; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC03g0298 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC03g0298
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
Genome locationMC03:8896751..8896984
RNA-Seq ExpressionMC03g0298
SyntenyMC03g0298
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022143535.1 uncharacterized protein LOC111013412 [Momordica charantia]5.95e-1247.44Show/hide
Query:  KLKTDSAWHILRKARGLEWILRDEKGQVIRAGCKPKLSDWEVTYIALLAISEGLEAAIEISSKLIILESDSLEVIRLL
        KL T++AW       G+ WILRDEKG+VI+A C+   ++  +TY+ ++AI EGL A  +   + I LESDSLE I LL
Subjt:  KLKTDSAWHILRKARGLEWILRDEKGQVIRAGCKPKLSDWEVTYIALLAISEGLEAAIEISSKLIILESDSLEVIRLL

XP_022148737.1 uncharacterized protein LOC111017329 [Momordica charantia]2.45e-1143.59Show/hide
Query:  KLKTDSAWHILRKARGLEWILRDEKGQVIRAGCKPKLSDWEVTYIALLAISEGLEAAIEISSKLIILESDSLEVIRLL
        KL TD+AWH  +   GL WI+R+EK ++ +AG +      ++TY+ L+AI  G+EA +  SS  +I+ES+SLE I L+
Subjt:  KLKTDSAWHILRKARGLEWILRDEKGQVIRAGCKPKLSDWEVTYIALLAISEGLEAAIEISSKLIILESDSLEVIRLL

XP_022154990.1 uncharacterized protein LOC111022134 isoform X1 [Momordica charantia]1.95e-1248.72Show/hide
Query:  KLKTDSAWHILRKARGLEWILRDEKGQVIRAGCKPKLSDWEVTYIALLAISEGLEAAIEISSKLIILESDSLEVIRLL
        KL TD+AW       G+ WILRDEKG+VI+ GC+   ++  +TY+ ++AI EGL A  +   + I LESDSLE I LL
Subjt:  KLKTDSAWHILRKARGLEWILRDEKGQVIRAGCKPKLSDWEVTYIALLAISEGLEAAIEISSKLIILESDSLEVIRLL

XP_022154991.1 uncharacterized protein LOC111022134 isoform X2 [Momordica charantia]1.62e-1248.72Show/hide
Query:  KLKTDSAWHILRKARGLEWILRDEKGQVIRAGCKPKLSDWEVTYIALLAISEGLEAAIEISSKLIILESDSLEVIRLL
        KL TD+AW       G+ WILRDEKG+VI+ GC+   ++  +TY+ ++AI EGL A  +   + I LESDSLE I LL
Subjt:  KLKTDSAWHILRKARGLEWILRDEKGQVIRAGCKPKLSDWEVTYIALLAISEGLEAAIEISSKLIILESDSLEVIRLL

XP_022156777.1 uncharacterized protein LOC111023608 [Momordica charantia]1.00e-0944.19Show/hide
Query:  KLKTDSAWHILRKARGLEWILRDEKGQVIRAGCKPKLSDWEVTYIALLAISEGLEAAIEISSKLII--------LESDSLEVIRLL
        KL TD+AW       G+ WILRDEKG+VI+A C+   ++  +TY+ ++AI EGL A  +   + I         LESDSLE I LL
Subjt:  KLKTDSAWHILRKARGLEWILRDEKGQVIRAGCKPKLSDWEVTYIALLAISEGLEAAIEISSKLII--------LESDSLEVIRLL

TrEMBL top hitse value%identityAlignment
A0A6J1CP26 uncharacterized protein LOC1110134122.88e-1247.44Show/hide
Query:  KLKTDSAWHILRKARGLEWILRDEKGQVIRAGCKPKLSDWEVTYIALLAISEGLEAAIEISSKLIILESDSLEVIRLL
        KL T++AW       G+ WILRDEKG+VI+A C+   ++  +TY+ ++AI EGL A  +   + I LESDSLE I LL
Subjt:  KLKTDSAWHILRKARGLEWILRDEKGQVIRAGCKPKLSDWEVTYIALLAISEGLEAAIEISSKLIILESDSLEVIRLL

A0A6J1D5W1 uncharacterized protein LOC1110173291.18e-1143.59Show/hide
Query:  KLKTDSAWHILRKARGLEWILRDEKGQVIRAGCKPKLSDWEVTYIALLAISEGLEAAIEISSKLIILESDSLEVIRLL
        KL TD+AWH  +   GL WI+R+EK ++ +AG +      ++TY+ L+AI  G+EA +  SS  +I+ES+SLE I L+
Subjt:  KLKTDSAWHILRKARGLEWILRDEKGQVIRAGCKPKLSDWEVTYIALLAISEGLEAAIEISSKLIILESDSLEVIRLL

A0A6J1DL64 uncharacterized protein LOC111022134 isoform X19.46e-1348.72Show/hide
Query:  KLKTDSAWHILRKARGLEWILRDEKGQVIRAGCKPKLSDWEVTYIALLAISEGLEAAIEISSKLIILESDSLEVIRLL
        KL TD+AW       G+ WILRDEKG+VI+ GC+   ++  +TY+ ++AI EGL A  +   + I LESDSLE I LL
Subjt:  KLKTDSAWHILRKARGLEWILRDEKGQVIRAGCKPKLSDWEVTYIALLAISEGLEAAIEISSKLIILESDSLEVIRLL

A0A6J1DQC9 uncharacterized protein LOC111022134 isoform X27.86e-1348.72Show/hide
Query:  KLKTDSAWHILRKARGLEWILRDEKGQVIRAGCKPKLSDWEVTYIALLAISEGLEAAIEISSKLIILESDSLEVIRLL
        KL TD+AW       G+ WILRDEKG+VI+ GC+   ++  +TY+ ++AI EGL A  +   + I LESDSLE I LL
Subjt:  KLKTDSAWHILRKARGLEWILRDEKGQVIRAGCKPKLSDWEVTYIALLAISEGLEAAIEISSKLIILESDSLEVIRLL

A0A6J1DSV1 uncharacterized protein LOC1110236084.86e-1044.19Show/hide
Query:  KLKTDSAWHILRKARGLEWILRDEKGQVIRAGCKPKLSDWEVTYIALLAISEGLEAAIEISSKLII--------LESDSLEVIRLL
        KL TD+AW       G+ WILRDEKG+VI+A C+   ++  +TY+ ++AI EGL A  +   + I         LESDSLE I LL
Subjt:  KLKTDSAWHILRKARGLEWILRDEKGQVIRAGCKPKLSDWEVTYIALLAISEGLEAAIEISSKLII--------LESDSLEVIRLL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAATTAAAAACCGACTCAGCTTGGCACATATTGAGAAAGGCTAGAGGTTTGGAGTGGATCCTCAGAGATGAGAAAGGACAGGTGATTAGAGCAGGTTGCAAACCAAAACT
TTCAGATTGGGAAGTGACTTACATTGCATTGCTTGCTATTAGCGAAGGCTTAGAAGCGGCCATCGAAATTTCGTCAAAACTAATCATTTTGGAGTCTGATTCATTAGAGG
TTATTCGTCTTCTT
mRNA sequenceShow/hide mRNA sequence
AAATTAAAAACCGACTCAGCTTGGCACATATTGAGAAAGGCTAGAGGTTTGGAGTGGATCCTCAGAGATGAGAAAGGACAGGTGATTAGAGCAGGTTGCAAACCAAAACT
TTCAGATTGGGAAGTGACTTACATTGCATTGCTTGCTATTAGCGAAGGCTTAGAAGCGGCCATCGAAATTTCGTCAAAACTAATCATTTTGGAGTCTGATTCATTAGAGG
TTATTCGTCTTCTT
Protein sequenceShow/hide protein sequence
KLKTDSAWHILRKARGLEWILRDEKGQVIRAGCKPKLSDWEVTYIALLAISEGLEAAIEISSKLIILESDSLEVIRLL