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MC03g0263 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC03g0263
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionRetrotransposon protein
Genome locationMC03:7785236..7785350
RNA-Seq ExpressionMC03g0263
SyntenyMC03g0263
Gene Ontology termsGO:0000463 - maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process)
GO:0006412 - translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050106.1 retrotransposon protein [Cucumis melo var. makuwa]1.25e-0765.79Show/hide
Query:  QILRKQYTAIVEMMGPACTRF-WNDVLKCIKAEKDVYD
        +IL+KQY AI EMMGPAC+ F WN+  KCI+AEK V+D
Subjt:  QILRKQYTAIVEMMGPACTRF-WNDVLKCIKAEKDVYD
KGN51053.1 hypothetical protein Csa_009100 [Cucumis sativus]3.23e-1071.05Show/hide
Query:  QILRKQYTAIVEMMGPACTRF-WNDVLKCIKAEKDVYD
        +IL+KQYTAIVEMMGP+C+RF WN+  KCI+AEK V+D
Subjt:  QILRKQYTAIVEMMGPACTRF-WNDVLKCIKAEKDVYD
TYJ96933.1 retrotransposon protein [Cucumis melo var. makuwa]2.08e-0865.79Show/hide
Query:  QILRKQYTAIVEMMGPACTRF-WNDVLKCIKAEKDVYD
        + L+KQYTAI +MMGPAC+RF WN+  KCI+AEK V+D
Subjt:  QILRKQYTAIVEMMGPACTRF-WNDVLKCIKAEKDVYD
XP_008455678.1 PREDICTED: uncharacterized protein At2g29880-like [Cucumis melo]2.57e-0865.79Show/hide
Query:  QILRKQYTAIVEMMGPACTRF-WNDVLKCIKAEKDVYD
        + L+KQYTAI +MMGPAC+RF WN+  KCI+AEK V+D
Subjt:  QILRKQYTAIVEMMGPACTRF-WNDVLKCIKAEKDVYD
XP_031741735.1 uncharacterized protein At2g29880-like [Cucumis sativus]2.72e-0971.05Show/hide
Query:  QILRKQYTAIVEMMGPACTRF-WNDVLKCIKAEKDVYD
        +IL+KQYTAIVEMMGP+C+RF WN+  KCI+AEK V+D
Subjt:  QILRKQYTAIVEMMGPACTRF-WNDVLKCIKAEKDVYD
TrEMBL top hitse value%identityAlignment
A0A0A0KNB4 Uncharacterized protein1.56e-1071.05Show/hide
Query:  QILRKQYTAIVEMMGPACTRF-WNDVLKCIKAEKDVYD
        +IL+KQYTAIVEMMGP+C+RF WN+  KCI+AEK V+D
Subjt:  QILRKQYTAIVEMMGPACTRF-WNDVLKCIKAEKDVYD
A0A1S3C252 uncharacterized protein At2g29880-like1.25e-0865.79Show/hide
Query:  QILRKQYTAIVEMMGPACTRF-WNDVLKCIKAEKDVYD
        + L+KQYTAI +MMGPAC+RF WN+  KCI+AEK V+D
Subjt:  QILRKQYTAIVEMMGPACTRF-WNDVLKCIKAEKDVYD
A0A5A7T0P1 Retrotransposon protein7.28e-0870.59Show/hide
Query:  KQYTAIVEMMGPACTRF-WNDVLKCIKAEKDVYD
        KQYTAI EMMGPAC+ F WN+  KCI+AEK V+D
Subjt:  KQYTAIVEMMGPACTRF-WNDVLKCIKAEKDVYD
A0A5A7U7F7 Retrotransposon protein6.03e-0865.79Show/hide
Query:  QILRKQYTAIVEMMGPACTRF-WNDVLKCIKAEKDVYD
        +IL+KQY AI EMMGPAC+ F WN+  KCI+AEK V+D
Subjt:  QILRKQYTAIVEMMGPACTRF-WNDVLKCIKAEKDVYD
A0A5D3BC95 Retrotransposon protein1.01e-0865.79Show/hide
Query:  QILRKQYTAIVEMMGPACTRF-WNDVLKCIKAEKDVYD
        + L+KQYTAI +MMGPAC+RF WN+  KCI+AEK V+D
Subjt:  QILRKQYTAIVEMMGPACTRF-WNDVLKCIKAEKDVYD
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CAAATTTTAAGGAAACAATATACTGCTATTGTTGAGATGATGGGACCAGCGTGTACCAGATTCTGGAACGATGTACTTAAATGCATTAAGGCAGAGAAAGATGTGTACGA
T
mRNA sequenceShow/hide mRNA sequence
CAAATTTTAAGGAAACAATATACTGCTATTGTTGAGATGATGGGACCAGCGTGTACCAGATTCTGGAACGATGTACTTAAATGCATTAAGGCAGAGAAAGATGTGTACGA
T
Protein sequenceShow/hide protein sequence
QILRKQYTAIVEMMGPACTRFWNDVLKCIKAEKDVYD