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MC03g0331 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC03g0331
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description30S ribosomal protein S12, chloroplastic
Genome locationMC03:9701188..9701319
RNA-Seq ExpressionMC03g0331
SyntenyMC03g0331
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0015935 - small ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR006032 - Ribosomal protein S12/S23
IPR012340 - Nucleic acid-binding, OB-fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AEK71443.1 ribosomal protein S12, partial [Ceanothus prostratus]6.48e-2295.45Show/hide
Query:  PKKPNSALRKVVRVRLTSGFEITAYIPGIGHNLQEHFVVLVRGG
        PKKPNSALRKV RVRLTSGFEITAYIPGIGHNLQEH VVLVRGG
Subjt:  PKKPNSALRKVVRVRLTSGFEITAYIPGIGHNLQEHFVVLVRGG
AEK71501.1 ribosomal protein S12, partial [Krameria lanceolata]6.80e-2295.45Show/hide
Query:  PKKPNSALRKVVRVRLTSGFEITAYIPGIGHNLQEHFVVLVRGG
        PKKPNSALRKV RVRLTSGFEITAYIPGIGHNLQEH VVLVRGG
Subjt:  PKKPNSALRKVVRVRLTSGFEITAYIPGIGHNLQEHFVVLVRGG
AEK71535.1 ribosomal protein S12, partial [Ochna mossambicensis]6.64e-2295.45Show/hide
Query:  PKKPNSALRKVVRVRLTSGFEITAYIPGIGHNLQEHFVVLVRGG
        PKKPNSALRKV RVRLTSGFEITAYIPGIGHNLQEH VVLVRGG
Subjt:  PKKPNSALRKVVRVRLTSGFEITAYIPGIGHNLQEHFVVLVRGG
AEK71581.1 ribosomal protein S12, partial [Stylobasium spathulatum]6.80e-2295.45Show/hide
Query:  PKKPNSALRKVVRVRLTSGFEITAYIPGIGHNLQEHFVVLVRGG
        PKKPNSALRKV RVRLTSGFEITAYIPGIGHNLQEH VVLVRGG
Subjt:  PKKPNSALRKVVRVRLTSGFEITAYIPGIGHNLQEHFVVLVRGG
AVV66275.1 ribosomal protein S12, partial [Asarum megacalyx]6.80e-2295.45Show/hide
Query:  PKKPNSALRKVVRVRLTSGFEITAYIPGIGHNLQEHFVVLVRGG
        PKKPNSALRKV RVRLTSGFEITAYIPGIGHNLQEH VVLVRGG
Subjt:  PKKPNSALRKVVRVRLTSGFEITAYIPGIGHNLQEHFVVLVRGG
TrEMBL top hitse value%identityAlignment
A0A452XUT7 Uncharacterized protein2.99e-2295.45Show/hide
Query:  PKKPNSALRKVVRVRLTSGFEITAYIPGIGHNLQEHFVVLVRGG
        PKKPNSALRKV RVRLTSGFEITAYIPGIGHNLQEH VVLVRGG
Subjt:  PKKPNSALRKVVRVRLTSGFEITAYIPGIGHNLQEHFVVLVRGG
G0YCW6 Ribosomal protein S12 (Fragment)3.14e-2295.45Show/hide
Query:  PKKPNSALRKVVRVRLTSGFEITAYIPGIGHNLQEHFVVLVRGG
        PKKPNSALRKV RVRLTSGFEITAYIPGIGHNLQEH VVLVRGG
Subjt:  PKKPNSALRKVVRVRLTSGFEITAYIPGIGHNLQEHFVVLVRGG
G0YD58 Ribosomal protein S12 (Fragment)3.22e-2295.45Show/hide
Query:  PKKPNSALRKVVRVRLTSGFEITAYIPGIGHNLQEHFVVLVRGG
        PKKPNSALRKV RVRLTSGFEITAYIPGIGHNLQEH VVLVRGG
Subjt:  PKKPNSALRKVVRVRLTSGFEITAYIPGIGHNLQEHFVVLVRGG
G0YDA4 Ribosomal protein S12 (Fragment)3.29e-2295.45Show/hide
Query:  PKKPNSALRKVVRVRLTSGFEITAYIPGIGHNLQEHFVVLVRGG
        PKKPNSALRKV RVRLTSGFEITAYIPGIGHNLQEH VVLVRGG
Subjt:  PKKPNSALRKVVRVRLTSGFEITAYIPGIGHNLQEHFVVLVRGG
M0VL51 Uncharacterized protein2.99e-2295.45Show/hide
Query:  PKKPNSALRKVVRVRLTSGFEITAYIPGIGHNLQEHFVVLVRGG
        PKKPNSALRKV RVRLTSGFEITAYIPGIGHNLQEH VVLVRGG
Subjt:  PKKPNSALRKVVRVRLTSGFEITAYIPGIGHNLQEHFVVLVRGG
SwissProt top hitse value%identityAlignment
A4QJD9 30S ribosomal protein S12, chloroplastic2.5e-1795.45Show/hide
Query:  PKKPNSALRKVVRVRLTSGFEITAYIPGIGHNLQEHFVVLVRGG
        PKKPNSALRKV RVRLTSGFEITAYIPGIGHNLQEH VVLVRGG
Subjt:  PKKPNSALRKVVRVRLTSGFEITAYIPGIGHNLQEHFVVLVRGG
A4QJM3 30S ribosomal protein S12, chloroplastic2.5e-1795.45Show/hide
Query:  PKKPNSALRKVVRVRLTSGFEITAYIPGIGHNLQEHFVVLVRGG
        PKKPNSALRKV RVRLTSGFEITAYIPGIGHNLQEH VVLVRGG
Subjt:  PKKPNSALRKVVRVRLTSGFEITAYIPGIGHNLQEHFVVLVRGG
A4QJV5 30S ribosomal protein S12-A, chloroplastic2.5e-1795.45Show/hide
Query:  PKKPNSALRKVVRVRLTSGFEITAYIPGIGHNLQEHFVVLVRGG
        PKKPNSALRKV RVRLTSGFEITAYIPGIGHNLQEH VVLVRGG
Subjt:  PKKPNSALRKVVRVRLTSGFEITAYIPGIGHNLQEHFVVLVRGG
A4QJX7 30S ribosomal protein S12-B, chloroplastic2.5e-1795.45Show/hide
Query:  PKKPNSALRKVVRVRLTSGFEITAYIPGIGHNLQEHFVVLVRGG
        PKKPNSALRKV RVRLTSGFEITAYIPGIGHNLQEH VVLVRGG
Subjt:  PKKPNSALRKVVRVRLTSGFEITAYIPGIGHNLQEHFVVLVRGG
Q3V510 30S ribosomal protein S12, chloroplastic2.5e-1795.45Show/hide
Query:  PKKPNSALRKVVRVRLTSGFEITAYIPGIGHNLQEHFVVLVRGG
        PKKPNSALRKV RVRLTSGFEITAYIPGIGHNLQEH VVLVRGG
Subjt:  PKKPNSALRKVVRVRLTSGFEITAYIPGIGHNLQEHFVVLVRGG
Arabidopsis top hitse value%identityAlignment
AT2G07675.1 Ribosomal protein S12/S23 family protein8.1e-1163.64Show/hide
Query:  PKKPNSALRKVVRVRLTSGFEITAYIPGIGHNLQEHFVVLVRGG
        PKKPNSA RK+ +VRL++  +I A+IPG GHN QEH  VL+RGG
Subjt:  PKKPNSALRKVVRVRLTSGFEITAYIPGIGHNLQEHFVVLVRGG
ATCG00065.1 ribosomal protein S12A1.8e-1895.45Show/hide
Query:  PKKPNSALRKVVRVRLTSGFEITAYIPGIGHNLQEHFVVLVRGG
        PKKPNSALRKV RVRLTSGFEITAYIPGIGHNLQEH VVLVRGG
Subjt:  PKKPNSALRKVVRVRLTSGFEITAYIPGIGHNLQEHFVVLVRGG
ATCG00905.1 ribosomal protein S12C1.8e-1895.45Show/hide
Query:  PKKPNSALRKVVRVRLTSGFEITAYIPGIGHNLQEHFVVLVRGG
        PKKPNSALRKV RVRLTSGFEITAYIPGIGHNLQEH VVLVRGG
Subjt:  PKKPNSALRKVVRVRLTSGFEITAYIPGIGHNLQEHFVVLVRGG
ATCG01230.1 ribosomal protein S12B1.8e-1895.45Show/hide
Query:  PKKPNSALRKVVRVRLTSGFEITAYIPGIGHNLQEHFVVLVRGG
        PKKPNSALRKV RVRLTSGFEITAYIPGIGHNLQEH VVLVRGG
Subjt:  PKKPNSALRKVVRVRLTSGFEITAYIPGIGHNLQEHFVVLVRGG
ATMG00980.1 Ribosomal protein S12/S23 family protein8.1e-1163.64Show/hide
Query:  PKKPNSALRKVVRVRLTSGFEITAYIPGIGHNLQEHFVVLVRGG
        PKKPNSA RK+ +VRL++  +I A+IPG GHN QEH  VL+RGG
Subjt:  PKKPNSALRKVVRVRLTSGFEITAYIPGIGHNLQEHFVVLVRGG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CCCAAAAAACCAAACTCTGCCTTACGTAAAGTTGTCAGAGTACGCTTAACCTCGGGATTTGAAATCACTGCTTATATACCTGGTATTGGCCATAATTTACAAGAACATTT
TGTAGTCTTAGTAAGAGGTGGA
mRNA sequenceShow/hide mRNA sequence
CCCAAAAAACCAAACTCTGCCTTACGTAAAGTTGTCAGAGTACGCTTAACCTCGGGATTTGAAATCACTGCTTATATACCTGGTATTGGCCATAATTTACAAGAACATTT
TGTAGTCTTAGTAAGAGGTGGA
Protein sequenceShow/hide protein sequence
PKKPNSALRKVVRVRLTSGFEITAYIPGIGHNLQEHFVVLVRGG