; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC03g0260 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC03g0260
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionYrdC-like domain-containing protein
Genome locationMC03:7726684..7732870
RNA-Seq ExpressionMC03g0260
SyntenyMC03g0260
Gene Ontology termsGO:0006351 - transcription, DNA-templated (biological process)
GO:0006450 - regulation of translational fidelity (biological process)
GO:0005666 - RNA polymerase III complex (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0000049 - tRNA binding (molecular function)
GO:0003677 - DNA binding (molecular function)
GO:0003725 - double-stranded RNA binding (molecular function)
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR006070 - YrdC-like domain
IPR017945 - DHBP synthase RibB-like alpha/beta domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607198.1 YrdC domain-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]3.90e-16384.53Show/hide
Query:  MSTLSVKMVESFSLFRTFATFPSSQRGVPNYGLVPFLHQNRGSRVSFSKMTWSLEKCRTRVDNSLQAICPASEAFAQAAVEALKAGKVIAVPTDTLYGLA
        M+TL  KMVE  S+ RTFATFPSSQ G P+YG V FLH NRGSR++F K  WSLEKC  RV+NSLQA+ PASEAFAQ A+EALKAGKVIAVPTDTLYGLA
Subjt:  MSTLSVKMVESFSLFRTFATFPSSQRGVPNYGLVPFLHQNRGSRVSFSKMTWSLEKCRTRVDNSLQAICPASEAFAQAAVEALKAGKVIAVPTDTLYGLA

Query:  CDACSLEAVNRIYEIKGRKLTSPLAICVGDVADITRFAVIDHLPPGLLDSLLPGPVTVVLKRGESSTLEKSLNPGLDSVGVRVPDYDFIRLISRKSKTAL
        CDACS EAVNRIYEIKGRKLTSPLAICVGDV+DITRFAV DHLP GLLDSLLPGPVTVVLKRGESS LEKSLNPGL+S+GVRVPD DFIRLISR+S TAL
Subjt:  CDACSLEAVNRIYEIKGRKLTSPLAICVGDVADITRFAVIDHLPPGLLDSLLPGPVTVVLKRGESSTLEKSLNPGLDSVGVRVPDYDFIRLISRKSKTAL

Query:  ALTSANLSGQPSSVCINDFESIWPHCAYVYDGGVLPAGRAGSTIIDLTKKGTFKIIRAGSAKDLTVATLERYSLLEEA
        ALTSANLSGQPSSV +NDFE++W HCAYVYDGGVLPAGRAGSTIIDLTK+GTFKIIRAGSAK+ TVATLERYSLLEEA
Subjt:  ALTSANLSGQPSSVCINDFESIWPHCAYVYDGGVLPAGRAGSTIIDLTKKGTFKIIRAGSAKDLTVATLERYSLLEEA

XP_022156689.1 yrdC domain-containing protein, mitochondrial [Momordica charantia]1.14e-197100Show/hide
Query:  MMSTLSVKMVESFSLFRTFATFPSSQRGVPNYGLVPFLHQNRGSRVSFSKMTWSLEKCRTRVDNSLQAICPASEAFAQAAVEALKAGKVIAVPTDTLYGL
        MMSTLSVKMVESFSLFRTFATFPSSQRGVPNYGLVPFLHQNRGSRVSFSKMTWSLEKCRTRVDNSLQAICPASEAFAQAAVEALKAGKVIAVPTDTLYGL
Subjt:  MMSTLSVKMVESFSLFRTFATFPSSQRGVPNYGLVPFLHQNRGSRVSFSKMTWSLEKCRTRVDNSLQAICPASEAFAQAAVEALKAGKVIAVPTDTLYGL

Query:  ACDACSLEAVNRIYEIKGRKLTSPLAICVGDVADITRFAVIDHLPPGLLDSLLPGPVTVVLKRGESSTLEKSLNPGLDSVGVRVPDYDFIRLISRKSKTA
        ACDACSLEAVNRIYEIKGRKLTSPLAICVGDVADITRFAVIDHLPPGLLDSLLPGPVTVVLKRGESSTLEKSLNPGLDSVGVRVPDYDFIRLISRKSKTA
Subjt:  ACDACSLEAVNRIYEIKGRKLTSPLAICVGDVADITRFAVIDHLPPGLLDSLLPGPVTVVLKRGESSTLEKSLNPGLDSVGVRVPDYDFIRLISRKSKTA

Query:  LALTSANLSGQPSSVCINDFESIWPHCAYVYDGGVLPAGRAGSTIIDLTKKGTFKIIRAGSAKDLTVATLERYSLLEEAAN
        LALTSANLSGQPSSVCINDFESIWPHCAYVYDGGVLPAGRAGSTIIDLTKKGTFKIIRAGSAKDLTVATLERYSLLEEAAN
Subjt:  LALTSANLSGQPSSVCINDFESIWPHCAYVYDGGVLPAGRAGSTIIDLTKKGTFKIIRAGSAKDLTVATLERYSLLEEAAN

XP_022948702.1 yrdC domain-containing protein, mitochondrial [Cucurbita moschata]6.75e-16484.17Show/hide
Query:  MSTLSVKMVESFSLFRTFATFPSSQRGVPNYGLVPFLHQNRGSRVSFSKMTWSLEKCRTRVDNSLQAICPASEAFAQAAVEALKAGKVIAVPTDTLYGLA
        M+TL  KMVE  S+ RTFATFPSSQ G P+YG V FLH NRGSR++F K  WSLEKC  RV+NSLQA+ PASEAFAQ A+EALKAGKVIAVPTDTLYGLA
Subjt:  MSTLSVKMVESFSLFRTFATFPSSQRGVPNYGLVPFLHQNRGSRVSFSKMTWSLEKCRTRVDNSLQAICPASEAFAQAAVEALKAGKVIAVPTDTLYGLA

Query:  CDACSLEAVNRIYEIKGRKLTSPLAICVGDVADITRFAVIDHLPPGLLDSLLPGPVTVVLKRGESSTLEKSLNPGLDSVGVRVPDYDFIRLISRKSKTAL
        CDACS EAVNRIYEIKGRKLTSPLAICVGDV+DITRFAV DHLP GLLDSLLPGPVTVVLKRGESS LEKSLNPGL+S+GVRVPD DFIRLISR+S TAL
Subjt:  CDACSLEAVNRIYEIKGRKLTSPLAICVGDVADITRFAVIDHLPPGLLDSLLPGPVTVVLKRGESSTLEKSLNPGLDSVGVRVPDYDFIRLISRKSKTAL

Query:  ALTSANLSGQPSSVCINDFESIWPHCAYVYDGGVLPAGRAGSTIIDLTKKGTFKIIRAGSAKDLTVATLERYSLLEEA
        ALTSANLSGQPSSVC++DFE++W HCAYVYDGG+LPAGRAGSTIIDLTK+GTFKIIRAGSAK+ TVATLERYSLLEEA
Subjt:  ALTSANLSGQPSSVCINDFESIWPHCAYVYDGGVLPAGRAGSTIIDLTKKGTFKIIRAGSAKDLTVATLERYSLLEEA

XP_022998259.1 yrdC domain-containing protein, mitochondrial [Cucurbita maxima]2.75e-16384.53Show/hide
Query:  MSTLSVKMVESFSLFRTFATFPSSQRGVPNYGLVPFLHQNRGSRVSFSKMTWSLEKCRTRVDNSLQAICPASEAFAQAAVEALKAGKVIAVPTDTLYGLA
        M+T   KMVE  SL RTFATFPSSQ G PNYG V FLH NRGSR++F K  WSLEKC  RV+NSLQA+ PASEAFAQ A EALKAGKVIAVPTDTLYGLA
Subjt:  MSTLSVKMVESFSLFRTFATFPSSQRGVPNYGLVPFLHQNRGSRVSFSKMTWSLEKCRTRVDNSLQAICPASEAFAQAAVEALKAGKVIAVPTDTLYGLA

Query:  CDACSLEAVNRIYEIKGRKLTSPLAICVGDVADITRFAVIDHLPPGLLDSLLPGPVTVVLKRGESSTLEKSLNPGLDSVGVRVPDYDFIRLISRKSKTAL
        CDACS EAVNRIYEIKGRKLTSPLAICVGDV+DITRFAV DHLP GLLDSLLPGPVTVVLKRGESS LEKSLNPGL+S+GVRVPD DFIRLISR+S TAL
Subjt:  CDACSLEAVNRIYEIKGRKLTSPLAICVGDVADITRFAVIDHLPPGLLDSLLPGPVTVVLKRGESSTLEKSLNPGLDSVGVRVPDYDFIRLISRKSKTAL

Query:  ALTSANLSGQPSSVCINDFESIWPHCAYVYDGGVLPAGRAGSTIIDLTKKGTFKIIRAGSAKDLTVATLERYSLLEEA
        ALTSANLSG+PSSVC+NDFE++W HCAYVYDGGVLPAGRAGSTIIDLTK+G FKIIRAGSAK+ TVATLERYSLLEEA
Subjt:  ALTSANLSGQPSSVCINDFESIWPHCAYVYDGGVLPAGRAGSTIIDLTKKGTFKIIRAGSAKDLTVATLERYSLLEEA

XP_023521571.1 yrdC domain-containing protein, mitochondrial-like [Cucurbita pepo subsp. pepo]2.36e-16484.89Show/hide
Query:  MSTLSVKMVESFSLFRTFATFPSSQRGVPNYGLVPFLHQNRGSRVSFSKMTWSLEKCRTRVDNSLQAICPASEAFAQAAVEALKAGKVIAVPTDTLYGLA
        M+TL  KMVE  SL RTFATFPSSQ G PNYG V FLH NRGSR++F K  WSLEKC  RV+NSLQA+ PASEAFAQ A EALKAGKVIAVPTDTLYGLA
Subjt:  MSTLSVKMVESFSLFRTFATFPSSQRGVPNYGLVPFLHQNRGSRVSFSKMTWSLEKCRTRVDNSLQAICPASEAFAQAAVEALKAGKVIAVPTDTLYGLA

Query:  CDACSLEAVNRIYEIKGRKLTSPLAICVGDVADITRFAVIDHLPPGLLDSLLPGPVTVVLKRGESSTLEKSLNPGLDSVGVRVPDYDFIRLISRKSKTAL
        CDACS EAVNRIYEIKGRKLTSPLAICVGDV+DITRFAV DHLP GLLDSLLPGPVTVVLKRGESS LEKSLNPGL+S+GVRVPD DFIRLISR+S TAL
Subjt:  CDACSLEAVNRIYEIKGRKLTSPLAICVGDVADITRFAVIDHLPPGLLDSLLPGPVTVVLKRGESSTLEKSLNPGLDSVGVRVPDYDFIRLISRKSKTAL

Query:  ALTSANLSGQPSSVCINDFESIWPHCAYVYDGGVLPAGRAGSTIIDLTKKGTFKIIRAGSAKDLTVATLERYSLLEEA
        ALTSANLSGQPSSVC+NDFE++W HCAYVYDGGVLPAGRAGSTIIDLTK+GTFKIIRAGSAK+ TVATL+RYSLLE+A
Subjt:  ALTSANLSGQPSSVCINDFESIWPHCAYVYDGGVLPAGRAGSTIIDLTKKGTFKIIRAGSAKDLTVATLERYSLLEEA

TrEMBL top hitse value%identityAlignment
A0A0A0LUP4 YrdC-like domain-containing protein3.41e-16082.44Show/hide
Query:  MSTLSVKMVESFSLFRTFATFPSSQRGVPNYGLVPFLHQNRGSRVSFSKMTWSLEKCRTRVDNSLQAICPASEAFAQAAVEALKAGKVIAVPTDTLYGLA
        M+TL  KM +S SL RTF TFPSSQ G  NYG+V FL +NRGSRVSF K  WSLEKC  RV+N LQA+ PASEAFAQ A +ALKAGKVIAVPTDTLYGLA
Subjt:  MSTLSVKMVESFSLFRTFATFPSSQRGVPNYGLVPFLHQNRGSRVSFSKMTWSLEKCRTRVDNSLQAICPASEAFAQAAVEALKAGKVIAVPTDTLYGLA

Query:  CDACSLEAVNRIYEIKGRKLTSPLAICVGDVADITRFAVIDHLPPGLLDSLLPGPVTVVLKRGESSTLEKSLNPGLDSVGVRVPDYDFIRLISRKSKTAL
        CDACS EAV+RIYEIKGRKLTSPLAICVGDV+DITRFAV DHLP GLLDSLLPGPVTVVLKRGESS L+KSLNPGLDS+GVRVPD DFIRLISR+S+TAL
Subjt:  CDACSLEAVNRIYEIKGRKLTSPLAICVGDVADITRFAVIDHLPPGLLDSLLPGPVTVVLKRGESSTLEKSLNPGLDSVGVRVPDYDFIRLISRKSKTAL

Query:  ALTSANLSGQPSSVCINDFESIWPHCAYVYDGGVLPAGRAGSTIIDLTKKGTFKIIRAGSAKDLTVATLERYSLLEEAA
        ALTSANLSGQPSSVC+NDFE++W HCAYVYDGGVLPAGRAGSTIIDLT++GTFKIIRAGSA++ T+ATLERYSLLE AA
Subjt:  ALTSANLSGQPSSVCINDFESIWPHCAYVYDGGVLPAGRAGSTIIDLTKKGTFKIIRAGSAKDLTVATLERYSLLEEAA

A0A5A7T5W1 YrdC domain-containing protein3.11e-15680.29Show/hide
Query:  MSTLSVKMVESFSLFRTFATFPSSQRGVPNYGLVPFLHQNRGSRVSFSKMTWSLEKCRTRVDNSLQAICPASEAFAQAAVEALKAGKVIAVPTDTLYGLA
        M+TL  KM +S SL RTFATFPSS  G  NYG+V FL +NRGSRVSF K  WSLEKC   V+N LQA+ PASEAFAQ A +ALKAGKVIAVPTDTLYGLA
Subjt:  MSTLSVKMVESFSLFRTFATFPSSQRGVPNYGLVPFLHQNRGSRVSFSKMTWSLEKCRTRVDNSLQAICPASEAFAQAAVEALKAGKVIAVPTDTLYGLA

Query:  CDACSLEAVNRIYEIKGRKLTSPLAICVGDVADITRFAVIDHLPPGLLDSLLPGPVTVVLKRGESSTLEKSLNPGLDSVGVRVPDYDFIRLISRKSKTAL
        CDACS EAV+RIYEIKGRKLTSPLAICVG V+DITR+A+ DHLP GLLDSLLPGPVTVVLKRGESS L+KSLNPGLDS+GVRVPD DFIRLISR+S+TAL
Subjt:  CDACSLEAVNRIYEIKGRKLTSPLAICVGDVADITRFAVIDHLPPGLLDSLLPGPVTVVLKRGESSTLEKSLNPGLDSVGVRVPDYDFIRLISRKSKTAL

Query:  ALTSANLSGQPSSVCINDFESIWPHCAYVYDGGVLPAGRAGSTIIDLTKKGTFKIIRAGSAKDLTVATLERYSLLEEAA
        ALTSANLSGQPSSVC+NDFE++W HCAYVYDGGVLPAGRAGSTI+DLT++GTFKIIRAGSA+  T+ATL+RYSLLE AA
Subjt:  ALTSANLSGQPSSVCINDFESIWPHCAYVYDGGVLPAGRAGSTIIDLTKKGTFKIIRAGSAKDLTVATLERYSLLEEAA

A0A6J1DUA4 yrdC domain-containing protein, mitochondrial5.51e-198100Show/hide
Query:  MMSTLSVKMVESFSLFRTFATFPSSQRGVPNYGLVPFLHQNRGSRVSFSKMTWSLEKCRTRVDNSLQAICPASEAFAQAAVEALKAGKVIAVPTDTLYGL
        MMSTLSVKMVESFSLFRTFATFPSSQRGVPNYGLVPFLHQNRGSRVSFSKMTWSLEKCRTRVDNSLQAICPASEAFAQAAVEALKAGKVIAVPTDTLYGL
Subjt:  MMSTLSVKMVESFSLFRTFATFPSSQRGVPNYGLVPFLHQNRGSRVSFSKMTWSLEKCRTRVDNSLQAICPASEAFAQAAVEALKAGKVIAVPTDTLYGL

Query:  ACDACSLEAVNRIYEIKGRKLTSPLAICVGDVADITRFAVIDHLPPGLLDSLLPGPVTVVLKRGESSTLEKSLNPGLDSVGVRVPDYDFIRLISRKSKTA
        ACDACSLEAVNRIYEIKGRKLTSPLAICVGDVADITRFAVIDHLPPGLLDSLLPGPVTVVLKRGESSTLEKSLNPGLDSVGVRVPDYDFIRLISRKSKTA
Subjt:  ACDACSLEAVNRIYEIKGRKLTSPLAICVGDVADITRFAVIDHLPPGLLDSLLPGPVTVVLKRGESSTLEKSLNPGLDSVGVRVPDYDFIRLISRKSKTA

Query:  LALTSANLSGQPSSVCINDFESIWPHCAYVYDGGVLPAGRAGSTIIDLTKKGTFKIIRAGSAKDLTVATLERYSLLEEAAN
        LALTSANLSGQPSSVCINDFESIWPHCAYVYDGGVLPAGRAGSTIIDLTKKGTFKIIRAGSAKDLTVATLERYSLLEEAAN
Subjt:  LALTSANLSGQPSSVCINDFESIWPHCAYVYDGGVLPAGRAGSTIIDLTKKGTFKIIRAGSAKDLTVATLERYSLLEEAAN

A0A6J1G9Z7 yrdC domain-containing protein, mitochondrial3.27e-16484.17Show/hide
Query:  MSTLSVKMVESFSLFRTFATFPSSQRGVPNYGLVPFLHQNRGSRVSFSKMTWSLEKCRTRVDNSLQAICPASEAFAQAAVEALKAGKVIAVPTDTLYGLA
        M+TL  KMVE  S+ RTFATFPSSQ G P+YG V FLH NRGSR++F K  WSLEKC  RV+NSLQA+ PASEAFAQ A+EALKAGKVIAVPTDTLYGLA
Subjt:  MSTLSVKMVESFSLFRTFATFPSSQRGVPNYGLVPFLHQNRGSRVSFSKMTWSLEKCRTRVDNSLQAICPASEAFAQAAVEALKAGKVIAVPTDTLYGLA

Query:  CDACSLEAVNRIYEIKGRKLTSPLAICVGDVADITRFAVIDHLPPGLLDSLLPGPVTVVLKRGESSTLEKSLNPGLDSVGVRVPDYDFIRLISRKSKTAL
        CDACS EAVNRIYEIKGRKLTSPLAICVGDV+DITRFAV DHLP GLLDSLLPGPVTVVLKRGESS LEKSLNPGL+S+GVRVPD DFIRLISR+S TAL
Subjt:  CDACSLEAVNRIYEIKGRKLTSPLAICVGDVADITRFAVIDHLPPGLLDSLLPGPVTVVLKRGESSTLEKSLNPGLDSVGVRVPDYDFIRLISRKSKTAL

Query:  ALTSANLSGQPSSVCINDFESIWPHCAYVYDGGVLPAGRAGSTIIDLTKKGTFKIIRAGSAKDLTVATLERYSLLEEA
        ALTSANLSGQPSSVC++DFE++W HCAYVYDGG+LPAGRAGSTIIDLTK+GTFKIIRAGSAK+ TVATLERYSLLEEA
Subjt:  ALTSANLSGQPSSVCINDFESIWPHCAYVYDGGVLPAGRAGSTIIDLTKKGTFKIIRAGSAKDLTVATLERYSLLEEA

A0A6J1KDV4 yrdC domain-containing protein, mitochondrial1.33e-16384.53Show/hide
Query:  MSTLSVKMVESFSLFRTFATFPSSQRGVPNYGLVPFLHQNRGSRVSFSKMTWSLEKCRTRVDNSLQAICPASEAFAQAAVEALKAGKVIAVPTDTLYGLA
        M+T   KMVE  SL RTFATFPSSQ G PNYG V FLH NRGSR++F K  WSLEKC  RV+NSLQA+ PASEAFAQ A EALKAGKVIAVPTDTLYGLA
Subjt:  MSTLSVKMVESFSLFRTFATFPSSQRGVPNYGLVPFLHQNRGSRVSFSKMTWSLEKCRTRVDNSLQAICPASEAFAQAAVEALKAGKVIAVPTDTLYGLA

Query:  CDACSLEAVNRIYEIKGRKLTSPLAICVGDVADITRFAVIDHLPPGLLDSLLPGPVTVVLKRGESSTLEKSLNPGLDSVGVRVPDYDFIRLISRKSKTAL
        CDACS EAVNRIYEIKGRKLTSPLAICVGDV+DITRFAV DHLP GLLDSLLPGPVTVVLKRGESS LEKSLNPGL+S+GVRVPD DFIRLISR+S TAL
Subjt:  CDACSLEAVNRIYEIKGRKLTSPLAICVGDVADITRFAVIDHLPPGLLDSLLPGPVTVVLKRGESSTLEKSLNPGLDSVGVRVPDYDFIRLISRKSKTAL

Query:  ALTSANLSGQPSSVCINDFESIWPHCAYVYDGGVLPAGRAGSTIIDLTKKGTFKIIRAGSAKDLTVATLERYSLLEEA
        ALTSANLSG+PSSVC+NDFE++W HCAYVYDGGVLPAGRAGSTIIDLTK+G FKIIRAGSAK+ TVATLERYSLLEEA
Subjt:  ALTSANLSGQPSSVCINDFESIWPHCAYVYDGGVLPAGRAGSTIIDLTKKGTFKIIRAGSAKDLTVATLERYSLLEEA

SwissProt top hitse value%identityAlignment
Q0VC80 YrdC domain-containing protein, mitochondrial7.9e-4849.02Show/hide
Query:  QAAVEALKAGKVIAVPTDTLYGLACDACSLEAVNRIYEIKGRKLTSPLAICVGDVADITRFAVIDHLPPGLLDSLLPGPVTVVLKRGESSTLEKSLNPGL
        +AAV  L+AG V+AVPTDTLYGLAC A   EA+  +Y +KGR  T PLA+C+G VAD+ R+  +  +P GLL  LLPGPVT+V++R E   L K LNP  
Subjt:  QAAVEALKAGKVIAVPTDTLYGLACDACSLEAVNRIYEIKGRKLTSPLAICVGDVADITRFAVIDHLPPGLLDSLLPGPVTVVLKRGESSTLEKSLNPGL

Query:  DSVGVRVPDYDFIRLISRKSKTALALTSANLSGQPSSVCINDFESIWPHCAYVYDGGVL-----PAGRAGSTIIDLTKKGTFKIIRAGSAKDLTVATLER
          VG+R+PD+ F++ +++     LALTSANLS Q SS+ + +F+ +WPH + + DGG +     P  R GST++DL+  G F IIR G A + T A L+ 
Subjt:  DSVGVRVPDYDFIRLISRKSKTALALTSANLSGQPSSVCINDFESIWPHCAYVYDGGVL-----PAGRAGSTIIDLTKKGTFKIIRAGSAKDLTVATLER

Query:  YSLL
        Y LL
Subjt:  YSLL

Q3U5F4 YrdC domain-containing protein, mitochondrial2.4e-4447.32Show/hide
Query:  QAAVEALKAGKVIAVPTDTLYGLACDACSLEAVNRIYEIKGRKLTSPLAICVGDVADITRFAVIDHLPPGLLDSLLPGPVTVVLKRGESSTLEKSLNPGL
        +AAV  L+AG V+AVPTDTLYGLAC A S  A++ +Y +KGR    PLA+C+G VAD+ R+  +  +P  LL+ L PGPVT+V++R E   L K LNP  
Subjt:  QAAVEALKAGKVIAVPTDTLYGLACDACSLEAVNRIYEIKGRKLTSPLAICVGDVADITRFAVIDHLPPGLLDSLLPGPVTVVLKRGESSTLEKSLNPGL

Query:  DSVGVRVPDYDFIRLISRKSKTALALTSANLSGQPSSVCINDFESIWPHCAYVYDGGVL-----PAGRAGSTIIDLTKKGTFKIIRAGSAKDLTVATL-E
          VG+R+PD+ F+  +++     LALTSANLS Q SS+ + +F+ +WPH + V DGG +     P  R GST++DL+  G F IIR G A + T + L +
Subjt:  DSVGVRVPDYDFIRLISRKSKTALALTSANLSGQPSSVCINDFESIWPHCAYVYDGGVL-----PAGRAGSTIIDLTKKGTFKIIRAGSAKDLTVATL-E

Query:  RYSLL
        +Y LL
Subjt:  RYSLL

Q499R4 YrdC domain-containing protein, mitochondrial1.8e-4447.32Show/hide
Query:  QAAVEALKAGKVIAVPTDTLYGLACDACSLEAVNRIYEIKGRKLTSPLAICVGDVADITRFAVIDHLPPGLLDSLLPGPVTVVLKRGESSTLEKSLNPGL
        +AAV  L+AG V+AVPTDTLYGLAC A    A++ +Y +KGR    PLA+C+G VAD+ R+  +  +P  LL+ L PGPVT+V++R E   L K LNP  
Subjt:  QAAVEALKAGKVIAVPTDTLYGLACDACSLEAVNRIYEIKGRKLTSPLAICVGDVADITRFAVIDHLPPGLLDSLLPGPVTVVLKRGESSTLEKSLNPGL

Query:  DSVGVRVPDYDFIRLISRKSKTALALTSANLSGQPSSVCINDFESIWPHCAYVYDGGVL-----PAGRAGSTIIDLTKKGTFKIIRAGSAKDLTVATLE-
          VG+R+PD+ F+  +++     LALTSANLS Q SS+ + +F+ +WPH + V DGG +     P  R GST++DL+  G F IIR+G A + T A L+ 
Subjt:  DSVGVRVPDYDFIRLISRKSKTALALTSANLSGQPSSVCINDFESIWPHCAYVYDGGVL-----PAGRAGSTIIDLTKKGTFKIIRAGSAKDLTVATLE-

Query:  RYSLL
        +Y LL
Subjt:  RYSLL

Q60369 Putative threonylcarbamoyl-AMP synthase5.4e-2032.65Show/hide
Query:  NSLQAICPASEAFAQAAVEALKA----GKVIAVPTDTLYGLACDACSLEAVNRIYEIKGRKLTSPLAICVGDVADITRFAVIDHLPPGLLDSLLPGPVTV
        N +  I   +E   +  +E LK     GK++   TDTLYG++ +A + +AV ++Y IK R+   PL+ICV D  +I ++A ++ L   ++D  LPGP+T+
Subjt:  NSLQAICPASEAFAQAAVEALKA----GKVIAVPTDTLYGLACDACSLEAVNRIYEIKGRKLTSPLAICVGDVADITRFAVIDHLPPGLLDSLLPGPVTV

Query:  VLKRGESSTLEKSLNPGL------DSVGVRVPDYDFIRLISRKSKTALALTSANLSGQPSSVCINDFE-SIWPHCAYVYDGGVLPAGRAGSTIIDL
        +LK+           PG+      D +G+R+PD   IR +   S   L  TSAN+SG+ S   +++ +  +     YV D G     +  STII +
Subjt:  VLKRGESSTLEKSLNPGL------DSVGVRVPDYDFIRLISRKSKTALALTSANLSGQPSSVCINDFE-SIWPHCAYVYDGGVLPAGRAGSTIIDL

Q86U90 YrdC domain-containing protein, mitochondrial8.2e-4545.13Show/hide
Query:  SLQAICPASEAFAQ---AAVEALKAGKVIAVPTDTLYGLACDACSLEAVNRIYEIKGRKLTSPLAICVGDVADITRFAVIDHLPPGLLDSLLPGPVTVVL
        ++QA  P    + +   AAV  L+AG V+AVPTDTLYGLAC A    A+  +Y +KGR    PLA+C+G VAD+ R+  +  +P GLL  LLPGPVT+V+
Subjt:  SLQAICPASEAFAQ---AAVEALKAGKVIAVPTDTLYGLACDACSLEAVNRIYEIKGRKLTSPLAICVGDVADITRFAVIDHLPPGLLDSLLPGPVTVVL

Query:  KRGESSTLEKSLNPGLDSVGVRVPDYDFIRLISRKSKTALALTSANLSGQPSSVCINDFESIWPHCAYVYDGGVL-----PAGRAGSTIIDLTKKGTFKI
        +R E   L K LNP    VG+R+PD+ F++ +++  +  LALTSANLS Q SS+ + +F+ +WP  + V DGG +     P  R GST++DL+  G F I
Subjt:  KRGESSTLEKSLNPGLDSVGVRVPDYDFIRLISRKSKTALALTSANLSGQPSSVCINDFESIWPHCAYVYDGGVL-----PAGRAGSTIIDLTKKGTFKI

Query:  IRAGSAKDLTVATL-ERYSLLEEAAN
        IR G A + T A L ++Y LL   A+
Subjt:  IRAGSAKDLTVATL-ERYSLLEEAAN

Arabidopsis top hitse value%identityAlignment
AT3G01920.1 DHBP synthase RibB-like alpha/beta domain3.0e-1026.6Show/hide
Query:  MSTLSVKMVESFSLFRTFATFPSSQRGVPNYGLVPFLHQNRGSRVSFS--KMTWSLEKCRTRVDNSLQAICPASEAFAQAAVEALKAGKVIAVPTDTLYG
        M+ + + ++ S    R  +T PS+    P   +V    +    R+ +S  + T   E     VD      C       Q  ++ LK G V  +PTDT+Y 
Subjt:  MSTLSVKMVESFSLFRTFATFPSSQRGVPNYGLVPFLHQNRGSRVSFS--KMTWSLEKCRTRVDNSLQAICPASEAFAQAAVEALKAGKVIAVPTDTLYG

Query:  LACDACSLEAVNRIYEIKGRKLTSPLAICVGDVADITRFAVIDHLPPG----------LLDSLLPGPVTVVLKR---------GESSTLEKSLNPGLDSV
        +ACD  +  AV R+  IK  + + PL+I    + DI  F +    P G           +   LPGP T +L           G  +T  K  +    +V
Subjt:  LACDACSLEAVNRIYEIKGRKLTSPLAICVGDVADITRFAVIDHLPPG----------LLDSLLPGPVTVVLKR---------GESSTLEKSLNPGLDSV

Query:  GVRVPDYDFIRLISRKSKTALALTSANLSGQPSSVCINDFESIW-----PHCAYVYDGGVLPAGRAGSTIIDLTKKGTF-KIIRAGSAKDLTVATLE
        GVR+ D    + I ++    L  TS  + G   +  + D  +I          +V DGG+  A    STI+D+T  G + K+IR G    L    +E
Subjt:  GVRVPDYDFIRLISRKSKTALALTSANLSGQPSSVCINDFESIW-----PHCAYVYDGGVLPAGRAGSTIIDLTKKGTF-KIIRAGSAKDLTVATLE

AT5G60590.1 DHBP synthase RibB-like alpha/beta domain3.9e-4257.5Show/hide
Query:  LSVKMVESFSLFRTFATFPSSQRGVPNYGLVPFLHQNRGSRVSF-SKMTWSLEKCRTRVDNSLQAICPASEAFAQAAVEALKAGKVIAVPTDTLYGLACD
        LS ++ E         + P  ++GV         +Q+R  R     KM WSLE+  T V +    + PA+EA+AQ A+EA+K+ KVIAVPTDTLYG ACD
Subjt:  LSVKMVESFSLFRTFATFPSSQRGVPNYGLVPFLHQNRGSRVSF-SKMTWSLEKCRTRVDNSLQAICPASEAFAQAAVEALKAGKVIAVPTDTLYGLACD

Query:  ACSLEAVNRIYEIKGRKLTSPLAICVGDVADITRFAVIDHLPPGLLDSLLPGPVTVVLKR
        ACSLEAV+RIYEIKGRKLTSPLAICVGDV DI R A   HLP GLLDSLLPGPVT+VL+R
Subjt:  ACSLEAVNRIYEIKGRKLTSPLAICVGDVADITRFAVIDHLPPGLLDSLLPGPVTVVLKR

AT5G60590.2 DHBP synthase RibB-like alpha/beta domain4.1e-9263.27Show/hide
Query:  LSVKMVESFSLFRTFATFPSSQRGVPNYGLVPFLHQNRGSRVSF-SKMTWSLEKCRTRVDNSLQAICPASEAFAQAAVEALKAGKVIAVPTDTLYGLACD
        LS ++ E         + P  ++GV         +Q+R  R     KM WSLE+  T V +    + PA+EA+AQ A+EA+K+ KVIAVPTDTLYG ACD
Subjt:  LSVKMVESFSLFRTFATFPSSQRGVPNYGLVPFLHQNRGSRVSF-SKMTWSLEKCRTRVDNSLQAICPASEAFAQAAVEALKAGKVIAVPTDTLYGLACD

Query:  ACSLEAVNRIYEIKGRKLTSPLAICVGDVADITRFAVIDHLPPGLLDSLLPGPVTVVLKRGESSTLEKSLNPGLDSVGVRVPDYDFIRLISRKSKTALAL
        ACSLEAV+RIYEIKGRKLTSPLAICVGDV DI R A   HLP GLLDSLLPGPVT+VL+RGESS LEKSLNPG+ ++GVRVPD +FIR +SR S + LAL
Subjt:  ACSLEAVNRIYEIKGRKLTSPLAICVGDVADITRFAVIDHLPPGLLDSLLPGPVTVVLKRGESSTLEKSLNPGLDSVGVRVPDYDFIRLISRKSKTALAL

Query:  TSANLSGQPSSVCINDFESIWPHCAYVYDGGVLPAGRAGSTIIDLTKKGTFKIIRAGSAKDLTVATLERYSLLEE
        TSANLSG  SSVC+ DFE++W HCAYVYDGG+LP+GRAGSTI+DLTK G +KIIR GSAK  TVA LE+Y L EE
Subjt:  TSANLSGQPSSVCINDFESIWPHCAYVYDGGVLPAGRAGSTIIDLTKKGTFKIIRAGSAKDLTVATLERYSLLEE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGAGCACACTATCGGTGAAAATGGTTGAGTCTTTCTCTCTATTCAGAACCTTTGCAACCTTTCCCTCTTCTCAGCGAGGTGTTCCAAATTATGGGCTTGTTCCATT
CTTGCATCAAAATAGAGGATCAAGGGTGAGTTTTTCTAAAATGACATGGAGTTTGGAAAAATGCAGAACACGTGTGGACAATAGTTTGCAAGCCATTTGCCCTGCCTCTG
AAGCTTTTGCTCAAGCGGCTGTTGAAGCACTTAAAGCTGGAAAGGTGATCGCCGTCCCAACTGATACTCTCTACGGGCTCGCTTGTGATGCTTGTTCTTTGGAGGCAGTC
AATAGGATTTATGAGATTAAAGGACGTAAACTTACGAGTCCTCTCGCCATTTGTGTTGGTGATGTTGCTGACATAACTCGTTTTGCTGTAATAGACCATTTGCCTCCTGG
TTTGCTTGATTCTCTCCTTCCAGGGCCCGTAACTGTTGTACTAAAAAGAGGCGAGTCGAGTACTCTTGAGAAGTCTTTGAACCCTGGATTGGACAGTGTAGGAGTCCGTG
TACCCGACTATGACTTCATTCGGCTTATTTCTCGTAAATCGAAGACAGCCTTGGCCCTTACAAGTGCTAATTTAAGTGGGCAACCAAGTAGTGTCTGTATAAATGATTTC
GAAAGCATATGGCCACACTGTGCTTATGTATATGATGGTGGCGTTCTTCCTGCTGGGCGAGCAGGTTCTACCATTATCGACCTCACCAAGAAGGGGACATTTAAGATTAT
CAGAGCTGGAAGTGCAAAGGATCTGACTGTTGCAACCCTTGAAAGGTATTCCCTGTTGGAAGAAGCAGCTAATTAA
mRNA sequenceShow/hide mRNA sequence
ATCTTTAGGTTTCAAAACCAAATCATTCTCCTAAATTTTGGATTTACACGCTGCCCCCTCCTCCCCAGCCCCACCCTCTCGCCTGCGACTCCCTGTGCGACGGCGAACGG
CGAACGGCGGCGCAAACCCCTACGGCGAGGCATCCCCTGCAGCGGCGGCTCAGCAACAACAGACTGGCAGCGCGTTCCTCTCTGTGAAGGAGTCATCACCCGCAGTAGAC
TTCTTCCACCGGGTGGAATTTTGAAGGGTGTTTCTCTTTGCTTTTTACAAAAATCCCCCTTGGGGTTGGCTTCTTGGTGACGAATGCTGGAGCTGATAGCGCTCAAGTTT
GACAACAGTCACTACAGACCATGATGAGCACACTATCGGTGAAAATGGTTGAGTCTTTCTCTCTATTCAGAACCTTTGCAACCTTTCCCTCTTCTCAGCGAGGTGTTCCA
AATTATGGGCTTGTTCCATTCTTGCATCAAAATAGAGGATCAAGGGTGAGTTTTTCTAAAATGACATGGAGTTTGGAAAAATGCAGAACACGTGTGGACAATAGTTTGCA
AGCCATTTGCCCTGCCTCTGAAGCTTTTGCTCAAGCGGCTGTTGAAGCACTTAAAGCTGGAAAGGTGATCGCCGTCCCAACTGATACTCTCTACGGGCTCGCTTGTGATG
CTTGTTCTTTGGAGGCAGTCAATAGGATTTATGAGATTAAAGGACGTAAACTTACGAGTCCTCTCGCCATTTGTGTTGGTGATGTTGCTGACATAACTCGTTTTGCTGTA
ATAGACCATTTGCCTCCTGGTTTGCTTGATTCTCTCCTTCCAGGGCCCGTAACTGTTGTACTAAAAAGAGGCGAGTCGAGTACTCTTGAGAAGTCTTTGAACCCTGGATT
GGACAGTGTAGGAGTCCGTGTACCCGACTATGACTTCATTCGGCTTATTTCTCGTAAATCGAAGACAGCCTTGGCCCTTACAAGTGCTAATTTAAGTGGGCAACCAAGTA
GTGTCTGTATAAATGATTTCGAAAGCATATGGCCACACTGTGCTTATGTATATGATGGTGGCGTTCTTCCTGCTGGGCGAGCAGGTTCTACCATTATCGACCTCACCAAG
AAGGGGACATTTAAGATTATCAGAGCTGGAAGTGCAAAGGATCTGACTGTTGCAACCCTTGAAAGGTATTCCCTGTTGGAAGAAGCAGCTAATTAATATTTGAGCATCAC
AATCATGCCAAGTTTTTCCAAACATGTGTTAATTATTTTAGAGGTTTCTGAGTTTTTTTTTTCCTTTTTTTTTTTCTTTGAGGCCGAGTAAAAGTGAAGATGAGGCCTAT
GGCTTTATTACCACTCCATTTGTAACAATTATATTGCACTTTTTTTTTCTAAAGTTGTGATTTTTATTTGTATGATTATGTAACATTTTGATTATTTGTCAAATTTACTA
TACCCAATGATGAGAATGACTTCATGGAATGAGAATCAACTTCAATTTTATGTATAGATTTTGGATCATTGTACACAATTAGTACCATTGTTTAACTCGTTTTAAAAACT
TTTTTCTAAAGTTTGACTCAATTTAACTAATTAATGC
Protein sequenceShow/hide protein sequence
MMSTLSVKMVESFSLFRTFATFPSSQRGVPNYGLVPFLHQNRGSRVSFSKMTWSLEKCRTRVDNSLQAICPASEAFAQAAVEALKAGKVIAVPTDTLYGLACDACSLEAV
NRIYEIKGRKLTSPLAICVGDVADITRFAVIDHLPPGLLDSLLPGPVTVVLKRGESSTLEKSLNPGLDSVGVRVPDYDFIRLISRKSKTALALTSANLSGQPSSVCINDF
ESIWPHCAYVYDGGVLPAGRAGSTIIDLTKKGTFKIIRAGSAKDLTVATLERYSLLEEAAN