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MC03g0677 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC03g0677
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionCotton fiber protein
Genome locationMC03:13680358..13680882
RNA-Seq ExpressionMC03g0677
SyntenyMC03g0677
Gene Ontology termsNA
InterPro domainsIPR008480 - Protein of unknown function DUF761, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8653186.1 hypothetical protein Csa_020019 [Cucumis sativus]1.15e-3456.12Show/hide
Query:  AFFSSLASLILLSSIFT--FKNLSFSSHLFNSTNFWFFISNALIILIIAADYNRIFSPTQNKRLDFYEDYVSSNQNQTQI---LQSSSLAVIVDEERETP
        AFFSSL  L+ +  IF   FKNLSFSS LFNST FWFFISN LI  IIA DY  +FS +Q+K    YEDY  S  N       LQ+SSL V+ DE+RETP
Subjt:  AFFSSLASLILLSSIFT--FKNLSFSSHLFNSTNFWFFISNALIILIIAADYNRIFSPTQNKRLDFYEDYVSSNQNQTQI---LQSSSLAVIVDEERETP

Query:  EEKLQIVVGRRDFGSCQ-----------RSKSEKPKR--------KTMG-RRSESVKYEAKG--EGNEFSKMTDEELNRRVEEFIQRINRQMRLQS
        +EKL+ VV  +   S             R KSEKPKR        K MG RRSESVK E K   + NEF+KMTDEELNRRVEEFIQR N+QMRLQ+
Subjt:  EEKLQIVVGRRDFGSCQ-----------RSKSEKPKR--------KTMG-RRSESVKYEAKG--EGNEFSKMTDEELNRRVEEFIQRINRQMRLQS

XP_022927149.1 uncharacterized protein LOC111434084 [Cucurbita moschata]1.89e-3556.15Show/hide
Query:  AFFSSLASLILLSSIFTFKNLSFSSHLFNSTNFWFFISNALIILIIAADYNRIFSPTQNKRLDFYEDYVSSNQNQTQILQSSSLAVIVDEERETPEEKLQ
        AFFSSL  L+LLS    FKNLSFSS LFNST FWFFISNALI  IIAADY   FS +Q KR   YE Y   N   T     +S  V+ DE+RE P+  LQ
Subjt:  AFFSSLASLILLSSIFTFKNLSFSSHLFNSTNFWFFISNALIILIIAADYNRIFSPTQNKRLDFYEDYVSSNQNQTQILQSSSLAVIVDEERETPEEKLQ

Query:  IVVGRR----------DFGSCQRSKSEKPKR-------KTMGRRSESVKYEAKG-EGNEFSKMTDEELNRRVEEFIQRINRQMRLQS
          V  R             + +RSKSEKPKR       K M +RSES KYE K  E NE+SKMTDEELNRRVEEFIQR N QMRL++
Subjt:  IVVGRR----------DFGSCQRSKSEKPKR-------KTMGRRSESVKYEAKG-EGNEFSKMTDEELNRRVEEFIQRINRQMRLQS

XP_023001467.1 uncharacterized protein LOC111495593 [Cucurbita maxima]2.67e-3556.15Show/hide
Query:  AFFSSLASLILLSSIFTFKNLSFSSHLFNSTNFWFFISNALIILIIAADYNRIFSPTQNKRLDFYEDYVSSNQNQTQILQSSSLAVIVDEERETPEEKLQ
        AFFSSL  L LLS    FKNLSFSS LFNST FWFFISN LI  IIAADY   FS +Q KR  FYE Y   N   T     +S  V+ +E+RE P+  LQ
Subjt:  AFFSSLASLILLSSIFTFKNLSFSSHLFNSTNFWFFISNALIILIIAADYNRIFSPTQNKRLDFYEDYVSSNQNQTQILQSSSLAVIVDEERETPEEKLQ

Query:  IVVGRR----------DFGSCQRSKSEKPKR-------KTMGRRSESVKYEAKG-EGNEFSKMTDEELNRRVEEFIQRINRQMRLQS
         +V  R             + QRSKSEKPKR       K M +RSES KYE K  E NE+SKMTDEELNRRVEEFIQR N QMRL++
Subjt:  IVVGRR----------DFGSCQRSKSEKPKR-------KTMGRRSESVKYEAKG-EGNEFSKMTDEELNRRVEEFIQRINRQMRLQS

XP_023520225.1 uncharacterized protein LOC111783530 [Cucurbita pepo subsp. pepo]3.54e-3354.01Show/hide
Query:  AFFSSLASLILLSSIFTFKNLSFSSHLFNSTNFWFFISNALIILIIAADYNRIFSPTQNKRLDFYEDYVSSNQNQTQILQSSSLAVIVDEERETPEEKLQ
        AFFSSL  L+    IF  KNLSFSS LFNST FWFFISNALI  IIAADY   FS TQ KR   YE Y   N   T   + +S  V+ DE+RE P+  L+
Subjt:  AFFSSLASLILLSSIFTFKNLSFSSHLFNSTNFWFFISNALIILIIAADYNRIFSPTQNKRLDFYEDYVSSNQNQTQILQSSSLAVIVDEERETPEEKLQ

Query:  IVVGRR----------DFGSCQRSKSEKPKR-------KTMGRRSESVKYEAKG-EGNEFSKMTDEELNRRVEEFIQRINRQMRLQS
          V  R             + +RSKSEKPKR       K M +R ES  YE K  E NE+SKMTDEELNRRVEEFIQR N QMRL++
Subjt:  IVVGRR----------DFGSCQRSKSEKPKR-------KTMGRRSESVKYEAKG-EGNEFSKMTDEELNRRVEEFIQRINRQMRLQS

XP_038877172.1 uncharacterized protein LOC120069472 [Benincasa hispida]7.96e-3956.38Show/hide
Query:  AFFSSLASLILLSSIFT--FKNLSFSSHLFNSTNFWFFISNALIILIIAADYNRIFSPTQNKRLDFYEDYVSSNQNQTQILQSSSLAVIVDEERETPEEK
        AFFSSL  L+ +  IF   FKNLS  S LFNST FWFFISN LI  IIA DY  +FS  Q+K    YED+  SN         SS  V+ DE++ET  EK
Subjt:  AFFSSLASLILLSSIFT--FKNLSFSSHLFNSTNFWFFISNALIILIIAADYNRIFSPTQNKRLDFYEDYVSSNQNQTQILQSSSLAVIVDEERETPEEK

Query:  LQIVVGRRDFGS---------CQRSKSEKPK-------RKTMGRRSESVKYEAKG-EGNEFSKMTDEELNRRVEEFIQRINRQMRLQS
        L++VV  R   S         C+R KSEKPK        K MG+RSESVKYEAK  E NEF KMTDEELNRRVEEFIQR NRQMRLQ+
Subjt:  LQIVVGRRDFGS---------CQRSKSEKPK-------RKTMGRRSESVKYEAKG-EGNEFSKMTDEELNRRVEEFIQRINRQMRLQS

TrEMBL top hitse value%identityAlignment
A0A0A0M033 Uncharacterized protein2.11e-2754.27Show/hide
Query:  TNFWFFISNALIILIIAADYNRIFSPTQNKRLDFYEDYVSSNQNQTQI---LQSSSLAVIVDEERETPEEKLQIVVGRRDFGSCQ-----------RSKS
        T FWFFISN LI  IIA DY  +FS +Q+K    YEDY  S  N       LQ+SSL V+ DE+RETP+EKL+ VV  +   S             R KS
Subjt:  TNFWFFISNALIILIIAADYNRIFSPTQNKRLDFYEDYVSSNQNQTQI---LQSSSLAVIVDEERETPEEKLQIVVGRRDFGSCQ-----------RSKS

Query:  EKPKR--------KTMG-RRSESVKYEAKG--EGNEFSKMTDEELNRRVEEFIQRINRQMRLQS
        EKPKR        K MG RRSESVK E K   + NEF+KMTDEELNRRVEEFIQR N+QMRLQ+
Subjt:  EKPKR--------KTMG-RRSESVKYEAKG--EGNEFSKMTDEELNRRVEEFIQRINRQMRLQS

A0A2N9GT34 Uncharacterized protein3.10e-2144.68Show/hide
Query:  AKGAAFFSSLASLILLSSIFTFKNLSFSSHLFNSTNFWFFISNALIILIIAADYNRIFSPTQNKRLDFYEDYVSSNQ--NQTQILQS--SSLAVIVDEER
        A G +F++ L S+ +  SI    NLS  S LFN+T FWFF+SN LI LIIA DY   +S ++ K+ DFY++YV   Q  N    +     ++  +V+  +
Subjt:  AKGAAFFSSLASLILLSSIFTFKNLSFSSHLFNSTNFWFFISNALIILIIAADYNRIFSPTQNKRLDFYEDYVSSNQ--NQTQILQS--SSLAVIVDEER

Query:  ETPEEKLQIVVGRRDFGSCQRSKSEKPKRKTMG-------RRSESVKYEAKG--EGNEFSKMTDEELNRRVEEFIQRINRQMRLQSSN
        E  +EK+Q    RR       SKSEK KR  +        R SE+ K+E     E NEFS M+DEELNRRVEEFIQR NRQ+RLQ+ N
Subjt:  ETPEEKLQIVVGRRDFGSCQRSKSEKPKRKTMG-------RRSESVKYEAKG--EGNEFSKMTDEELNRRVEEFIQRINRQMRLQSSN

A0A6J1EH73 uncharacterized protein LOC1114340849.16e-3656.15Show/hide
Query:  AFFSSLASLILLSSIFTFKNLSFSSHLFNSTNFWFFISNALIILIIAADYNRIFSPTQNKRLDFYEDYVSSNQNQTQILQSSSLAVIVDEERETPEEKLQ
        AFFSSL  L+LLS    FKNLSFSS LFNST FWFFISNALI  IIAADY   FS +Q KR   YE Y   N   T     +S  V+ DE+RE P+  LQ
Subjt:  AFFSSLASLILLSSIFTFKNLSFSSHLFNSTNFWFFISNALIILIIAADYNRIFSPTQNKRLDFYEDYVSSNQNQTQILQSSSLAVIVDEERETPEEKLQ

Query:  IVVGRR----------DFGSCQRSKSEKPKR-------KTMGRRSESVKYEAKG-EGNEFSKMTDEELNRRVEEFIQRINRQMRLQS
          V  R             + +RSKSEKPKR       K M +RSES KYE K  E NE+SKMTDEELNRRVEEFIQR N QMRL++
Subjt:  IVVGRR----------DFGSCQRSKSEKPKR-------KTMGRRSESVKYEAKG-EGNEFSKMTDEELNRRVEEFIQRINRQMRLQS

A0A6J1KGM0 uncharacterized protein LOC1114955931.29e-3556.15Show/hide
Query:  AFFSSLASLILLSSIFTFKNLSFSSHLFNSTNFWFFISNALIILIIAADYNRIFSPTQNKRLDFYEDYVSSNQNQTQILQSSSLAVIVDEERETPEEKLQ
        AFFSSL  L LLS    FKNLSFSS LFNST FWFFISN LI  IIAADY   FS +Q KR  FYE Y   N   T     +S  V+ +E+RE P+  LQ
Subjt:  AFFSSLASLILLSSIFTFKNLSFSSHLFNSTNFWFFISNALIILIIAADYNRIFSPTQNKRLDFYEDYVSSNQNQTQILQSSSLAVIVDEERETPEEKLQ

Query:  IVVGRR----------DFGSCQRSKSEKPKR-------KTMGRRSESVKYEAKG-EGNEFSKMTDEELNRRVEEFIQRINRQMRLQS
         +V  R             + QRSKSEKPKR       K M +RSES KYE K  E NE+SKMTDEELNRRVEEFIQR N QMRL++
Subjt:  IVVGRR----------DFGSCQRSKSEKPKR-------KTMGRRSESVKYEAKG-EGNEFSKMTDEELNRRVEEFIQRINRQMRLQS

A0A7N2LQF9 Uncharacterized protein2.03e-1936.32Show/hide
Query:  AKGAAFFSSLASLILLSSIFTFKNLSFSSHLFNSTNFWFFISNALIILIIAADYNRIFSPTQNKRLDFYEDYVSSNQ-----------------------
        AKG +F++SL S+ +  S+    NLS  S LF +T FWFF+SN LI LIIA DY    S   N++ D Y++YV   Q                       
Subjt:  AKGAAFFSSLASLILLSSIFTFKNLSFSSHLFNSTNFWFFISNALIILIIAADYNRIFSPTQNKRLDFYEDYVSSNQ-----------------------

Query:  ------------NQTQILQSSSLAVIVDEERETPEEKLQIVVGRRDFGSCQRSKSEKPKRKTMGRRSESVKYEA---KGEGNEFSKMTDEELNRRVEEFI
                     + Q+    +L V++  + E P E L+  +  + +   +RSKSE+ KR  +      +   +   K E NEFS M+DEELNRRVEEFI
Subjt:  ------------NQTQILQSSSLAVIVDEERETPEEKLQIVVGRRDFGSCQRSKSEKPKRKTMGRRSESVKYEA---KGEGNEFSKMTDEELNRRVEEFI

Query:  QRINRQMRLQSS
        QR NR++RLQS+
Subjt:  QRINRQMRLQSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G30190.1 unknown protein3.7e-0630.96Show/hide
Query:  IFTFKNLSFSSHLFNSTNFWFFISNALIILIIAADYNRIFSPTQNKRLDFYEDY-VSSNQNQTQILQSSSLAVIV---------------------DEER
        IF    +S SS +F  T   FFISN L ILIIAADY   FS  +++  DFY +Y V++   + +    S + V+                      +EE 
Subjt:  IFTFKNLSFSSHLFNSTNFWFFISNALIILIIAADYNRIFSPTQNKRLDFYEDY-VSSNQNQTQILQSSSLAVIV---------------------DEER

Query:  E---------TPEEKLQIVVG---RRDFGSCQ-----------------------------RSKSEKPKRKTMGRRSESVKYEAKG--------------
        E         +P EK+  VV    +RD  + +                             RSKS+KP+RK +   +E+ K ++ G              
Subjt:  E---------TPEEKLQIVVG---RRDFGSCQ-----------------------------RSKSEKPKRKTMGRRSESVKYEAKG--------------

Query:  -------EGNEFSKMTDEELNRRVEEFIQRINRQMRLQS
               E  EFSK+++EELN+RVEEFIQR NRQ+R QS
Subjt:  -------EGNEFSKMTDEELNRRVEEFIQRINRQMRLQS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCAAAGGGAGCAGCCTTCTTCTCTTCCCTAGCCTCCCTAATTCTTCTCTCCAGTATCTTCACCTTCAAAAACCTCTCTTTTTCATCTCATCTCTTCAACAGCACCAACTT
CTGGTTCTTCATTTCCAACGCCCTCATAATTCTCATCATAGCCGCTGATTATAATCGCATTTTCTCTCCCACCCAAAACAAAAGACTCGATTTTTATGAAGATTACGTAT
CCTCCAATCAAAACCAAACTCAGATACTTCAAAGTTCTTCACTGGCAGTAATAGTTGATGAAGAGAGAGAAACCCCAGAAGAGAAACTGCAAATCGTGGTTGGAAGACGC
GATTTTGGGTCTTGCCAGCGAAGCAAGTCGGAGAAACCCAAGAGAAAAACCATGGGGAGGAGGTCGGAAAGTGTAAAATACGAAGCAAAGGGAGAAGGAAATGAGTTCTC
AAAGATGACAGATGAAGAATTGAATAGAAGGGTGGAGGAATTTATTCAAAGAATTAATAGACAAATGAGACTTCAAAGTTCAAAC
mRNA sequenceShow/hide mRNA sequence
GCAAAGGGAGCAGCCTTCTTCTCTTCCCTAGCCTCCCTAATTCTTCTCTCCAGTATCTTCACCTTCAAAAACCTCTCTTTTTCATCTCATCTCTTCAACAGCACCAACTT
CTGGTTCTTCATTTCCAACGCCCTCATAATTCTCATCATAGCCGCTGATTATAATCGCATTTTCTCTCCCACCCAAAACAAAAGACTCGATTTTTATGAAGATTACGTAT
CCTCCAATCAAAACCAAACTCAGATACTTCAAAGTTCTTCACTGGCAGTAATAGTTGATGAAGAGAGAGAAACCCCAGAAGAGAAACTGCAAATCGTGGTTGGAAGACGC
GATTTTGGGTCTTGCCAGCGAAGCAAGTCGGAGAAACCCAAGAGAAAAACCATGGGGAGGAGGTCGGAAAGTGTAAAATACGAAGCAAAGGGAGAAGGAAATGAGTTCTC
AAAGATGACAGATGAAGAATTGAATAGAAGGGTGGAGGAATTTATTCAAAGAATTAATAGACAAATGAGACTTCAAAGTTCAAAC
Protein sequenceShow/hide protein sequence
AKGAAFFSSLASLILLSSIFTFKNLSFSSHLFNSTNFWFFISNALIILIIAADYNRIFSPTQNKRLDFYEDYVSSNQNQTQILQSSSLAVIVDEERETPEEKLQIVVGRR
DFGSCQRSKSEKPKRKTMGRRSESVKYEAKGEGNEFSKMTDEELNRRVEEFIQRINRQMRLQSSN