CuGenDBv2

Gene ID	MC03g0259
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	30S ribosomal protein S3, chloroplastic
Genome location	MC03:7663518..7663723
RNA-Seq Expression	MC03g0259
Synteny	MC03g0259
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0005840 - ribosome (cellular component) GO:0009507 - chloroplast (cellular component) GO:0003735 - structural constituent of ribosome (molecular function) GO:0019843 - rRNA binding (molecular function)
InterPro domains	IPR009019 - K homology domain superfamily, prokaryotic type

Homology

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GenBank top hits

e value

%identity

Alignment

YP_009456099.1 ribosomal protein S3 [Momordica charantia]

2.16e-34

95.65

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Query:  MIFMAFPKLLIEGGSRKIEELQMNV-KELNCVNRKLNIAITRIANPYGHPNILAEFIAGQLLKNRVSFR
        +IFMAFPKLLIEGGSRKIEELQMNV KELNCVNRKLNIAITRIANPYGHPNILAEFIAGQL KNRVSFR
Subjt:  MIFMAFPKLLIEGGSRKIEELQMNV-KELNCVNRKLNIAITRIANPYGHPNILAEFIAGQLLKNRVSFR

YP_009751860.1 ribosomal protein S3 [Indofevillea khasiana]

3.48e-33

92.75

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Query:  MIFMAFPKLLIEGGSRKIEELQMNV-KELNCVNRKLNIAITRIANPYGHPNILAEFIAGQLLKNRVSFR
        +IFM FPKLLIEGGSRKIEELQMNV KELNCVNRKLNIAITRI NPYGHPNILAEFIAGQL KNRVSFR
Subjt:  MIFMAFPKLLIEGGSRKIEELQMNV-KELNCVNRKLNIAITRIANPYGHPNILAEFIAGQLLKNRVSFR

YP_009752365.1 ribosomal protein S3 [Bryonia marmorata]

3.48e-33

92.75

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Query:  MIFMAFPKLLIEGGSRKIEELQMNV-KELNCVNRKLNIAITRIANPYGHPNILAEFIAGQLLKNRVSFR
        +IFM FPKLLIEGGSRKIEELQMNV KELNCVNRKLNIAITRI NPYGHPNILAEFIAGQL KNRVSFR
Subjt:  MIFMAFPKLLIEGGSRKIEELQMNV-KELNCVNRKLNIAITRIANPYGHPNILAEFIAGQLLKNRVSFR

YP_009752704.1 ribosomal protein S3 [Ampelosycios humblotii]

3.48e-33

92.75

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Query:  MIFMAFPKLLIEGGSRKIEELQMNV-KELNCVNRKLNIAITRIANPYGHPNILAEFIAGQLLKNRVSFR
        +IFM FPKLLIEGGSRKIEELQMNV KELNCVNRKLNIAITRI NPYGHPNILAEFIAGQL KNRVSFR
Subjt:  MIFMAFPKLLIEGGSRKIEELQMNV-KELNCVNRKLNIAITRIANPYGHPNILAEFIAGQLLKNRVSFR

YP_009752873.1 ribosomal protein S3 [Baijiania yunnanensis]

3.48e-33

92.75

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Query:  MIFMAFPKLLIEGGSRKIEELQMNV-KELNCVNRKLNIAITRIANPYGHPNILAEFIAGQLLKNRVSFR
        +IFM FPKLLIEGGSRKIEELQMNV KELNCVNRKLNIAITRI NPYGHPNILAEFIAGQL KNRVSFR
Subjt:  MIFMAFPKLLIEGGSRKIEELQMNV-KELNCVNRKLNIAITRIANPYGHPNILAEFIAGQLLKNRVSFR

TrEMBL top hits

e value

%identity

Alignment

A0A2I6C046 30S ribosomal protein S3, chloroplastic

1.05e-34

95.65

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Query:  MIFMAFPKLLIEGGSRKIEELQMNV-KELNCVNRKLNIAITRIANPYGHPNILAEFIAGQLLKNRVSFR
        +IFMAFPKLLIEGGSRKIEELQMNV KELNCVNRKLNIAITRIANPYGHPNILAEFIAGQL KNRVSFR
Subjt:  MIFMAFPKLLIEGGSRKIEELQMNV-KELNCVNRKLNIAITRIANPYGHPNILAEFIAGQLLKNRVSFR

A0A6H0ERM9 30S ribosomal protein S3, chloroplastic

1.69e-33

92.75

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Query:  MIFMAFPKLLIEGGSRKIEELQMNV-KELNCVNRKLNIAITRIANPYGHPNILAEFIAGQLLKNRVSFR
        +IFM FPKLLIEGGSRKIEELQMNV KELNCVNRKLNIAITRI NPYGHPNILAEFIAGQL KNRVSFR
Subjt:  MIFMAFPKLLIEGGSRKIEELQMNV-KELNCVNRKLNIAITRIANPYGHPNILAEFIAGQLLKNRVSFR

A0A6H0ES22 30S ribosomal protein S3, chloroplastic

1.69e-33

92.75

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Query:  MIFMAFPKLLIEGGSRKIEELQMNV-KELNCVNRKLNIAITRIANPYGHPNILAEFIAGQLLKNRVSFR
        +IFM FPKLLIEGGSRKIEELQMNV KELNCVNRKLNIAITRI NPYGHPNILAEFIAGQL KNRVSFR
Subjt:  MIFMAFPKLLIEGGSRKIEELQMNV-KELNCVNRKLNIAITRIANPYGHPNILAEFIAGQLLKNRVSFR

A0A6H0ETK4 30S ribosomal protein S3, chloroplastic

1.69e-33

92.75

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Query:  MIFMAFPKLLIEGGSRKIEELQMNV-KELNCVNRKLNIAITRIANPYGHPNILAEFIAGQLLKNRVSFR
        +IFM FPKLLIEGGSRKIEELQMNV KELNCVNRKLNIAITRI NPYGHPNILAEFIAGQL KNRVSFR
Subjt:  MIFMAFPKLLIEGGSRKIEELQMNV-KELNCVNRKLNIAITRIANPYGHPNILAEFIAGQLLKNRVSFR

A0A6H0EVT0 30S ribosomal protein S3, chloroplastic

1.69e-33

92.75

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Query:  MIFMAFPKLLIEGGSRKIEELQMNV-KELNCVNRKLNIAITRIANPYGHPNILAEFIAGQLLKNRVSFR
        +IFM FPKLLIEGGSRKIEELQMNV KELNCVNRKLNIAITRI NPYGHPNILAEFIAGQL KNRVSFR
Subjt:  MIFMAFPKLLIEGGSRKIEELQMNV-KELNCVNRKLNIAITRIANPYGHPNILAEFIAGQLLKNRVSFR

SwissProt top hits

e value

%identity

Alignment

A0ZZ73 30S ribosomal protein S3, chloroplastic

3.3e-24

84.06

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Query:  MIFMAFPKLLIEGGSRKIEELQMNV-KELNCVNRKLNIAITRIANPYGHPNILAEFIAGQLLKNRVSFR
        +I+M FPKLLIE   RK+EELQMNV KELNC+NRKLNIAITRI NPYGHPNILAEFIAGQ LKNRVSFR
Subjt:  MIFMAFPKLLIEGGSRKIEELQMNV-KELNCVNRKLNIAITRIANPYGHPNILAEFIAGQLLKNRVSFR

A4QJF3 30S ribosomal protein S3, chloroplastic

9.6e-24

82.61

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Query:  MIFMAFPKLLIEGGSRKIEELQMNV-KELNCVNRKLNIAITRIANPYGHPNILAEFIAGQLLKNRVSFR
        +I+M FPKLLIE   R++EELQMNV KELNCVNRKLNIAITRI+ PYGHPNILAEFIAGQ LKNRVSFR
Subjt:  MIFMAFPKLLIEGGSRKIEELQMNV-KELNCVNRKLNIAITRIANPYGHPNILAEFIAGQLLKNRVSFR

A4QL57 30S ribosomal protein S3, chloroplastic

4.3e-24

84.06

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Query:  MIFMAFPKLLIEGGSRKIEELQMNV-KELNCVNRKLNIAITRIANPYGHPNILAEFIAGQLLKNRVSFR
        +I+M FPKLLIE   R+IEELQ+NV KELNCVNRKLNIAITRI+NPYGHPNILAEFIAGQ LKNRVSFR
Subjt:  MIFMAFPKLLIEGGSRKIEELQMNV-KELNCVNRKLNIAITRIANPYGHPNILAEFIAGQLLKNRVSFR

Q2L946 30S ribosomal protein S3, chloroplastic

3.3e-24

84.06

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Query:  MIFMAFPKLLIEGGSRKIEELQMNV-KELNCVNRKLNIAITRIANPYGHPNILAEFIAGQLLKNRVSFR
        +I+M FPKLLIE   RK+EELQMNV KELNC+NRKLNIAITRI NPYGHPNILAEFIAGQ LKNRVSFR
Subjt:  MIFMAFPKLLIEGGSRKIEELQMNV-KELNCVNRKLNIAITRIANPYGHPNILAEFIAGQLLKNRVSFR

Q49KW0 30S ribosomal protein S3, chloroplastic

3.0e-25

85.51

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Query:  MIFMAFPKLLIEGGSRKIEELQMNV-KELNCVNRKLNIAITRIANPYGHPNILAEFIAGQLLKNRVSFR
        +I+M FPKLL+EG +R+IEELQMNV KELNCVNRKLNIAITRI NPYGHPNILAEFIAGQ LKNRVSFR
Subjt:  MIFMAFPKLLIEGGSRKIEELQMNV-KELNCVNRKLNIAITRIANPYGHPNILAEFIAGQLLKNRVSFR

Arabidopsis top hits

e value

%identity

Alignment

ATCG00800.1 structural constituent of ribosome

1.5e-24

82.61

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Query:  MIFMAFPKLLIEGGSRKIEELQMNV-KELNCVNRKLNIAITRIANPYGHPNILAEFIAGQLLKNRVSFR
        +I+M FPKLLIE   R++EELQMNV KELNCVNRKLNIAITRI+NPYG PNILAEFIAGQ LKNRVSFR
Subjt:  MIFMAFPKLLIEGGSRKIEELQMNV-KELNCVNRKLNIAITRIANPYGHPNILAEFIAGQLLKNRVSFR

Sequences

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CDS sequence

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ATGATTTTTATGGCATTCCCAAAATTATTAATAGAAGGTGGGTCGCGCAAAATCGAAGAATTACAGATGAATGTAAAAGAATTAAATTGTGTGAACCGAAAACTCAACAT
TGCTATTACAAGAATAGCAAACCCTTATGGACACCCTAATATTCTTGCAGAATTTATAGCCGGACAATTATTAAAGAATAGAGTTTCATTTCGC

mRNA sequence

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Protein sequence

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MIFMAFPKLLIEGGSRKIEELQMNVKELNCVNRKLNIAITRIANPYGHPNILAEFIAGQLLKNRVSFR

MC03g0259 (gene) of Bitter gourd (Dali-11) v1 genome