CuGenDBv2

Gene ID	MC03g0426
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	40S ribosomal protein S25
Genome location	MC03:11181188..11184303
RNA-Seq Expression	MC03g0426
Synteny	MC03g0426
Gene Ontology terms	GO:0022627 - cytosolic small ribosomal subunit (cellular component) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR004977 - Ribosomal protein S25

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004140903.1 40S ribosomal protein S25-2 [Cucumis sativus]

5.21e-64

94.44

Show/hide

Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNLVLFDQGTYDKLLSEAPKYKLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ
        MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNN+VLFDQGTYDKLLSE PKYKL+TPSILSDR+R+NGSLARRAIKDLMARGSIR+ISAHSSQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNLVLFDQGTYDKLLSEAPKYKLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

XP_008391134.1 40S ribosomal protein S25-like [Malus domestica]

5.21e-64

96.3

Show/hide

Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNLVLFDQGTYDKLLSEAPKYKLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ
        MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNN+VLFDQGTYDKLLSE PKYKLITPSILSDRLRINGSLARRAIKDLMARGSIRLI+AH+SQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNLVLFDQGTYDKLLSEAPKYKLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

XP_008442240.1 PREDICTED: 40S ribosomal protein S25-2 [Cucumis melo]

6.33e-65

98.15

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Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNLVLFDQGTYDKLLSEAPKYKLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ
        MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNN+VLFDQGTYDKLLSEAPK+KLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNLVLFDQGTYDKLLSEAPKYKLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

XP_008456601.1 PREDICTED: 40S ribosomal protein S25-2-like [Cucumis melo]

1.82e-64

96.3

Show/hide

Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNLVLFDQGTYDKLLSEAPKYKLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ
        MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNN+VLFDQGTYDKLLSE PKYKL+TPSILSDRLRINGSLARRAIKDLMARGSIR+ISAHSSQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNLVLFDQGTYDKLLSEAPKYKLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

XP_022142384.1 40S ribosomal protein S25-2 [Momordica charantia]

7.70e-66

100

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Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNLVLFDQGTYDKLLSEAPKYKLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ
        MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNLVLFDQGTYDKLLSEAPKYKLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNLVLFDQGTYDKLLSEAPKYKLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

TrEMBL top hits

e value

%identity

Alignment

A0A1S3B608 40S ribosomal protein S25

3.07e-65

98.15

Show/hide

Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNLVLFDQGTYDKLLSEAPKYKLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ
        MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNN+VLFDQGTYDKLLSEAPK+KLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNLVLFDQGTYDKLLSEAPKYKLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

A0A1S3C4W3 40S ribosomal protein S25

8.80e-65

96.3

Show/hide

Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNLVLFDQGTYDKLLSEAPKYKLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ
        MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNN+VLFDQGTYDKLLSE PKYKL+TPSILSDRLRINGSLARRAIKDLMARGSIR+ISAHSSQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNLVLFDQGTYDKLLSEAPKYKLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

A0A5D3CKR9 40S ribosomal protein S25

8.80e-65

96.3

Show/hide

Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNLVLFDQGTYDKLLSEAPKYKLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ
        MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNN+VLFDQGTYDKLLSE PKYKL+TPSILSDRLRINGSLARRAIKDLMARGSIR+ISAHSSQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNLVLFDQGTYDKLLSEAPKYKLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

A0A6J1BYI5 40S ribosomal protein S25

8.80e-65

96.3

Show/hide

Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNLVLFDQGTYDKLLSEAPKYKLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ
        MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNN+VLFDQGTYDKLLSE PKYKL+TPSILSDRLRINGSLARRAIKDLMARGSIR+ISAHSSQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNLVLFDQGTYDKLLSEAPKYKLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

A0A6J1CLE7 40S ribosomal protein S25

3.73e-66

100

Show/hide

Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNLVLFDQGTYDKLLSEAPKYKLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ
        MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNLVLFDQGTYDKLLSEAPKYKLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNLVLFDQGTYDKLLSEAPKYKLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

SwissProt top hits

e value

%identity

Alignment

P46301 40S ribosomal protein S25

3.7e-46

88.89

Show/hide

Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNLVLFDQGTYDKLLSEAPKYKLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ
        MAPKK +APPPSSKPAKSGGGKQKKKKWSKGKQKEKVNN+VLFD+ TYDKLLSEAPKYKLITPS+LSDRLRI+GSLAR+AI+DLMARGSIR++SAH+SQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNLVLFDQGTYDKLLSEAPKYKLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

Q8GYL5 40S ribosomal protein S25-3

2.9e-46

89.72

Show/hide

Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNLVLFDQGTYDKLLSEAPKYKLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ
        MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNN+VLFDQ TYDKLLSEAPK+KLITPSILSDRLRINGSLARRAI++LMA+G+IR++SAHSSQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNLVLFDQGTYDKLLSEAPKYKLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ

Query:  IYTRATN
        IYTRAT+
Subjt:  IYTRATN

Q9SIK2 40S ribosomal protein S25-2

4.4e-47

89.81

Show/hide

Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNLVLFDQGTYDKLLSEAPKYKLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ
        MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNN+VLFDQGTYDKLL+EAPK+KLITPSILSDR+RINGSLARRAI++LMA+G IR++SAHSSQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNLVLFDQGTYDKLLSEAPKYKLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

Q9SIW5 40S ribosomal protein S25-1

4.6e-44

86.79

Show/hide

Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNLVLFDQGTYDKLLSEAPKYKLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ
        MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNN+VLFDQ TYDKL+SEAPK+KLITPSILSDRLRINGSLAR+AI+DLM +G+IR++S HSSQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNLVLFDQGTYDKLLSEAPKYKLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ

Query:  IYTRAT
        I TRAT
Subjt:  IYTRAT

Q9T029 40S ribosomal protein S25-4

4.9e-46

87.96

Show/hide

Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNLVLFDQGTYDKLLSEAPKYKLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ
        MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNN+VLFDQ TYDKLL+EAPK+KLITPSILSDR+RINGSLARRAI++LMA+G IR+++AHSSQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNLVLFDQGTYDKLLSEAPKYKLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

Arabidopsis top hits

e value

%identity

Alignment

AT2G21580.1 Ribosomal protein S25 family protein

3.1e-48

89.81

Show/hide

Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNLVLFDQGTYDKLLSEAPKYKLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ
        MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNN+VLFDQGTYDKLL+EAPK+KLITPSILSDR+RINGSLARRAI++LMA+G IR++SAHSSQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNLVLFDQGTYDKLLSEAPKYKLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

AT2G21580.2 Ribosomal protein S25 family protein

1.7e-46

88.89

Show/hide

Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNLVLFDQGTYDKLLSEAPKYKLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ
        MAPKKDK PPPSSKPAKSGGGKQ KKKWSKGKQKEKVNN+VLFDQGTYDKLL+EAPK+KLITPSILSDR+RINGSLARRAI++LMA+G IR++SAHSSQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNLVLFDQGTYDKLLSEAPKYKLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

AT4G34555.1 Ribosomal protein S25 family protein

2.0e-47

89.72

Show/hide

Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNLVLFDQGTYDKLLSEAPKYKLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ
        MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNN+VLFDQ TYDKLLSEAPK+KLITPSILSDRLRINGSLARRAI++LMA+G+IR++SAHSSQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNLVLFDQGTYDKLLSEAPKYKLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ

Query:  IYTRATN
        IYTRAT+
Subjt:  IYTRATN

AT4G39200.1 Ribosomal protein S25 family protein

3.5e-47

87.96

Show/hide

Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNLVLFDQGTYDKLLSEAPKYKLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ
        MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNN+VLFDQ TYDKLL+EAPK+KLITPSILSDR+RINGSLARRAI++LMA+G IR+++AHSSQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNLVLFDQGTYDKLLSEAPKYKLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

AT4G39200.2 Ribosomal protein S25 family protein

1.9e-45

87.04

Show/hide

Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNLVLFDQGTYDKLLSEAPKYKLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ
        MAPKKDK PPPSSKPAKSGGGKQ KKKWSKGKQKEKVNN+VLFDQ TYDKLL+EAPK+KLITPSILSDR+RINGSLARRAI++LMA+G IR+++AHSSQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNLVLFDQGTYDKLLSEAPKYKLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQ

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCACCGAAGAAGGATAAGGCTCCTCCTCCGTCATCCAAGCCTGCTAAATCTGGCGGAGGAAAGCAGAAGAAGAAGAAATGGAGCAAGGGAAAGCAGAAGGAGAAGGT
GAATAACTTGGTATTGTTTGATCAGGGAACCTACGACAAGCTTCTTTCAGAAGCTCCAAAGTACAAGCTTATCACTCCTTCCATCCTATCCGACAGATTGAGGATCAATG
GATCATTGGCACGTCGGGCAATTAAGGATTTGATGGCGAGAGGTTCAATTAGGCTCATATCGGCTCATTCTAGCCAACAGATATACACTAGAGCCACAAATACATGA

mRNA sequence

Show/hide mRNA sequence

ATCAAAACAAAAAGTACTAATATAGTTTTTAAATCTAAAGAAAACAAAAATCCCTGTACAGTCATCAACGGAGAAACCCTAGACTTTATTATTATGATCTGAACTCCAGC
CAAAGTTCACCCACAACAAGCTTCTGCTTCGTCGTTGAGCCAAATTCTCTGCGCAATACCCAGCCAACATGGCACCGAAGAAGGATAAGGCTCCTCCTCCGTCATCCAAG
CCTGCTAAATCTGGCGGAGGAAAGCAGAAGAAGAAGAAATGGAGCAAGGGAAAGCAGAAGGAGAAGGTGAATAACTTGGTATTGTTTGATCAGGGAACCTACGACAAGCT
TCTTTCAGAAGCTCCAAAGTACAAGCTTATCACTCCTTCCATCCTATCCGACAGATTGAGGATCAATGGATCATTGGCACGTCGGGCAATTAAGGATTTGATGGCGAGAG
GTTCAATTAGGCTCATATCGGCTCATTCTAGCCAACAGATATACACTAGAGCCACAAATACATGATCAAAGAGTTTCTGTTTGCAAGAGGGACATCTTGTTATTTTTTGT
GAGGCCACCATGTCAGGAGCTAATAATATCTATGGTTTTGAACATTATCTTCTGCATCTGTTGAATGATGTTGCATTGAGAACTCGGATGAAAATTATTTGCATTGCTCA
AACGTAATTTTTGAAACATTTTCTTATCTGTGGCTTGGCAATTCACTGTCACGTGGTTTATGTTCTGAGCTCAAGCAATTTAATATGAACAAGATTTGTGAATTCCTGTT
TGAGGA

Protein sequence

Show/hide protein sequence

MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNLVLFDQGTYDKLLSEAPKYKLITPSILSDRLRINGSLARRAIKDLMARGSIRLISAHSSQQIYTRATNT

MC03g0426 (gene) of Bitter gourd (Dali-11) v1 genome