRFR+RGLNRAAPYST +APE AWSH MFVDHG+AYPSQP RASAI+TGTKLYVSNLDYGV
Subjt:  MAEPLDMSLDDIIKNNRKSGSGNSSFRGRGGAP-GPGPSRRFRSRGLNRAAPYSTPKAPEAAWSHHMFVDHGAAYPSQPPRASAIQTGTKLYVSNLDYGV

Query:  SNEDIKELFSEVGDLKRYSINYDKSGRSKGTAEVVFSKQSDAIAAIKRYNNVQLDGKPMKLEIVGTNIVTPVVPAASNAIASFGNSTGFPRGGRALGVGR
        SNEDIKELFSEVGDLKRYSINYDKSGRSKGTAE+VFS+Q+DA+AAIKRYNNVQLDGK MKLEIVGTNIVTP VPA++N   +FGN  GF RGG  LG  R
Subjt:  SNEDIKELFSEVGDLKRYSINYDKSGRSKGTAEVVFSKQSDAIAAIKRYNNVQLDGKPMKLEIVGTNIVTPVVPAASNAIASFGNSTGFPRGGRALGVGR

Query:  SRGGGRGRGPGRGGRGRG---RGRGEKLSAEDLDADLEKYHEEAMQIN
        +RGGGRGRGPGRGGRGRG   RGRGEKLSAEDLDADLEKYHEEAMQIN
Subjt:  SRGGGRGRGPGRGGRGRG---RGRGEKLSAEDLDADLEKYHEEAMQIN

A0A6J1I3N4 THO complex subunit 4A-like1.48e-13285.08Show/hide
Query:  MAEPLDMSLDDIIKNNRKSGSGNSSFRGRGGAP-GPGPSRRFRSRGLNRAAPYSTPKAPEAAWSHHMFVDHGAAYPSQPPRASAIQTGTKLYVSNLDYGV
        MAEPLDMSLDDIIKNN+KSGS  S+FRGRGGA  GPGPSRRFR+RGLNRAAPYST +APE AWSH MFVDHGAAYPSQP RASAI+TGTKLYVSNLDYGV
Subjt:  MAEPLDMSLDDIIKNNRKSGSGNSSFRGRGGAP-GPGPSRRFRSRGLNRAAPYSTPKAPEAAWSHHMFVDHGAAYPSQPPRASAIQTGTKLYVSNLDYGV

Query:  SNEDIKELFSEVGDLKRYSINYDKSGRSKGTAEVVFSKQSDAIAAIKRYNNVQLDGKPMKLEIVGTNIVTPVVPAASNAIASFGNSTGFPRGGRALGVGR
        SNEDIKELFSEVGDLKRYSINYDKSGRSKGTAE+VFS+Q+DA+AAIKRYNNVQLDGK MKLEIVGTNIVTP VPA++N   +FGN  GF RGG  LG  R
Subjt:  SNEDIKELFSEVGDLKRYSINYDKSGRSKGTAEVVFSKQSDAIAAIKRYNNVQLDGKPMKLEIVGTNIVTPVVPAASNAIASFGNSTGFPRGGRALGVGR

Query:  SRGGGRGRGPGRGGRGRG---RGRGEKLSAEDLDADLEKYHEEAMQIN
        +RGGGRGRGPGRGGRG G   RGRGEKLSAEDLDADLEKYHEEAMQIN
Subjt:  SRGGGRGRGPGRGGRGRG---RGRGEKLSAEDLDADLEKYHEEAMQIN

SwissProt top hitse value%identityAlignment
B5FXN8 THO complex subunit 41.6e-3644.11Show/hide
Query:  MAEPLDMSLDDIIKNNRK---SGSGNSSFRGRGG-APGPGPSR------------------RFRSRGLNRAAPYSTPKAPEAAWSHHMFVDHGAAYPSQP
        MA+ +DMSLDDIIK NR    +  G    RGRGG A G GP R                    R  G NR APYS PK     W H +F D G       
Subjt:  MAEPLDMSLDDIIKNNRK---SGSGNSSFRGRGG-APGPGPSR------------------RFRSRGLNRAAPYSTPKAPEAAWSHHMFVDHGAAYPSQP

Query:  PRASAIQTGTKLYVSNLDYGVSNEDIKELFSEVGDLKRYSINYDKSGRSKGTAEVVFSKQSDAIAAIKRYNNVQLDGKPMKLEIVGTNIVTPVVPAASNA
           + ++TG KL VSNLD+GVS+ DI+ELF+E G LK+ +++YD+SGRS GTA+V F +++DA+ A+K+YN V LDG+PM +++V + I T   PA S  
Subjt:  PRASAIQTGTKLYVSNLDYGVSNEDIKELFSEVGDLKRYSINYDKSGRSKGTAEVVFSKQSDAIAAIKRYNNVQLDGKPMKLEIVGTNIVTPVVPAASNA

Query:  IASFGNSTGFPRGGRALGVGRSRGGGRGRGPGRGGRGRGRGRG----EKLSAEDLDADLEKYH
             N  G  R    L  G   GGG  RG   G RGRGRG G    ++LSAE+LDA L+ Y+
Subjt:  IASFGNSTGFPRGGRALGVGRSRGGGRGRGPGRGGRGRGRGRG----EKLSAEDLDADLEKYH

O08583 THO complex subunit 42.1e-3642.7Show/hide
Query:  MAEPLDMSLDDIIKNNR--KSGSGNSSFRGRGGAPG----------------------PGPSRRFRSRGLNRAAPYSTPKAPEAAWSHHMFVDHGAAYPS
        MA+ +DMSLDDIIK NR  + G G    RGR G+ G                      P  +R     G NR APYS PK     W H +F D G     
Subjt:  MAEPLDMSLDDIIKNNR--KSGSGNSSFRGRGGAPG----------------------PGPSRRFRSRGLNRAAPYSTPKAPEAAWSHHMFVDHGAAYPS

Query:  QPPRASAIQTGTKLYVSNLDYGVSNEDIKELFSEVGDLKRYSINYDKSGRSKGTAEVVFSKQSDAIAAIKRYNNVQLDGKPMKLEIVGTNIVTPVVPAAS
             + ++TG KL VSNLD+GVS+ DI+ELF+E G LK+ +++YD+SGRS GTA+V F +++DA+ A+K+YN V LDG+PM +++V + I T   PA S
Subjt:  QPPRASAIQTGTKLYVSNLDYGVSNEDIKELFSEVGDLKRYSINYDKSGRSKGTAEVVFSKQSDAIAAIKRYNNVQLDGKPMKLEIVGTNIVTPVVPAAS

Query:  NAIASFGNSTGFPRGG--RALGVGRSRGGGRGRGPGRGGRGRGRGRG----EKLSAEDLDADLEKYH
                     RGG  R  G G   GGG  RG   G RGRGRG G    ++LSAE+LDA L+ Y+
Subjt:  NAIASFGNSTGFPRGG--RALGVGRSRGGGRGRGPGRGGRGRGRGRG----EKLSAEDLDADLEKYH

Q58EA2 THO complex subunit 4-A2.7e-3644.11Show/hide
Query:  MAEPLDMSLDDIIKNNRK---SGSGNSSFRG------RGGAPG----------PGPSRRFRSR------GLNRAAPYSTPKAPEAAWSHHMFVDHGAAYP
        M + +DMSLDDIIK NR    SG G    RG      RGGA G          PG     RSR      G NR  PYS PK     W H +F D G    
Subjt:  MAEPLDMSLDDIIKNNRK---SGSGNSSFRG------RGGAPG----------PGPSRRFRSR------GLNRAAPYSTPKAPEAAWSHHMFVDHGAAYP

Query:  SQPPRASAIQTGTKLYVSNLDYGVSNEDIKELFSEVGDLKRYSINYDKSGRSKGTAEVVFSKQSDAIAAIKRYNNVQLDGKPMKLEIVGTNIVTPVVPAA
              + ++TG KL VSNLD+GVS+ DI+ELF+E G LK+ +++YD+SGRS GTA+V F +++DA+ A+K+YN V LDG+PM +++V + I     P  
Subjt:  SQPPRASAIQTGTKLYVSNLDYGVSNEDIKELFSEVGDLKRYSINYDKSGRSKGTAEVVFSKQSDAIAAIKRYNNVQLDGKPMKLEIVGTNIVTPVVPAA

Query:  SNAIASFGNSTGFPRGGRALGVGRSRGGGRGRGPGRG-GRGRGRGRGEKLSAEDLDADLEKYH
        S    S G     PRGG    +G + G  RGRG  RG GRG GR   ++LSAE+LDA L+ Y+
Subjt:  SNAIASFGNSTGFPRGGRALGVGRSRGGGRGRGPGRG-GRGRGRGRGEKLSAEDLDADLEKYH

Q8L719 THO complex subunit 4B9.6e-5853.45Show/hide
Query:  MAEPLDMSLDDIIKNNRK-SGS-------GNSSFRGRGGA-PGPGPSRRFRSRGLNRAAPYSTP----KAPEAAWSHHMFVDH---GAAYPSQPPR----
        M+  LDMSLDDIIK+NRK +GS       G ++  GRGG+    GPSRRF +R   R APYS P    +A +A W + +F       AA+          
Subjt:  MAEPLDMSLDDIIKNNRK-SGS-------GNSSFRGRGGA-PGPGPSRRFRSRGLNRAAPYSTP----KAPEAAWSHHMFVDH---GAAYPSQPPR----

Query:  ASAIQTGTKLYVSNLDYGVSNEDIKELFSEVGDLKRYSINYDKSGRSKGTAEVVFSKQSDAIAAIKRYNNVQLDGKPMKLEIVGTNIVTPVVPAASNAIA
         S+I+TGTKLY+SNLDYGVSNEDIKELFSEVGDLKRY I+YD+SGRSKGTAEVVFS++ DA+AA+KRYNNVQLDGK MK+EIVGTN+  P +P  + A  
Subjt:  ASAIQTGTKLYVSNLDYGVSNEDIKELFSEVGDLKRYSINYDKSGRSKGTAEVVFSKQSDAIAAIKRYNNVQLDGKPMKLEIVGTNIVTPVVPAASNAIA

Query:  SF------------------GNSTGFPRG-GRALGVGRSRGGGRGRGPGRGGRGR---------GRGRGEKLSAEDLDADLEKYHEEAMQ
         F                  GN  G  RG GR   +GR RGGG G G  RGGRG          GRGR E +SAEDLDA+L+KYH+EAM+
Subjt:  SF------------------GNSTGFPRG-GRALGVGRSRGGGRGRGPGRGGRGR---------GRGRGEKLSAEDLDADLEKYHEEAMQ

Q8L773 THO complex subunit 4A1.8e-6459.76Show/hide
Query:  MAEPLDMSLDDIIKNNRKSGSGNSSFRGRGGAPGPGPSRRFR-SRGLNRAAPYSTPKAPEAAWSHHMFVDHGAAYPSQPPRASA-IQTGTKLYVSNLDYG
        M+  LDMSLDD+I  NRKS  G    RG G   GPGP+RR   +R   R+APY + KAPE+ W H MF D    + S   R+SA I+TGTKLY+SNLDYG
Subjt:  MAEPLDMSLDDIIKNNRKSGSGNSSFRGRGGAPGPGPSRRFR-SRGLNRAAPYSTPKAPEAAWSHHMFVDHGAAYPSQPPRASA-IQTGTKLYVSNLDYG

Query:  VSNEDIKELFSEVGDLKRYSINYDKSGRSKGTAEVVFSKQSDAIAAIKRYNNVQLDGKPMKLEIVGTNIVTPVVPAASNAIASFGNSTGFP-RGGRALGV
        V NEDIKELF+EVG+LKRY++++D+SGRSKGTAEVV+S++ DA+AA+K+YN+VQLDGKPMK+EIVGTN+ T   P+   A    GNS G P RGG+  G 
Subjt:  VSNEDIKELFSEVGDLKRYSINYDKSGRSKGTAEVVFSKQSDAIAAIKRYNNVQLDGKPMKLEIVGTNIVTPVVPAASNAIASFGNSTGFP-RGGRALGV

Query:  GRSRGGGRGRGPGRGGRGRGR----GRGEKLSAEDLDADLEKYHEEAMQIN
        G+ RGGGRG G GRGG GRGR    G  EK+SAEDLDADL+KYH   M+ N
Subjt:  GRSRGGGRGRGPGRGGRGRGR----GRGEKLSAEDLDADLEKYHEEAMQIN

Arabidopsis top hitse value%identityAlignment
AT5G02530.1 RNA-binding (RRM/RBD/RNP motifs) family protein6.8e-5953.45Show/hide
Query:  MAEPLDMSLDDIIKNNRK-SGS-------GNSSFRGRGGA-PGPGPSRRFRSRGLNRAAPYSTP----KAPEAAWSHHMFVDH---GAAYPSQPPR----
        M+  LDMSLDDIIK+NRK +GS       G ++  GRGG+    GPSRRF +R   R APYS P    +A +A W + +F       AA+          
Subjt:  MAEPLDMSLDDIIKNNRK-SGS-------GNSSFRGRGGA-PGPGPSRRFRSRGLNRAAPYSTP----KAPEAAWSHHMFVDH---GAAYPSQPPR----

Query:  ASAIQTGTKLYVSNLDYGVSNEDIKELFSEVGDLKRYSINYDKSGRSKGTAEVVFSKQSDAIAAIKRYNNVQLDGKPMKLEIVGTNIVTPVVPAASNAIA
         S+I+TGTKLY+SNLDYGVSNEDIKELFSEVGDLKRY I+YD+SGRSKGTAEVVFS++ DA+AA+KRYNNVQLDGK MK+EIVGTN+  P +P  + A  
Subjt:  ASAIQTGTKLYVSNLDYGVSNEDIKELFSEVGDLKRYSINYDKSGRSKGTAEVVFSKQSDAIAAIKRYNNVQLDGKPMKLEIVGTNIVTPVVPAASNAIA

Query:  SF------------------GNSTGFPRG-GRALGVGRSRGGGRGRGPGRGGRGR---------GRGRGEKLSAEDLDADLEKYHEEAMQ
         F                  GN  G  RG GR   +GR RGGG G G  RGGRG          GRGR E +SAEDLDA+L+KYH+EAM+
Subjt:  SF------------------GNSTGFPRG-GRALGVGRSRGGGRGRGPGRGGRGR---------GRGRGEKLSAEDLDADLEKYHEEAMQ

AT5G02530.2 RNA-binding (RRM/RBD/RNP motifs) family protein1.5e-5853.47Show/hide
Query:  MAEPLDMSLDDIIKNNRK-SGS-------GNSSFRGRGGA-PGPGPSRRFRSRGLNRAAPYSTP----KAPEAAWSHHMFVDH---GAAYPSQPPR----
        M+  LDMSLDDIIK+NRK +GS       G ++  GRGG+    GPSRRF +R   R APYS P    +A +A W + +F       AA+          
Subjt:  MAEPLDMSLDDIIKNNRK-SGS-------GNSSFRGRGGA-PGPGPSRRFRSRGLNRAAPYSTP----KAPEAAWSHHMFVDH---GAAYPSQPPR----

Query:  ASAIQTGTKLYVSNLDYGVSNEDIKELFSEVGDLKRYSINYDKSGRSKGTAEVVFSKQSDAIAAIKRYNNVQLDGKPMKLEIVGTNIVTPVVPAASNAIA
         S+I+TGTKLY+SNLDYGVSNEDIKELFSEVGDLKRY I+YD+SGRSKGTAEVVFS++ DA+AA+KRYNNVQLDGK MK+EIVGTN+  P +P  + A  
Subjt:  ASAIQTGTKLYVSNLDYGVSNEDIKELFSEVGDLKRYSINYDKSGRSKGTAEVVFSKQSDAIAAIKRYNNVQLDGKPMKLEIVGTNIVTPVVPAASNAIA

Query:  SF--------------GNSTGFPRG---GRALGVGRSRGGGRGRGPGRGGRGR---------GRGRGEKLSAEDLDADLEKYHEEAMQ
         F              GN  G   G   GR   +GR RGGG G G  RGGRG          GRGR E +SAEDLDA+L+KYH+EAM+
Subjt:  SF--------------GNSTGFPRG---GRALGVGRSRGGGRGRGPGRGGRGR---------GRGRGEKLSAEDLDADLEKYHEEAMQ

AT5G59950.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.3e-6559.76Show/hide
Query:  MAEPLDMSLDDIIKNNRKSGSGNSSFRGRGGAPGPGPSRRFR-SRGLNRAAPYSTPKAPEAAWSHHMFVDHGAAYPSQPPRASA-IQTGTKLYVSNLDYG
        M+  LDMSLDD+I  NRKS  G    RG G   GPGP+RR   +R   R+APY + KAPE+ W H MF D    + S   R+SA I+TGTKLY+SNLDYG
Subjt:  MAEPLDMSLDDIIKNNRKSGSGNSSFRGRGGAPGPGPSRRFR-SRGLNRAAPYSTPKAPEAAWSHHMFVDHGAAYPSQPPRASA-IQTGTKLYVSNLDYG

Query:  VSNEDIKELFSEVGDLKRYSINYDKSGRSKGTAEVVFSKQSDAIAAIKRYNNVQLDGKPMKLEIVGTNIVTPVVPAASNAIASFGNSTGFP-RGGRALGV
        V NEDIKELF+EVG+LKRY++++D+SGRSKGTAEVV+S++ DA+AA+K+YN+VQLDGKPMK+EIVGTN+ T   P+   A    GNS G P RGG+  G 
Subjt:  VSNEDIKELFSEVGDLKRYSINYDKSGRSKGTAEVVFSKQSDAIAAIKRYNNVQLDGKPMKLEIVGTNIVTPVVPAASNAIASFGNSTGFP-RGGRALGV

Query:  GRSRGGGRGRGPGRGGRGRGR----GRGEKLSAEDLDADLEKYHEEAMQIN
        G+ RGGGRG G GRGG GRGR    G  EK+SAEDLDADL+KYH   M+ N
Subjt:  GRSRGGGRGRGPGRGGRGRGR----GRGEKLSAEDLDADLEKYHEEAMQIN

AT5G59950.3 RNA-binding (RRM/RBD/RNP motifs) family protein9.2e-6459.36Show/hide
Query:  MAEPLDMSLDDIIKNNRKSGSGNSSFRGRGGAPGPGPSRRFR-SRGLNRAAPYSTPKAPEAAWSHHMFVDHGAAYPSQPPRASA-IQTGTKLYVSNLDYG
        M+  LDMSLDD+I  NRKS  G    RG G   GPGP+RR   +R   R+APY +  APE+ W H MF D    + S   R+SA I+TGTKLY+SNLDYG
Subjt:  MAEPLDMSLDDIIKNNRKSGSGNSSFRGRGGAPGPGPSRRFR-SRGLNRAAPYSTPKAPEAAWSHHMFVDHGAAYPSQPPRASA-IQTGTKLYVSNLDYG

Query:  VSNEDIKELFSEVGDLKRYSINYDKSGRSKGTAEVVFSKQSDAIAAIKRYNNVQLDGKPMKLEIVGTNIVTPVVPAASNAIASFGNSTGFP-RGGRALGV
        V NEDIKELF+EVG+LKRY++++D+SGRSKGTAEVV+S++ DA+AA+K+YN+VQLDGKPMK+EIVGTN+ T   P+   A    GNS G P RGG+  G 
Subjt:  VSNEDIKELFSEVGDLKRYSINYDKSGRSKGTAEVVFSKQSDAIAAIKRYNNVQLDGKPMKLEIVGTNIVTPVVPAASNAIASFGNSTGFP-RGGRALGV

Query:  GRSRGGGRGRGPGRGGRGRGR----GRGEKLSAEDLDADLEKYHEEAMQIN
        G+ RGGGRG G GRGG GRGR    G  EK+SAEDLDADL+KYH   M+ N
Subjt:  GRSRGGGRGRGPGRGGRGRGR----GRGEKLSAEDLDADLEKYHEEAMQIN

AT5G59950.5 RNA-binding (RRM/RBD/RNP motifs) family protein1.7e-6559.52Show/hide
Query:  MAEPLDMSLDDIIKNNRKSGSGNSSFRGRGGAPGPGPSRRFR-SRGLNRAAPYSTPKAPEAAWSHHMFVDHGAAYPSQPPRASA-IQTGTKLYVSNLDYG
        M+  LDMSLDD+I  NRKS  G    RG G   GPGP+RR   +R   R+APY + KAPE+ W H MF D    + S   R+SA I+TGTKLY+SNLDYG
Subjt:  MAEPLDMSLDDIIKNNRKSGSGNSSFRGRGGAPGPGPSRRFR-SRGLNRAAPYSTPKAPEAAWSHHMFVDHGAAYPSQPPRASA-IQTGTKLYVSNLDYG

Query:  VSNEDIKELFSEVGDLKRYSINYDKSGRSKGTAEVVFSKQSDAIAAIKRYNNVQLDGKPMKLEIVGTNIVTPVVPAASNAIASFGNSTGFP--RGGRALG
        V NEDIKELF+EVG+LKRY++++D+SGRSKGTAEVV+S++ DA+AA+K+YN+VQLDGKPMK+EIVGTN+ T   P+   A    GNS G P  RGG+  G
Subjt:  VSNEDIKELFSEVGDLKRYSINYDKSGRSKGTAEVVFSKQSDAIAAIKRYNNVQLDGKPMKLEIVGTNIVTPVVPAASNAIASFGNSTGFP--RGGRALG

Query:  VGRSRGGGRGRGPGRGGRGRGR----GRGEKLSAEDLDADLEKYHEEAMQIN
         G+ RGGGRG G GRGG GRGR    G  EK+SAEDLDADL+KYH   M+ N
Subjt:  VGRSRGGGRGRGPGRGGRGRGR----GRGEKLSAEDLDADLEKYHEEAMQIN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGAGCCTCTTGACATGAGCTTAGATGACATCATCAAGAACAACAGGAAATCCGGATCCGGAAACTCCAGCTTCAGGGGTCGCGGCGGAGCTCCCGGACCGGGCCC
CTCTCGCCGATTCCGCAGCCGTGGTCTTAATAGAGCAGCGCCGTATTCTACTCCCAAGGCGCCCGAGGCGGCTTGGTCACACCACATGTTTGTAGATCATGGGGCGGCGT
ATCCTTCGCAGCCACCGCGGGCCTCTGCTATCCAAACTGGGACCAAGCTTTATGTATCTAATTTGGACTATGGTGTCTCCAACGAGGATATCAAGGAACTGTTTTCTGAA
GTTGGCGATCTGAAACGGTATTCTATTAATTATGATAAAAGTGGGAGATCAAAGGGAACAGCGGAAGTAGTTTTTTCGAAACAATCAGATGCTATAGCTGCTATAAAGAG
ATACAACAATGTTCAGCTAGATGGGAAACCCATGAAGTTGGAGATTGTGGGAACAAACATCGTGACACCTGTTGTACCTGCTGCTTCAAATGCCATTGCCAGCTTTGGGA
ATTCAACTGGATTTCCAAGAGGAGGACGTGCACTGGGCGTGGGCCGAAGCCGAGGAGGTGGACGAGGTCGTGGTCCTGGGAGAGGTGGTCGTGGACGTGGAAGAGGTCGT
GGTGAAAAGTTATCGGCTGAAGATCTAGATGCTGATTTGGAGAAGTACCATGAAGAAGCAATGCAGATCAATTAA
mRNA sequenceShow/hide mRNA sequence
CATTTAATAAAAATGGCGTCGCCCAGATTTGAACTGGAGACCTTCAGTGTGTTAGACTGACGTGATAACCAACTACACCACGACACCAATTTGATAAATTAATTACCAAT
TTATTTATTTTGTATTTAAACAATCGGCATTTTATCTGCGATTTTGGAAGTTGGCTTCTTCTTCCCCATTGCTCACAGTTTCACGTCCCTTCGTCGAAACCCTAGACTTC
TCTCTCTCTGTGTGTGATCCACGACTCCTCCGCCCAAAAATGGCAGAGCCTCTTGACATGAGCTTAGATGACATCATCAAGAACAACAGGAAATCCGGATCCGGAAACTC
CAGCTTCAGGGGTCGCGGCGGAGCTCCCGGACCGGGCCCCTCTCGCCGATTCCGCAGCCGTGGTCTTAATAGAGCAGCGCCGTATTCTACTCCCAAGGCGCCCGAGGCGG
CTTGGTCACACCACATGTTTGTAGATCATGGGGCGGCGTATCCTTCGCAGCCACCGCGGGCCTCTGCTATCCAAACTGGGACCAAGCTTTATGTATCTAATTTGGACTAT
GGTGTCTCCAACGAGGATATCAAGGAACTGTTTTCTGAAGTTGGCGATCTGAAACGGTATTCTATTAATTATGATAAAAGTGGGAGATCAAAGGGAACAGCGGAAGTAGT
TTTTTCGAAACAATCAGATGCTATAGCTGCTATAAAGAGATACAACAATGTTCAGCTAGATGGGAAACCCATGAAGTTGGAGATTGTGGGAACAAACATCGTGACACCTG
TTGTACCTGCTGCTTCAAATGCCATTGCCAGCTTTGGGAATTCAACTGGATTTCCAAGAGGAGGACGTGCACTGGGCGTGGGCCGAAGCCGAGGAGGTGGACGAGGTCGT
GGTCCTGGGAGAGGTGGTCGTGGACGTGGAAGAGGTCGTGGTGAAAAGTTATCGGCTGAAGATCTAGATGCTGATTTGGAGAAGTACCATGAAGAAGCAATGCAGATCAA
TTAATGCATTTGGGATCATTTTCTGGGGCCTGATATCCCTACCCTCGTTAAGTGCTTGATGATAAATGTGATAAGGACACCCTTTTCTATTTTGCGAGTCATATCATGAA
GCCGTGACCTTGAGAGAACCGTTAAGGGACCTTCATATGATGTGGAGTTTGGGCTTGAATTGTTGTTTGTTGCTGTAGACTATAAAGAGTTGAACCGGAACTGGGAAAGT
CGTCCACACTCCTCGTCCACATGGAAGGATTTGGCGCATGACTTGGAAGTATTGATTCTAACATAATCAACCACATCGCCTGGTGTCTGAGGCCAAACTTTTCTGTGATT
GGTTTTATGAATTAAAAGTAATGAGTTAGATCTTCTACTTATTGGCATGGAGGGAGGGGTGTGGAGATGATTACCAAGTAAGTGTTCAGGACTTGGCAATGAATTTTGAG
TCCCCTGAACCATAGGATTTGAAATGCCATGCAGTTAGAAATTTACCTTTCTTTCAGCATTGTGTATGGCTTTTACTTTTCTGTGGTTGCAGTATAACCATTGTAGGGCT
GCAGCCTGGTTTTTGCATATTTTGTTTGAGAACGCTCCATACCGTTGCATTAAAAACGAGAAAGCAAGGCATACACCATTCAATATTTTTGGCGTTCTATAATTTTGGAT
TTGTTTTATGTTCTCCATATTAATTTTAGTTTCTAAATCTTAAGGAAGCCAAAAGACTAGAGGAAAAATGCTACTGTCATTGGACTCCAAGAGGAGAAATTCGGTTGCAG
TTGGTCGTCGGATGCTGATATCTAATATATATTTTTACATGATTGGCCCTTTTCACTTCTGTTTAAAGTTTTCTGAGATTCAAATTTGGTTTGTTCACATTTGATGAATT
GAAAGCTTGTCTGCAATTGATTCACTAAGTCAAACATAGGGGTAAAAATGTTTACCCCTAACCTTTTGCAATAGATTTTGACAGAAAGCAGAGTAAGGTGAAAATAACAG
TAGCAAAAACATGCTTTGAGTTTGAATTCGATTGATGGTGGTGCAGTTGGGTAATTGCAGCTGTGAAGGGATTCTATTAAAGTTTTTGAAATGCTTACAAGTGCTTTTTG
TATCTCTTACAGATTGTTTTAGTGGCTGTTAAGTCTGGTTTTTATAATTCATGCCTAGTGAGTTTCTTAGAGGAGATTTTAGTATTTGTTCTACAAGTGTTCAAAGTTCA
CTAATATTTTGATTAGTTGGGCATTTTGATAGTAATTAATTTTCGAATTTAAGTGTTGTGGTTGGTTGTAAAGCTGTAAATTACAATCCTAGCAATTTCTTAATATTGTT
ATGTGTTGCATTCTTGCATTACTTTTTTGTAGTTATCAATTTGATGAAGATGAACTTATAAATGTGATCAATGCAAATGTTTAATATGATGCAAAATTTTGTTTTGTTTC
TAATGCTGTTTTGAGTGACC
Protein sequenceShow/hide protein sequence
MAEPLDMSLDDIIKNNRKSGSGNSSFRGRGGAPGPGPSRRFRSRGLNRAAPYSTPKAPEAAWSHHMFVDHGAAYPSQPPRASAIQTGTKLYVSNLDYGVSNEDIKELFSE
VGDLKRYSINYDKSGRSKGTAEVVFSKQSDAIAAIKRYNNVQLDGKPMKLEIVGTNIVTPVVPAASNAIASFGNSTGFPRGGRALGVGRSRGGGRGRGPGRGGRGRGRGR
GEKLSAEDLDADLEKYHEEAMQIN