CuGenDBv2

Gene ID	MC03g0600
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	twinkle homolog protein, chloroplastic/mitochondrial isoform X1
Genome location	MC03:12751752..12756022
RNA-Seq Expression	MC03g0600
Synteny	MC03g0600
Gene Ontology terms	GO:0006260 - DNA replication (biological process) GO:0006353 - DNA-templated transcription, termination (biological process) GO:0006355 - regulation of transcription, DNA-templated (biological process) GO:0032508 - DNA duplex unwinding (biological process) GO:0003690 - double-stranded DNA binding (molecular function) GO:0003697 - single-stranded DNA binding (molecular function) GO:0005524 - ATP binding (molecular function) GO:0043139 - 5'-3' DNA helicase activity (molecular function)
InterPro domains	IPR027032 - Twinkle-like protein

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7019451.1 Twinkle-like protein, chloroplastic/mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma]

7.06e-124

76.71

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Query:  MRFLHHNQCFHSPLTKLSSLSSSFNLMGSIPLCKSPSLVFLSHISSSSYCSW-QRNFLYRTNLLLHGSFPVQPMSPRKPFSMKTNGVSPFTSHANVPGPP
        MRFLHHNQC +S  +KLSSLSSSF LMGS  LCKS SL+FLS +SSSS  S  QR FLY++N +LHGSFPV+PMS  K FSMK NGVS FTSHANVP PP
Subjt:  MRFLHHNQCFHSPLTKLSSLSSSFNLMGSIPLCKSPSLVFLSHISSSSYCSW-QRNFLYRTNLLLHGSFPVQPMSPRKPFSMKTNGVSPFTSHANVPGPP

Query:  AFLENPLDEGLSSTQLNVLRKKLEELNINTESCVPGQTNHLLCPMCKGGDSGERSLSLYISEDGGAAVWICFCAKCGWKGRTLAFADGRSSYGSLGQVAI
         F+ENPL E LS T+LN+L+KKL+EL+I+ E CVPGQTNHLLCPMCKGGDSGER+LSL+ISEDGGAAVW+CF AKCGWKGRTLAFADGRSS+   GQ+ +
Subjt:  AFLENPLDEGLSSTQLNVLRKKLEELNINTESCVPGQTNHLLCPMCKGGDSGERSLSLYISEDGGAAVWICFCAKCGWKGRTLAFADGRSSYGSLGQVAI

Query:  NKKKRKITAESLQLEPLCDELVAYFAERLISKNTLLRNSVMQKRSDNQV
         +KKRKIT ESLQLEPLCDELVAYFAERLISK+TLLRNSVMQKRS+NQ+
Subjt:  NKKKRKITAESLQLEPLCDELVAYFAERLISKNTLLRNSVMQKRSDNQV

XP_022142394.1 twinkle homolog protein, chloroplastic/mitochondrial isoform X1 [Momordica charantia]

1.24e-156

93.15

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Query:  MRFLHHNQCFHSPLTKLSSLSSSFNLMGSIPLCKSPSLVFLSHISSSSYCSWQRNFLYRTNLLLHGSFPVQPMSPRKPFSMKTNGVSPFTSHANVPGPPA
        MRFLHHNQCFHSP TKLSSLSSSFNLMGSIPLCKS SLVFLSHISSSSYCS QRNFLYRTNLLLHGSFPVQ MSPRK FSMKTNGVSPFTSHANVPGPP 
Subjt:  MRFLHHNQCFHSPLTKLSSLSSSFNLMGSIPLCKSPSLVFLSHISSSSYCSWQRNFLYRTNLLLHGSFPVQPMSPRKPFSMKTNGVSPFTSHANVPGPPA

Query:  FLENPLDEGLSSTQLNVLRKKLEELNINTESCVPGQTNHLLCPMCKGGDSGERSLSLYISEDGGAAVWICFCAKCGWKGRTLAFADGRSSYGSLGQVAIN
              DEGLSSTQLNVLRKKLEELN+NTESCVPGQTNHLLCPMCKGGDSGERSLSLYISEDGGAAVWICF AKCGWKGRTLAFADGRSSYGSLGQVA+N
Subjt:  FLENPLDEGLSSTQLNVLRKKLEELNINTESCVPGQTNHLLCPMCKGGDSGERSLSLYISEDGGAAVWICFCAKCGWKGRTLAFADGRSSYGSLGQVAIN

Query:  KKKRKITAESLQLEPLCDELVAYFAERLISKNTLLRNSVMQKRSDNQV
        KKKRKIT ESLQLEPLCDELVAYFAERLISKNTLLRNSVMQKRSDNQ+
Subjt:  KKKRKITAESLQLEPLCDELVAYFAERLISKNTLLRNSVMQKRSDNQV

XP_022142535.1 transcription termination factor MTERF15, mitochondrial-like isoform X1 [Momordica charantia]

2.07e-146

96.8

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Query:  MRFLHHNQCFHSPLTKLSSLSSSFNLMGSIPLCKSPSLVFLSHISSSSYCSWQRNFLYRTNLLLHGSFPVQPMSPRKPFSMKTNGVSPFTSHANVPGPPA
        MRFLHHNQCFHSPLTKLSSLSSSFNLMGSIPLCKSPSLVFLSHISSSSYCSWQRNFLYRTNLLLHGSFPVQPMSPRKPFSMKTNGVSPFTSHANVPGPP 
Subjt:  MRFLHHNQCFHSPLTKLSSLSSSFNLMGSIPLCKSPSLVFLSHISSSSYCSWQRNFLYRTNLLLHGSFPVQPMSPRKPFSMKTNGVSPFTSHANVPGPPA

Query:  FLENPLDEGLSSTQLNVLRKKLEELNINTESCVPGQTNHLLCPMCKGGDSGERSLSLYISEDGGAAVWICFCAKCGWKGRTLAFADGRSSYGSLGQVAIN
              DEGLSSTQLNVLRKKLEELNINTESCVPGQTNHLLCPMCKGGDSGERSLSLYISEDGGAAVWICFCAKCGWKGRTLAFADGRSSYGSLGQVAIN
Subjt:  FLENPLDEGLSSTQLNVLRKKLEELNINTESCVPGQTNHLLCPMCKGGDSGERSLSLYISEDGGAAVWICFCAKCGWKGRTLAFADGRSSYGSLGQVAIN

Query:  KKKRKITAESLQLEPLCDE
        KKKRKITAESLQLEPLCDE
Subjt:  KKKRKITAESLQLEPLCDE

XP_022927085.1 twinkle homolog protein, chloroplastic/mitochondrial isoform X2 [Cucurbita moschata]

9.09e-125

76.4

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Query:  MRFLHHNQCFHSPLTKLSSLSSSFNLMGSIPLCKSPSLVFLSHISSSSYCSW--QRNFLYRTNLLLHGSFPVQPMSPRKPFSMKTNGVSPFTSHANVPGP
        MRFLHHNQC +S  +KLSSLSSSF LMGS  LCKS SL+FLS +SSSS  S   QR FLY++N +LHGSFPV+PMS  K FSMK NGVS FTSHANVP P
Subjt:  MRFLHHNQCFHSPLTKLSSLSSSFNLMGSIPLCKSPSLVFLSHISSSSYCSW--QRNFLYRTNLLLHGSFPVQPMSPRKPFSMKTNGVSPFTSHANVPGP

Query:  PAFLENPLDEGLSSTQLNVLRKKLEELNINTESCVPGQTNHLLCPMCKGGDSGERSLSLYISEDGGAAVWICFCAKCGWKGRTLAFADGRSSYGSLGQVA
        P F+ENPL E LS T+LN+L+KKL+EL+I+ E CVPGQTNHLLCPMCKGGDSGER+LSL+ISEDGGAAVW+CF AKCGWKGRTLAFADGRSS+   GQ+ 
Subjt:  PAFLENPLDEGLSSTQLNVLRKKLEELNINTESCVPGQTNHLLCPMCKGGDSGERSLSLYISEDGGAAVWICFCAKCGWKGRTLAFADGRSSYGSLGQVA

Query:  INKKKRKITAESLQLEPLCDELVAYFAERLISKNTLLRNSVMQKRSDNQV
        + +KKRKIT ESLQLEPLCDELVAYFAERLISK+TLLRNSVMQKRS+NQ+
Subjt:  INKKKRKITAESLQLEPLCDELVAYFAERLISKNTLLRNSVMQKRSDNQV

XP_038894379.1 twinkle homolog protein, chloroplastic/mitochondrial [Benincasa hispida]

6.98e-134

80.65

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Query:  MRFLHHNQCFHSPLTKLSSLSSSFNLMGSIPLCKSPSLVFLSHISSSSYCSWQRNFLYRTNLLLHGSFPVQPMSPRKPFSMKTNGVSPFTSHANVPGPPA
        MRFLHHNQC ++P + LSS SSSFNLMG+IPLCKS SLV LSH+SSSS  S  + FLYR+N LLHG FPV+PMS  KPFSMK NGVS FTSH+NVP PPA
Subjt:  MRFLHHNQCFHSPLTKLSSLSSSFNLMGSIPLCKSPSLVFLSHISSSSYCSWQRNFLYRTNLLLHGSFPVQPMSPRKPFSMKTNGVSPFTSHANVPGPPA

Query:  FLENPLDEGLSSTQLNVLRKKLEELNINTESCVPGQTNHLLCPMCKGGDSGERSLSLYISEDGGAAVWICFCAKCGWKGRTLAFADGRSSYGSLGQVAIN
        FLENPLDE LSST LNVLRKKL+EL+I+TESCVPGQTNHLLCPMCKGGDSGER  SLYISEDGGAA+W+CF AKCGWKGRTLAFADG SSY +LGQVA+ 
Subjt:  FLENPLDEGLSSTQLNVLRKKLEELNINTESCVPGQTNHLLCPMCKGGDSGERSLSLYISEDGGAAVWICFCAKCGWKGRTLAFADGRSSYGSLGQVAIN

Query:  KKKRKITAESLQLEPLCDELVAYFAERLISKNTLLRNSVMQKRSDNQV
        + KRKIT ESLQLEPLCDELVAYFAERLISKNTLLRNSVMQKR +NQ+
Subjt:  KKKRKITAESLQLEPLCDELVAYFAERLISKNTLLRNSVMQKRSDNQV

TrEMBL top hits

e value

%identity

Alignment

A0A6J1CL75 transcription termination factor MTERF15, mitochondrial-like isoform X1

1.00e-146

96.8

Show/hide

Query:  MRFLHHNQCFHSPLTKLSSLSSSFNLMGSIPLCKSPSLVFLSHISSSSYCSWQRNFLYRTNLLLHGSFPVQPMSPRKPFSMKTNGVSPFTSHANVPGPPA
        MRFLHHNQCFHSPLTKLSSLSSSFNLMGSIPLCKSPSLVFLSHISSSSYCSWQRNFLYRTNLLLHGSFPVQPMSPRKPFSMKTNGVSPFTSHANVPGPP 
Subjt:  MRFLHHNQCFHSPLTKLSSLSSSFNLMGSIPLCKSPSLVFLSHISSSSYCSWQRNFLYRTNLLLHGSFPVQPMSPRKPFSMKTNGVSPFTSHANVPGPPA

Query:  FLENPLDEGLSSTQLNVLRKKLEELNINTESCVPGQTNHLLCPMCKGGDSGERSLSLYISEDGGAAVWICFCAKCGWKGRTLAFADGRSSYGSLGQVAIN
              DEGLSSTQLNVLRKKLEELNINTESCVPGQTNHLLCPMCKGGDSGERSLSLYISEDGGAAVWICFCAKCGWKGRTLAFADGRSSYGSLGQVAIN
Subjt:  FLENPLDEGLSSTQLNVLRKKLEELNINTESCVPGQTNHLLCPMCKGGDSGERSLSLYISEDGGAAVWICFCAKCGWKGRTLAFADGRSSYGSLGQVAIN

Query:  KKKRKITAESLQLEPLCDE
        KKKRKITAESLQLEPLCDE
Subjt:  KKKRKITAESLQLEPLCDE

A0A6J1CLF6 twinkle homolog protein, chloroplastic/mitochondrial isoform X1

6.03e-157

93.15

Show/hide

Query:  MRFLHHNQCFHSPLTKLSSLSSSFNLMGSIPLCKSPSLVFLSHISSSSYCSWQRNFLYRTNLLLHGSFPVQPMSPRKPFSMKTNGVSPFTSHANVPGPPA
        MRFLHHNQCFHSP TKLSSLSSSFNLMGSIPLCKS SLVFLSHISSSSYCS QRNFLYRTNLLLHGSFPVQ MSPRK FSMKTNGVSPFTSHANVPGPP 
Subjt:  MRFLHHNQCFHSPLTKLSSLSSSFNLMGSIPLCKSPSLVFLSHISSSSYCSWQRNFLYRTNLLLHGSFPVQPMSPRKPFSMKTNGVSPFTSHANVPGPPA

Query:  FLENPLDEGLSSTQLNVLRKKLEELNINTESCVPGQTNHLLCPMCKGGDSGERSLSLYISEDGGAAVWICFCAKCGWKGRTLAFADGRSSYGSLGQVAIN
              DEGLSSTQLNVLRKKLEELN+NTESCVPGQTNHLLCPMCKGGDSGERSLSLYISEDGGAAVWICF AKCGWKGRTLAFADGRSSYGSLGQVA+N
Subjt:  FLENPLDEGLSSTQLNVLRKKLEELNINTESCVPGQTNHLLCPMCKGGDSGERSLSLYISEDGGAAVWICFCAKCGWKGRTLAFADGRSSYGSLGQVAIN

Query:  KKKRKITAESLQLEPLCDELVAYFAERLISKNTLLRNSVMQKRSDNQV
        KKKRKIT ESLQLEPLCDELVAYFAERLISKNTLLRNSVMQKRSDNQ+
Subjt:  KKKRKITAESLQLEPLCDELVAYFAERLISKNTLLRNSVMQKRSDNQV

A0A6J1EH06 twinkle homolog protein, chloroplastic/mitochondrial isoform X1

4.95e-124

76.4

Show/hide

Query:  MRFLHHNQCFHSPLTKLSSLSSSFNLMGSIPLCKSPSLVFLSHISSSSYCSW--QRNFLYRTNLLLHGSFPVQPMSPRKPFSMKTNGVSPFTSHANVPGP
        MRFLHHNQC +S  +KLSSLSSSF LMGS  LCKS SL+FLS +SSSS  S   QR FLY++N +LHGSFPV+PMS  K FSMK NGVS FTSHANVP P
Subjt:  MRFLHHNQCFHSPLTKLSSLSSSFNLMGSIPLCKSPSLVFLSHISSSSYCSW--QRNFLYRTNLLLHGSFPVQPMSPRKPFSMKTNGVSPFTSHANVPGP

Query:  PAFLENPLDEGLSSTQLNVLRKKLEELNINTESCVPGQTNHLLCPMCKGGDSGERSLSLYISEDGGAAVWICFCAKCGWKGRTLAFADGRSSYGSLGQVA
        P F+ENPL E LS T+LN+L+KKL+EL+I+ E CVPGQTNHLLCPMCKGGDSGER+LSL+ISEDGGAAVW+CF AKCGWKGRTLAFADGRSS+   GQ+ 
Subjt:  PAFLENPLDEGLSSTQLNVLRKKLEELNINTESCVPGQTNHLLCPMCKGGDSGERSLSLYISEDGGAAVWICFCAKCGWKGRTLAFADGRSSYGSLGQVA

Query:  INKKKRKITAESLQLEPLCDELVAYFAERLISKNTLLRNSVMQKRSDNQV
        + +KKRKIT ESLQLEPLCDELVAYFAERLISK+TLLRNSVMQKRS+NQ+
Subjt:  INKKKRKITAESLQLEPLCDELVAYFAERLISKNTLLRNSVMQKRSDNQV

A0A6J1EMW1 twinkle homolog protein, chloroplastic/mitochondrial isoform X2

4.40e-125

76.4

Show/hide

Query:  MRFLHHNQCFHSPLTKLSSLSSSFNLMGSIPLCKSPSLVFLSHISSSSYCSW--QRNFLYRTNLLLHGSFPVQPMSPRKPFSMKTNGVSPFTSHANVPGP
        MRFLHHNQC +S  +KLSSLSSSF LMGS  LCKS SL+FLS +SSSS  S   QR FLY++N +LHGSFPV+PMS  K FSMK NGVS FTSHANVP P
Subjt:  MRFLHHNQCFHSPLTKLSSLSSSFNLMGSIPLCKSPSLVFLSHISSSSYCSW--QRNFLYRTNLLLHGSFPVQPMSPRKPFSMKTNGVSPFTSHANVPGP

Query:  PAFLENPLDEGLSSTQLNVLRKKLEELNINTESCVPGQTNHLLCPMCKGGDSGERSLSLYISEDGGAAVWICFCAKCGWKGRTLAFADGRSSYGSLGQVA
        P F+ENPL E LS T+LN+L+KKL+EL+I+ E CVPGQTNHLLCPMCKGGDSGER+LSL+ISEDGGAAVW+CF AKCGWKGRTLAFADGRSS+   GQ+ 
Subjt:  PAFLENPLDEGLSSTQLNVLRKKLEELNINTESCVPGQTNHLLCPMCKGGDSGERSLSLYISEDGGAAVWICFCAKCGWKGRTLAFADGRSSYGSLGQVA

Query:  INKKKRKITAESLQLEPLCDELVAYFAERLISKNTLLRNSVMQKRSDNQV
        + +KKRKIT ESLQLEPLCDELVAYFAERLISK+TLLRNSVMQKRS+NQ+
Subjt:  INKKKRKITAESLQLEPLCDELVAYFAERLISKNTLLRNSVMQKRSDNQV

A0A6J1KLG2 twinkle homolog protein, chloroplastic/mitochondrial

1.40e-123

76.8

Show/hide

Query:  MRFLHHNQCFHSPLTKLSSLSSSFNLMGSIPLCKSPSLVFLSHISSSSYCSW--QRNFLYRTNLLLHGSFPVQPMSPRKPFSMKTNGVSPFTSHANVPGP
        MRFLHHNQC  S  +KLSSLSSSF LMGS  LCKS SL+FLS +SSSS  S   QR FLY++N +LHGSFPV+PMS  K FSMK NGVS FTSHANVP P
Subjt:  MRFLHHNQCFHSPLTKLSSLSSSFNLMGSIPLCKSPSLVFLSHISSSSYCSW--QRNFLYRTNLLLHGSFPVQPMSPRKPFSMKTNGVSPFTSHANVPGP

Query:  PAFLENPLDEGLSSTQLNVLRKKLEELNINTESCVPGQTNHLLCPMCKGGDSGERSLSLYISEDGGAAVWICFCAKCGWKGRTLAFADGRSSYGSLGQVA
        PAF+ENPL E LS T+LN+L+KKL+EL+I+ E CVPGQTNHLLCPMCKGGDSGER+LSL ISEDGGAAVW+CF AKCGWKGRTLAFADGR S+ S GQ+ 
Subjt:  PAFLENPLDEGLSSTQLNVLRKKLEELNINTESCVPGQTNHLLCPMCKGGDSGERSLSLYISEDGGAAVWICFCAKCGWKGRTLAFADGRSSYGSLGQVA

Query:  INKKKRKITAESLQLEPLCDELVAYFAERLISKNTLLRNSVMQKRSDNQV
        + +KKRKIT ESLQLEPLCDELVAYFAERLISK+TLLRNSVMQKRS+NQ+
Subjt:  INKKKRKITAESLQLEPLCDELVAYFAERLISKNTLLRNSVMQKRSDNQV

SwissProt top hits

e value

%identity

Alignment

B5X582 Twinkle homolog protein, chloroplastic/mitochondrial

7.3e-37

40.48

Show/hide

Query:  MRFLHHNQCFHSPLTKLSSLSSSFN-LMGS---IPLCKSPSLVFLSHISSSSYCSWQRNFLYRTNLLLHGSFPVQPMSPRKPFSMKTNGVSPFTSHANVP
        MRFL        P      LS S + LMGS   +  C  PS  F S+ SS SY S ++  +   +         +P+S   P+  +TNG+S + S   VP
Subjt:  MRFLHHNQCFHSPLTKLSSLSSSFN-LMGS---IPLCKSPSLVFLSHISSSSYCSWQRNFLYRTNLLLHGSFPVQPMSPRKPFSMKTNGVSPFTSHANVP

Query:  GPPAFLENPLDEGLSSTQLNVLRKKLEELNINTESCVPGQTNHLLCPMCKGGDSGERSLSLYISEDGGAAVWICFCAKCGWKGRTLAFADGRSSYGSLGQ
          P   E   D+ +  ++L  LR+KL E  ++ E+C PGQ + L+CP C+GG+SGE+SLSL+I+ DG +A W CF  KCG KG        R+  G    
Subjt:  GPPAFLENPLDEGLSSTQLNVLRKKLEELNINTESCVPGQTNHLLCPMCKGGDSGERSLSLYISEDGGAAVWICFCAKCGWKGRTLAFADGRSSYGSLGQ

Query:  VAINKKKRKITAESLQLEPLCDELVAYFAERLISKNTLLRNSVMQKRSDNQV
          I K +RKIT E ++LEPLCDE+  YFA R IS+ TL RN VMQKR  +++
Subjt:  VAINKKKRKITAESLQLEPLCDELVAYFAERLISKNTLLRNSVMQKRSDNQV

F4I6E6 Primase homolog protein

1.5e-26

43.18

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Query:  MSPRKPFSMKTNGVSPFTSHANVPGPPAFLENPLDEGLSSTQLNVLRKKLEELNINTESCVPGQTNHLLCPMCKGGDSGERSLSLYISEDGGAAVWICFC
        MS   P    TNG S  +S   VP      E    + +  ++L  L +KL E  I+ ++C PG  + L+CP C+ GDSGE+SL+LYI  DG +A W C  
Subjt:  MSPRKPFSMKTNGVSPFTSHANVPGPPAFLENPLDEGLSSTQLNVLRKKLEELNINTESCVPGQTNHLLCPMCKGGDSGERSLSLYISEDGGAAVWICFC

Query:  AKCGWKGRTLAFADGRSSYGSLGQVAINKKKRKITAESLQLEPLCDELVAYFAERLISKNTLLRNSVMQKRSDNQV
         KCG KG  +   DG+     + +  I K +RKIT ES++LEPLCDE+  +FA R IS  TL RN VMQKR D+++
Subjt:  AKCGWKGRTLAFADGRSSYGSLGQVAINKKKRKITAESLQLEPLCDELVAYFAERLISKNTLLRNSVMQKRSDNQV

Arabidopsis top hits

e value

%identity

Alignment

AT1G30660.1 nucleic acid binding;nucleic acid binding

1.1e-27

43.18

Show/hide

Query:  MSPRKPFSMKTNGVSPFTSHANVPGPPAFLENPLDEGLSSTQLNVLRKKLEELNINTESCVPGQTNHLLCPMCKGGDSGERSLSLYISEDGGAAVWICFC
        MS   P    TNG S  +S   VP      E    + +  ++L  L +KL E  I+ ++C PG  + L+CP C+ GDSGE+SL+LYI  DG +A W C  
Subjt:  MSPRKPFSMKTNGVSPFTSHANVPGPPAFLENPLDEGLSSTQLNVLRKKLEELNINTESCVPGQTNHLLCPMCKGGDSGERSLSLYISEDGGAAVWICFC

Query:  AKCGWKGRTLAFADGRSSYGSLGQVAINKKKRKITAESLQLEPLCDELVAYFAERLISKNTLLRNSVMQKRSDNQV
         KCG KG  +   DG+     + +  I K +RKIT ES++LEPLCDE+  +FA R IS  TL RN VMQKR D+++
Subjt:  AKCGWKGRTLAFADGRSSYGSLGQVAINKKKRKITAESLQLEPLCDELVAYFAERLISKNTLLRNSVMQKRSDNQV

AT1G30680.1 toprim domain-containing protein

5.2e-38

40.48

Show/hide

Query:  MRFLHHNQCFHSPLTKLSSLSSSFN-LMGS---IPLCKSPSLVFLSHISSSSYCSWQRNFLYRTNLLLHGSFPVQPMSPRKPFSMKTNGVSPFTSHANVP
        MRFL        P      LS S + LMGS   +  C  PS  F S+ SS SY S ++  +   +         +P+S   P+  +TNG+S + S   VP
Subjt:  MRFLHHNQCFHSPLTKLSSLSSSFN-LMGS---IPLCKSPSLVFLSHISSSSYCSWQRNFLYRTNLLLHGSFPVQPMSPRKPFSMKTNGVSPFTSHANVP

Query:  GPPAFLENPLDEGLSSTQLNVLRKKLEELNINTESCVPGQTNHLLCPMCKGGDSGERSLSLYISEDGGAAVWICFCAKCGWKGRTLAFADGRSSYGSLGQ
          P   E   D+ +  ++L  LR+KL E  ++ E+C PGQ + L+CP C+GG+SGE+SLSL+I+ DG +A W CF  KCG KG        R+  G    
Subjt:  GPPAFLENPLDEGLSSTQLNVLRKKLEELNINTESCVPGQTNHLLCPMCKGGDSGERSLSLYISEDGGAAVWICFCAKCGWKGRTLAFADGRSSYGSLGQ

Query:  VAINKKKRKITAESLQLEPLCDELVAYFAERLISKNTLLRNSVMQKRSDNQV
          I K +RKIT E ++LEPLCDE+  YFA R IS+ TL RN VMQKR  +++
Subjt:  VAINKKKRKITAESLQLEPLCDELVAYFAERLISKNTLLRNSVMQKRSDNQV

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCGTTTTCTTCACCACAATCAGTGTTTCCATAGCCCCCTCACCAAGCTCTCTTCCCTTTCGTCCTCATTCAATCTAATGGGTTCCATTCCCTTGTGCAAGTCCCCTTC
TCTGGTGTTCCTGTCTCACATTTCTTCTTCTTCTTATTGTTCTTGGCAGAGGAATTTCCTGTACAGAACCAATCTTCTTCTCCATGGTTCATTTCCTGTGCAACCCATGT
CCCCTCGTAAACCCTTTTCCATGAAAACAAATGGGGTCTCTCCTTTTACTTCTCATGCCAATGTTCCCGGGCCCCCAGCCTTTTTGGAGAATCCACTAGACGAGGGTTTA
AGCTCGACTCAATTGAATGTTTTGAGGAAAAAATTGGAGGAACTTAACATCAACACCGAATCTTGTGTTCCAGGGCAGACGAACCACCTGCTTTGCCCCATGTGCAAAGG
TGGTGATTCAGGGGAAAGGTCCTTATCCCTATATATCTCAGAAGATGGGGGGGCTGCTGTTTGGATCTGCTTTTGTGCAAAATGTGGTTGGAAAGGCCGCACTCTGGCCT
TTGCTGATGGTCGGTCATCATATGGAAGCTTGGGACAAGTTGCAATTAACAAGAAAAAACGGAAAATTACAGCTGAGAGTCTACAACTTGAACCACTGTGTGACGAGCTG
GTTGCTTACTTTGCTGAGCGACTGATTTCCAAAAACACGTTGTTAAGAAATTCTGTTATGCAGAAAAGATCCGATAATCAGGTA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

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MRFLHHNQCFHSPLTKLSSLSSSFNLMGSIPLCKSPSLVFLSHISSSSYCSWQRNFLYRTNLLLHGSFPVQPMSPRKPFSMKTNGVSPFTSHANVPGPPAFLENPLDEGL
SSTQLNVLRKKLEELNINTESCVPGQTNHLLCPMCKGGDSGERSLSLYISEDGGAAVWICFCAKCGWKGRTLAFADGRSSYGSLGQVAINKKKRKITAESLQLEPLCDEL
VAYFAERLISKNTLLRNSVMQKRSDNQV

MC03g0600 (gene) of Bitter gourd (Dali-11) v1 genome