; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC03g0287 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC03g0287
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationMC03:8578602..8578778
RNA-Seq ExpressionMC03g0287
SyntenyMC03g0287
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR032867 - DYW domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004138309.2 pentatricopeptide repeat-containing protein At4g21065 [Cucumis sativus]3.72e-2581.36Show/hide
Query:  GYITGTEMALFDIEEEEKQHFVMYHSEKLALAVGLLNSPLDCTSRIVKNLNIYMDCHEF
        GY+TGT+MAL+DIE+EEK+H VMYHSEKLALA GLLNSPLDCT RIVKNL I +DCHEF
Subjt:  GYITGTEMALFDIEEEEKQHFVMYHSEKLALAVGLLNSPLDCTSRIVKNLNIYMDCHEF

XP_022134759.1 pentatricopeptide repeat-containing protein At4g21065-like [Momordica charantia]5.34e-2584.75Show/hide
Query:  GYITGTEMALFDIEEEEKQHFVMYHSEKLALAVGLLNSPLDCTSRIVKNLNIYMDCHEF
        GYITGT MALFDIEEEEK+H VMYHSEKLALA GLLNSPLDC  RIVKNL I +DCHEF
Subjt:  GYITGTEMALFDIEEEEKQHFVMYHSEKLALAVGLLNSPLDCTSRIVKNLNIYMDCHEF

XP_022925029.1 pentatricopeptide repeat-containing protein At4g21065-like [Cucurbita moschata]9.67e-2581.36Show/hide
Query:  GYITGTEMALFDIEEEEKQHFVMYHSEKLALAVGLLNSPLDCTSRIVKNLNIYMDCHEF
        GY+TGT+M+LFDIE+EEK+H VMYHSEKLALA GLLNSPLDCT RIVKNL I  DCHEF
Subjt:  GYITGTEMALFDIEEEEKQHFVMYHSEKLALAVGLLNSPLDCTSRIVKNLNIYMDCHEF

XP_023003968.1 pentatricopeptide repeat-containing protein At4g21065-like [Cucurbita maxima]8.97e-2581.36Show/hide
Query:  GYITGTEMALFDIEEEEKQHFVMYHSEKLALAVGLLNSPLDCTSRIVKNLNIYMDCHEF
        GY+TGT+M+LFDIE+EEK+H VMYHSEKLALA GLLNSPLDCT RIVKNL I  DCHEF
Subjt:  GYITGTEMALFDIEEEEKQHFVMYHSEKLALAVGLLNSPLDCTSRIVKNLNIYMDCHEF

XP_023529316.1 pentatricopeptide repeat-containing protein At4g21065-like [Cucurbita pepo subsp. pepo]9.67e-2581.36Show/hide
Query:  GYITGTEMALFDIEEEEKQHFVMYHSEKLALAVGLLNSPLDCTSRIVKNLNIYMDCHEF
        GY+TGT+M+LFDIE+EEK+H VMYHSEKLALA GLLNSPLDCT RIVKNL I  DCHEF
Subjt:  GYITGTEMALFDIEEEEKQHFVMYHSEKLALAVGLLNSPLDCTSRIVKNLNIYMDCHEF

TrEMBL top hitse value%identityAlignment
A0A0A0LUK8 DYW_deaminase domain-containing protein1.80e-2581.36Show/hide
Query:  GYITGTEMALFDIEEEEKQHFVMYHSEKLALAVGLLNSPLDCTSRIVKNLNIYMDCHEF
        GY+TGT+MAL+DIE+EEK+H VMYHSEKLALA GLLNSPLDCT RIVKNL I +DCHEF
Subjt:  GYITGTEMALFDIEEEEKQHFVMYHSEKLALAVGLLNSPLDCTSRIVKNLNIYMDCHEF

A0A1S4DZH3 pentatricopeptide repeat-containing protein At4g21065-like5.83e-2577.97Show/hide
Query:  GYITGTEMALFDIEEEEKQHFVMYHSEKLALAVGLLNSPLDCTSRIVKNLNIYMDCHEF
        GY+TGT+MAL+D+E+EEK+H +MYHSEKLALA GLLNSPLDCT RIVKNL I +DCHEF
Subjt:  GYITGTEMALFDIEEEEKQHFVMYHSEKLALAVGLLNSPLDCTSRIVKNLNIYMDCHEF

A0A6J1BZP4 pentatricopeptide repeat-containing protein At4g21065-like2.58e-2584.75Show/hide
Query:  GYITGTEMALFDIEEEEKQHFVMYHSEKLALAVGLLNSPLDCTSRIVKNLNIYMDCHEF
        GYITGT MALFDIEEEEK+H VMYHSEKLALA GLLNSPLDC  RIVKNL I +DCHEF
Subjt:  GYITGTEMALFDIEEEEKQHFVMYHSEKLALAVGLLNSPLDCTSRIVKNLNIYMDCHEF

A0A6J1EAY2 pentatricopeptide repeat-containing protein At4g21065-like4.68e-2581.36Show/hide
Query:  GYITGTEMALFDIEEEEKQHFVMYHSEKLALAVGLLNSPLDCTSRIVKNLNIYMDCHEF
        GY+TGT+M+LFDIE+EEK+H VMYHSEKLALA GLLNSPLDCT RIVKNL I  DCHEF
Subjt:  GYITGTEMALFDIEEEEKQHFVMYHSEKLALAVGLLNSPLDCTSRIVKNLNIYMDCHEF

A0A6J1KY52 pentatricopeptide repeat-containing protein At4g21065-like4.34e-2581.36Show/hide
Query:  GYITGTEMALFDIEEEEKQHFVMYHSEKLALAVGLLNSPLDCTSRIVKNLNIYMDCHEF
        GY+TGT+M+LFDIE+EEK+H VMYHSEKLALA GLLNSPLDCT RIVKNL I  DCHEF
Subjt:  GYITGTEMALFDIEEEEKQHFVMYHSEKLALAVGLLNSPLDCTSRIVKNLNIYMDCHEF

SwissProt top hitse value%identityAlignment
P0C7R1 Pentatricopeptide repeat-containing protein DWY1, chloroplastic4.7e-1149.15Show/hide
Query:  GYITGTEMALFDIEEEEKQHFVMYHSEKLALAVGLLNSPLDCTSRIVKNLNIYMDCHEF
        GY+  T+  L DI+EE K+  +M+HSE+LA+A G++N+P   T R++KNL I  DCH F
Subjt:  GYITGTEMALFDIEEEEKQHFVMYHSEKLALAVGLLNSPLDCTSRIVKNLNIYMDCHEF

Q0WSH6 Pentatricopeptide repeat-containing protein At4g148506.2e-1155.93Show/hide
Query:  GYITGTEMALFDIEEEEKQHFVMYHSEKLALAVGLLNSPLDCTSRIVKNLNIYMDCHEF
        GY    +++L+D+EEEEK   V +HSEKLALA GLL+ PL    RI KNL I  DCH F
Subjt:  GYITGTEMALFDIEEEEKQHFVMYHSEKLALAVGLLNSPLDCTSRIVKNLNIYMDCHEF

Q9SHZ8 Pentatricopeptide repeat-containing protein At2g220708.9e-1049.12Show/hide
Query:  GYITGTEMALFDIEEEEKQHFVMYHSEKLALAVGLLNSPLDCTSRIVKNLNIYMDCH
        GY+  T   L D+EEE K+  + +HSEKLA+A GL+++P   T RI+KNL +  DCH
Subjt:  GYITGTEMALFDIEEEEKQHFVMYHSEKLALAVGLLNSPLDCTSRIVKNLNIYMDCH

Q9SMZ2 Pentatricopeptide repeat-containing protein At4g331704.7e-1150.88Show/hide
Query:  GYITGTEMALFDIEEEEKQHFVMYHSEKLALAVGLLNSPLDCTSRIVKNLNIYMDCH
        GY+  T+  L D+EEEEK+  + YHSEKLA+A GLL++P     R++KNL +  DCH
Subjt:  GYITGTEMALFDIEEEEKQHFVMYHSEKLALAVGLLNSPLDCTSRIVKNLNIYMDCH

Q9SR82 Putative pentatricopeptide repeat-containing protein At3g088208.1e-1150Show/hide
Query:  GYITGTEMALFDIEEEEKQHFVMYHSEKLALAVGLLNSPLDCTSRIVKNLNIYMDCHE
        G++  TE   FD+EEEEK+  + YHSEKLA+A+GL+++      R+VKNL +  DCHE
Subjt:  GYITGTEMALFDIEEEEKQHFVMYHSEKLALAVGLLNSPLDCTSRIVKNLNIYMDCHE

Arabidopsis top hitse value%identityAlignment
AT1G47580.1 Pentatricopeptide repeat (PPR) superfamily protein3.4e-1249.15Show/hide
Query:  GYITGTEMALFDIEEEEKQHFVMYHSEKLALAVGLLNSPLDCTSRIVKNLNIYMDCHEF
        GY+  T+  L DI+EE K+  +M+HSE+LA+A G++N+P   T R++KNL I  DCH F
Subjt:  GYITGTEMALFDIEEEEKQHFVMYHSEKLALAVGLLNSPLDCTSRIVKNLNIYMDCHEF

AT2G22070.1 pentatricopeptide (PPR) repeat-containing protein6.4e-1149.12Show/hide
Query:  GYITGTEMALFDIEEEEKQHFVMYHSEKLALAVGLLNSPLDCTSRIVKNLNIYMDCH
        GY+  T   L D+EEE K+  + +HSEKLA+A GL+++P   T RI+KNL +  DCH
Subjt:  GYITGTEMALFDIEEEEKQHFVMYHSEKLALAVGLLNSPLDCTSRIVKNLNIYMDCH

AT3G08820.1 Pentatricopeptide repeat (PPR) superfamily protein5.7e-1250Show/hide
Query:  GYITGTEMALFDIEEEEKQHFVMYHSEKLALAVGLLNSPLDCTSRIVKNLNIYMDCHE
        G++  TE   FD+EEEEK+  + YHSEKLA+A+GL+++      R+VKNL +  DCHE
Subjt:  GYITGTEMALFDIEEEEKQHFVMYHSEKLALAVGLLNSPLDCTSRIVKNLNIYMDCHE

AT4G14850.1 Pentatricopeptide repeat (PPR) superfamily protein4.4e-1255.93Show/hide
Query:  GYITGTEMALFDIEEEEKQHFVMYHSEKLALAVGLLNSPLDCTSRIVKNLNIYMDCHEF
        GY    +++L+D+EEEEK   V +HSEKLALA GLL+ PL    RI KNL I  DCH F
Subjt:  GYITGTEMALFDIEEEEKQHFVMYHSEKLALAVGLLNSPLDCTSRIVKNLNIYMDCHEF

AT4G33170.1 Tetratricopeptide repeat (TPR)-like superfamily protein3.4e-1250.88Show/hide
Query:  GYITGTEMALFDIEEEEKQHFVMYHSEKLALAVGLLNSPLDCTSRIVKNLNIYMDCH
        GY+  T+  L D+EEEEK+  + YHSEKLA+A GLL++P     R++KNL +  DCH
Subjt:  GYITGTEMALFDIEEEEKQHFVMYHSEKLALAVGLLNSPLDCTSRIVKNLNIYMDCH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGTTACATTACGGGCACCGAAATGGCTTTGTTTGATATTGAGGAAGAAGAGAAACAACATTTTGTGATGTACCACAGTGAGAAACTTGCTTTAGCTGTTGGTCTCTTAAA
CTCTCCTTTAGATTGCACCTCAAGGATAGTGAAAAATCTGAACATTTACATGGACTGTCATGAGTTT
mRNA sequenceShow/hide mRNA sequence
GGTTACATTACGGGCACCGAAATGGCTTTGTTTGATATTGAGGAAGAAGAGAAACAACATTTTGTGATGTACCACAGTGAGAAACTTGCTTTAGCTGTTGGTCTCTTAAA
CTCTCCTTTAGATTGCACCTCAAGGATAGTGAAAAATCTGAACATTTACATGGACTGTCATGAGTTT
Protein sequenceShow/hide protein sequence
GYITGTEMALFDIEEEEKQHFVMYHSEKLALAVGLLNSPLDCTSRIVKNLNIYMDCHEF