; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC03g0436 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC03g0436
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description50S ribosomal protein L2, chloroplastic
Genome locationMC03:11229614..11229853
RNA-Seq ExpressionMC03g0436
SyntenyMC03g0436
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0016740 - transferase activity (molecular function)
InterPro domainsIPR002171 - Ribosomal protein L2
IPR008991 - Translation protein SH3-like domain superfamily
IPR014722 - Ribosomal protein L2, domain 2
IPR014726 - Ribosomal protein L2, domain 3
IPR022669 - Ribosomal protein L2, C-terminal
IPR022671 - Ribosomal protein L2, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ABK96157.1 unknown [Populus trichocarpa]3.29e-4697.5Show/hide
Query:  LARAAGVVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVENAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHG
        LARAAG VAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQV NAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHG
Subjt:  LARAAGVVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVENAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHG

ACY07935.1 ribosomal protein L2, partial [Cynomorium songaricum]3.50e-4697.5Show/hide
Query:  LARAAGVVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVENAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHG
        LARAAG VAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQV NAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHG
Subjt:  LARAAGVVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVENAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHG

CAA7013030.1 unnamed protein product, partial [Microthlaspi erraticum]4.51e-4696.25Show/hide
Query:  LARAAGVVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVENAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHG
        LARAAG VAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQV N GVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHG
Subjt:  LARAAGVVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVENAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHG

OMP12525.1 Ribosomal protein L2 [Corchorus olitorius]3.75e-4696.25Show/hide
Query:  LARAAGVVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVENAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHG
        LARAAG VAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQV N GVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHG
Subjt:  LARAAGVVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVENAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHG

TYK08770.1 ribosomal protein L2 [Cucumis melo var. makuwa]3.29e-4697.5Show/hide
Query:  LARAAGVVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVENAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHG
        LARAAG VAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQV NAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHG
Subjt:  LARAAGVVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVENAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHG

TrEMBL top hitse value%identityAlignment
A0A1R3KZK2 Ribosomal protein L21.82e-4696.25Show/hide
Query:  LARAAGVVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVENAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHG
        LARAAG VAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQV N GVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHG
Subjt:  LARAAGVVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVENAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHG

A0A5D3CBP8 Ribosomal protein L2 (Chloroplast)1.59e-4697.5Show/hide
Query:  LARAAGVVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVENAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHG
        LARAAG VAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQV NAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHG
Subjt:  LARAAGVVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVENAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHG

A0A6D2HFA4 Ribosomal_L2_C domain-containing protein (Fragment)2.18e-4696.25Show/hide
Query:  LARAAGVVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVENAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHG
        LARAAG VAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQV N GVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHG
Subjt:  LARAAGVVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVENAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHG

A9PIF4 Ribosomal_L2_C domain-containing protein1.59e-4697.5Show/hide
Query:  LARAAGVVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVENAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHG
        LARAAG VAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQV NAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHG
Subjt:  LARAAGVVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVENAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHG

D0QXH7 Ribosomal protein L2 (Fragment)1.69e-4697.5Show/hide
Query:  LARAAGVVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVENAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHG
        LARAAG VAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQV NAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHG
Subjt:  LARAAGVVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVENAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHG

SwissProt top hitse value%identityAlignment
A4GYV2 50S ribosomal protein L2, chloroplastic4.0e-3797.5Show/hide
Query:  LARAAGVVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVENAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHG
        LARAAG VAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQV NAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHG
Subjt:  LARAAGVVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVENAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHG

A4QK59 50S ribosomal protein L2, chloroplastic1.2e-3696.25Show/hide
Query:  LARAAGVVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVENAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHG
        LARAAG VAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQV N GVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHG
Subjt:  LARAAGVVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVENAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHG

Q14F95 50S ribosomal protein L2-A, chloroplastic4.0e-3797.5Show/hide
Query:  LARAAGVVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVENAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHG
        LARAAG VAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQV NAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHG
Subjt:  LARAAGVVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVENAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHG

Q14FB6 50S ribosomal protein L2-B, chloroplastic4.0e-3797.5Show/hide
Query:  LARAAGVVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVENAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHG
        LARAAG VAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQV NAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHG
Subjt:  LARAAGVVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVENAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHG

Q4VZK5 50S ribosomal protein L2, chloroplastic4.0e-3797.5Show/hide
Query:  LARAAGVVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVENAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHG
        LARAAG VAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQV NAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHG
Subjt:  LARAAGVVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVENAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHG

Arabidopsis top hitse value%identityAlignment
AT2G44065.1 Ribosomal protein L2 family1.5e-1550.62Show/hide
Query:  LARAAGVVAKLIAKEGKSATL-KLPSGEVRLISKNCSATVGQVENAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHG
        + RAAG  AK++ +  K   L KLPSG+ + I+  C AT+G V N     K L +AG   WLG RP VRGV MNP DHPHG
Subjt:  LARAAGVVAKLIAKEGKSATL-KLPSGEVRLISKNCSATVGQVENAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHG

AT2G44065.2 Ribosomal protein L2 family1.5e-1550.62Show/hide
Query:  LARAAGVVAKLIAKEGKSATL-KLPSGEVRLISKNCSATVGQVENAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHG
        + RAAG  AK++ +  K   L KLPSG+ + I+  C AT+G V N     K L +AG   WLG RP VRGV MNP DHPHG
Subjt:  LARAAGVVAKLIAKEGKSATL-KLPSGEVRLISKNCSATVGQVENAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHG

AT3G51190.1 Ribosomal protein L2 family1.0e-1145.05Show/hide
Query:  LARAAGVVAKLIAKEGKSAT--LKLPSGEVRLISKNCSATVGQVENAGVNQKSLGRAGS---------KCWLGKRPVVRGVVMNPVDHPHG
        LARA+G  A +IA   +S T  +KLPSG  +++   C A +GQV   G  +K L +AG+          CW    PVVRGV MNPV+HPHG
Subjt:  LARAAGVVAKLIAKEGKSAT--LKLPSGEVRLISKNCSATVGQVENAGVNQKSLGRAGS---------KCWLGKRPVVRGVVMNPVDHPHG

ATCG00830.1 ribosomal protein L28.3e-3896.25Show/hide
Query:  LARAAGVVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVENAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHG
        LARAAG VAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQV N GVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHG
Subjt:  LARAAGVVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVENAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHG

ATCG01310.1 ribosomal protein L28.3e-3896.25Show/hide
Query:  LARAAGVVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVENAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHG
        LARAAG VAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQV N GVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHG
Subjt:  LARAAGVVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVENAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTAGCTAGAGCAGCAGGTGTTGTAGCGAAACTGATTGCAAAAGAGGGGAAATCGGCCACATTAAAATTACCTTCTGGGGAGGTCCGTTTGATATCCAAAAATTGCTCAGC
AACAGTCGGACAAGTGGAGAATGCTGGGGTAAACCAGAAAAGTTTGGGTAGAGCCGGATCTAAATGTTGGCTAGGTAAGCGTCCTGTAGTAAGAGGAGTAGTTATGAACC
CTGTAGACCATCCCCATGGG
mRNA sequenceShow/hide mRNA sequence
TTAGCTAGAGCAGCAGGTGTTGTAGCGAAACTGATTGCAAAAGAGGGGAAATCGGCCACATTAAAATTACCTTCTGGGGAGGTCCGTTTGATATCCAAAAATTGCTCAGC
AACAGTCGGACAAGTGGAGAATGCTGGGGTAAACCAGAAAAGTTTGGGTAGAGCCGGATCTAAATGTTGGCTAGGTAAGCGTCCTGTAGTAAGAGGAGTAGTTATGAACC
CTGTAGACCATCCCCATGGG
Protein sequenceShow/hide protein sequence
LARAAGVVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVENAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHG