; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC03g0701 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC03g0701
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description60S ribosomal protein L18a-like protein
Genome locationMC03:13882876..13886306
RNA-Seq ExpressionMC03g0701
SyntenyMC03g0701
Gene Ontology termsGO:0005840 - ribosome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR044804 - AT1G29970-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147407.1 60S ribosomal protein L18a-like protein [Cucumis sativus]9.55e-9884.91Show/hide
Query:  MSGDGKNSAVLGDPQSQYHYGTFQGVANYYPSASQPQPQPQPHSVVGFPQPVAPPRVSGPHPYYHGHLGYQAVPVQGYAIIEGRPYQEARLPCCGIGMGW
        MSGDGK++ V GDP SQYHYGTFQGVANYY S  QPQPQPQP SVVGFPQPVA P VSG  P YHGHLGYQAVPVQGYAI+EGRP+QEARLPCCGIGMGW
Subjt:  MSGDGKNSAVLGDPQSQYHYGTFQGVANYYPSASQPQPQPQPHSVVGFPQPVAPPRVSGPHPYYHGHLGYQAVPVQGYAIIEGRPYQEARLPCCGIGMGW

Query:  FLFVIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACVIASVLALVAITFGVTKGAESW
        FLF+IGFFLGGIPWYVGAFIVLFVRVDYREKPGYVAC IASVLA++AITFG+T G E W
Subjt:  FLFVIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACVIASVLALVAITFGVTKGAESW

XP_008444018.1 PREDICTED: 60S ribosomal protein L18a-like protein [Cucumis melo]2.01e-9986.16Show/hide
Query:  MSGDGKNSAVLGDPQSQYHYGTFQGVANYYPSASQPQPQPQPHSVVGFPQPVAPPRVSGPHPYYHGHLGYQAVPVQGYAIIEGRPYQEARLPCCGIGMGW
        MSGDGK+S V GDP SQYHYGTFQGVANYY S  QPQPQPQP SVVGFPQPVAPP VSG  P YHGHLGYQAVPVQGYAI+EGRP+QEARLPCCGIGMGW
Subjt:  MSGDGKNSAVLGDPQSQYHYGTFQGVANYYPSASQPQPQPQPHSVVGFPQPVAPPRVSGPHPYYHGHLGYQAVPVQGYAIIEGRPYQEARLPCCGIGMGW

Query:  FLFVIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACVIASVLALVAITFGVTKGAESW
        FLF+IGFFLGGIPWYVGAFIVLFVRVDYREKPGYVAC IASVLA++AITFG+T G E W
Subjt:  FLFVIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACVIASVLALVAITFGVTKGAESW

XP_022140257.1 60S ribosomal protein L18a-like protein [Momordica charantia]3.36e-116100Show/hide
Query:  MSGDGKNSAVLGDPQSQYHYGTFQGVANYYPSASQPQPQPQPHSVVGFPQPVAPPRVSGPHPYYHGHLGYQAVPVQGYAIIEGRPYQEARLPCCGIGMGW
        MSGDGKNSAVLGDPQSQYHYGTFQGVANYYPSASQPQPQPQPHSVVGFPQPVAPPRVSGPHPYYHGHLGYQAVPVQGYAIIEGRPYQEARLPCCGIGMGW
Subjt:  MSGDGKNSAVLGDPQSQYHYGTFQGVANYYPSASQPQPQPQPHSVVGFPQPVAPPRVSGPHPYYHGHLGYQAVPVQGYAIIEGRPYQEARLPCCGIGMGW

Query:  FLFVIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACVIASVLALVAITFGVTKGAESW
        FLFVIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACVIASVLALVAITFGVTKGAESW
Subjt:  FLFVIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACVIASVLALVAITFGVTKGAESW

XP_022927552.1 60S ribosomal protein L18a-like protein [Cucurbita moschata]1.32e-9483.65Show/hide
Query:  MSGDGKNSAVLGDPQSQYHYGTFQGVANYYPSASQPQPQPQPHSVVGFPQPVAPPRVSGPHPYYHGHLGYQAVPVQGYAIIEGRPYQEARLPCCGIGMGW
        MSGDGK+SAV GDPQSQYHYGTFQGVANYY SA +PQPQP P SVVGFP  VAPPR    HP YHGHL YQAVPVQGYAIIEGRP+ EARLPCCGIGMGW
Subjt:  MSGDGKNSAVLGDPQSQYHYGTFQGVANYYPSASQPQPQPQPHSVVGFPQPVAPPRVSGPHPYYHGHLGYQAVPVQGYAIIEGRPYQEARLPCCGIGMGW

Query:  FLFVIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACVIASVLALVAITFGVTKGAESW
        FLF+IGFFLGGIPWYVGAF+VLFVRVDYREKPGY+AC IASVLA++AITFGV+KG E W
Subjt:  FLFVIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACVIASVLALVAITFGVTKGAESW

XP_023519744.1 60S ribosomal protein L18a-like protein [Cucurbita pepo subsp. pepo]5.39e-9483.65Show/hide
Query:  MSGDGKNSAVLGDPQSQYHYGTFQGVANYYPSASQPQPQPQPHSVVGFPQPVAPPRVSGPHPYYHGHLGYQAVPVQGYAIIEGRPYQEARLPCCGIGMGW
        MSGDGK+SAV GDPQSQYHYGTFQGVANYY SA QPQPQP P SVVGFP  VAPPR    HP YHGHL YQAVPVQGYAIIEG P+ EARLPCCGIGMGW
Subjt:  MSGDGKNSAVLGDPQSQYHYGTFQGVANYYPSASQPQPQPQPHSVVGFPQPVAPPRVSGPHPYYHGHLGYQAVPVQGYAIIEGRPYQEARLPCCGIGMGW

Query:  FLFVIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACVIASVLALVAITFGVTKGAESW
        FLF+IGFFLGGIPWYVGAF+VLFVRVDYREKPGY+AC IASVLA++AITFGV+KG E W
Subjt:  FLFVIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACVIASVLALVAITFGVTKGAESW

TrEMBL top hitse value%identityAlignment
A0A0A0M051 Uncharacterized protein4.62e-9884.91Show/hide
Query:  MSGDGKNSAVLGDPQSQYHYGTFQGVANYYPSASQPQPQPQPHSVVGFPQPVAPPRVSGPHPYYHGHLGYQAVPVQGYAIIEGRPYQEARLPCCGIGMGW
        MSGDGK++ V GDP SQYHYGTFQGVANYY S  QPQPQPQP SVVGFPQPVA P VSG  P YHGHLGYQAVPVQGYAI+EGRP+QEARLPCCGIGMGW
Subjt:  MSGDGKNSAVLGDPQSQYHYGTFQGVANYYPSASQPQPQPQPHSVVGFPQPVAPPRVSGPHPYYHGHLGYQAVPVQGYAIIEGRPYQEARLPCCGIGMGW

Query:  FLFVIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACVIASVLALVAITFGVTKGAESW
        FLF+IGFFLGGIPWYVGAFIVLFVRVDYREKPGYVAC IASVLA++AITFG+T G E W
Subjt:  FLFVIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACVIASVLALVAITFGVTKGAESW

A0A1S3B9D9 60S ribosomal protein L18a-like protein9.72e-10086.16Show/hide
Query:  MSGDGKNSAVLGDPQSQYHYGTFQGVANYYPSASQPQPQPQPHSVVGFPQPVAPPRVSGPHPYYHGHLGYQAVPVQGYAIIEGRPYQEARLPCCGIGMGW
        MSGDGK+S V GDP SQYHYGTFQGVANYY S  QPQPQPQP SVVGFPQPVAPP VSG  P YHGHLGYQAVPVQGYAI+EGRP+QEARLPCCGIGMGW
Subjt:  MSGDGKNSAVLGDPQSQYHYGTFQGVANYYPSASQPQPQPQPHSVVGFPQPVAPPRVSGPHPYYHGHLGYQAVPVQGYAIIEGRPYQEARLPCCGIGMGW

Query:  FLFVIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACVIASVLALVAITFGVTKGAESW
        FLF+IGFFLGGIPWYVGAFIVLFVRVDYREKPGYVAC IASVLA++AITFG+T G E W
Subjt:  FLFVIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACVIASVLALVAITFGVTKGAESW

A0A6J1CGC1 60S ribosomal protein L18a-like protein1.63e-116100Show/hide
Query:  MSGDGKNSAVLGDPQSQYHYGTFQGVANYYPSASQPQPQPQPHSVVGFPQPVAPPRVSGPHPYYHGHLGYQAVPVQGYAIIEGRPYQEARLPCCGIGMGW
        MSGDGKNSAVLGDPQSQYHYGTFQGVANYYPSASQPQPQPQPHSVVGFPQPVAPPRVSGPHPYYHGHLGYQAVPVQGYAIIEGRPYQEARLPCCGIGMGW
Subjt:  MSGDGKNSAVLGDPQSQYHYGTFQGVANYYPSASQPQPQPQPHSVVGFPQPVAPPRVSGPHPYYHGHLGYQAVPVQGYAIIEGRPYQEARLPCCGIGMGW

Query:  FLFVIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACVIASVLALVAITFGVTKGAESW
        FLFVIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACVIASVLALVAITFGVTKGAESW
Subjt:  FLFVIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACVIASVLALVAITFGVTKGAESW

A0A6J1EHH7 60S ribosomal protein L18a-like protein6.41e-9583.65Show/hide
Query:  MSGDGKNSAVLGDPQSQYHYGTFQGVANYYPSASQPQPQPQPHSVVGFPQPVAPPRVSGPHPYYHGHLGYQAVPVQGYAIIEGRPYQEARLPCCGIGMGW
        MSGDGK+SAV GDPQSQYHYGTFQGVANYY SA +PQPQP P SVVGFP  VAPPR    HP YHGHL YQAVPVQGYAIIEGRP+ EARLPCCGIGMGW
Subjt:  MSGDGKNSAVLGDPQSQYHYGTFQGVANYYPSASQPQPQPQPHSVVGFPQPVAPPRVSGPHPYYHGHLGYQAVPVQGYAIIEGRPYQEARLPCCGIGMGW

Query:  FLFVIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACVIASVLALVAITFGVTKGAESW
        FLF+IGFFLGGIPWYVGAF+VLFVRVDYREKPGY+AC IASVLA++AITFGV+KG E W
Subjt:  FLFVIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACVIASVLALVAITFGVTKGAESW

A0A6J1KIR0 60S ribosomal protein L18a-like protein5.27e-9483.65Show/hide
Query:  MSGDGKNSAVLGDPQSQYHYGTFQGVANYYPSASQPQPQPQPHSVVGFPQPVAPPRVSGPHPYYHGHLGYQAVPVQGYAIIEGRPYQEARLPCCGIGMGW
        MS DGK+SAV GDPQSQYHYGTFQGVANYY SA QPQPQP P SVVGFP  VAPPR    HP YHGHL YQAVPVQGYAIIEGRP+ EARLPCCGIGMGW
Subjt:  MSGDGKNSAVLGDPQSQYHYGTFQGVANYYPSASQPQPQPQPHSVVGFPQPVAPPRVSGPHPYYHGHLGYQAVPVQGYAIIEGRPYQEARLPCCGIGMGW

Query:  FLFVIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACVIASVLALVAITFGVTKGAESW
        FLF+IGFFLGGIPWYVGAF+VLFVRVDYREKPGY+AC IASVLA++AITFGV+KG E W
Subjt:  FLFVIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACVIASVLALVAITFGVTKGAESW

SwissProt top hitse value%identityAlignment
Q8L9S1 60S ribosomal protein L18a-like protein1.1e-3050.98Show/hide
Query:  QSQYHYGTFQGVANYYPSASQPQPQPQPHSVVGFPQPVAPPRVSGPHPYYH--GHLG----YQAVP--VQGYAIIEGRPYQEARLPCCGIGMGWFLFVIG
        Q QY+YGTFQGVAN+      P P P P     F QP  P      H Y +  GH G     Q  P  V  Y ++E RP  E  LPCCG+GMGWFLF++G
Subjt:  QSQYHYGTFQGVANYYPSASQPQPQPQPHSVVGFPQPVAPPRVSGPHPYYH--GHLG----YQAVP--VQGYAIIEGRPYQEARLPCCGIGMGWFLFVIG

Query:  FFLGGIPWYVGAFIVLFVRVDYREKPGYVACVIASVLALVAITFGVTKGAESW
        F  GGIPWY+GAFIVL   VD+REK GYVAC IASV+ L+A+  G+T     W
Subjt:  FFLGGIPWYVGAFIVLFVRVDYREKPGYVACVIASVLALVAITFGVTKGAESW

Arabidopsis top hitse value%identityAlignment
AT1G17080.1 Ribosomal protein L18ae family6.4e-4255.06Show/hide
Query:  DGKNSAVLGDPQSQYH-YGTFQGVANYYPSASQPQPQPQPHSVVGFPQPVAPPRVSGPHPYYHGHLGYQAVPVQGYAIIEGRPYQEARLPCCGIGMGWFL
        + K+     +  +Q+H YGTFQGV+NY      P PQ     V GFPQP APP V      Y+ H GYQ VPV G  + EGRP ++ RLPCCGIG+GWFL
Subjt:  DGKNSAVLGDPQSQYH-YGTFQGVANYYPSASQPQPQPQPHSVVGFPQPVAPPRVSGPHPYYHGHLGYQAVPVQGYAIIEGRPYQEARLPCCGIGMGWFL

Query:  FVIGFFLGGIPWYVGAFIVLF-VRVDYREKPGYVACVIASVLALVAITFGVTKGAESW
        F++GFFLG IPWYVG FI++F  R+DYREKPGY+AC IA++LA +A+  GV+KGA+ W
Subjt:  FVIGFFLGGIPWYVGAFIVLF-VRVDYREKPGYVACVIASVLALVAITFGVTKGAESW

AT1G29970.1 60S ribosomal protein L18A-17.9e-3250.98Show/hide
Query:  QSQYHYGTFQGVANYYPSASQPQPQPQPHSVVGFPQPVAPPRVSGPHPYYH--GHLG----YQAVP--VQGYAIIEGRPYQEARLPCCGIGMGWFLFVIG
        Q QY+YGTFQGVAN+      P P P P     F QP  P      H Y +  GH G     Q  P  V  Y ++E RP  E  LPCCG+GMGWFLF++G
Subjt:  QSQYHYGTFQGVANYYPSASQPQPQPQPHSVVGFPQPVAPPRVSGPHPYYH--GHLG----YQAVP--VQGYAIIEGRPYQEARLPCCGIGMGWFLFVIG

Query:  FFLGGIPWYVGAFIVLFVRVDYREKPGYVACVIASVLALVAITFGVTKGAESW
        F  GGIPWY+GAFIVL   VD+REK GYVAC IASV+ L+A+  G+T     W
Subjt:  FFLGGIPWYVGAFIVLFVRVDYREKPGYVACVIASVLALVAITFGVTKGAESW

AT1G29970.2 60S ribosomal protein L18A-11.5e-2752.99Show/hide
Query:  QSQYHYGTFQGVANYYPSASQPQPQPQPHSVVGFPQPVAPPRVSGPHPYYH--GHLG----YQAVP--VQGYAIIEGRPYQEARLPCCGIGMGWFLFVIG
        Q QY+YGTFQGVAN+      P P P P     F QP  P      H Y +  GH G     Q  P  V  Y ++E RP  E  LPCCG+GMGWFLF++G
Subjt:  QSQYHYGTFQGVANYYPSASQPQPQPQPHSVVGFPQPVAPPRVSGPHPYYH--GHLG----YQAVP--VQGYAIIEGRPYQEARLPCCGIGMGWFLFVIG

Query:  FFLGGIPWYVGAFIVLFVRVDYREKPGYVACVIA
        F  GGIPWY+GAFIVL   VD+REK GYVAC IA
Subjt:  FFLGGIPWYVGAFIVLFVRVDYREKPGYVACVIA

AT1G29970.3 60S ribosomal protein L18A-11.1e-2540Show/hide
Query:  QSQYHYGTFQGVANYYPSASQPQPQPQPHSVVGFPQPVAPPRVSGPHPYYH--GHLG----YQAVP--VQGYAIIEGRPYQEARLPCCGIGMGWFL----
        Q QY+YGTFQGVAN+      P P P P     F QP  P      H Y +  GH G     Q  P  V  Y ++E RP  E  LPCCG+GMGWFL    
Subjt:  QSQYHYGTFQGVANYYPSASQPQPQPQPHSVVGFPQPVAPPRVSGPHPYYH--GHLG----YQAVP--VQGYAIIEGRPYQEARLPCCGIGMGWFL----

Query:  --------------------------------------FVIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACVIASVLALVAITFGVTKGAESW
                                              F++GF  GGIPWY+GAFIVL   VD+REK GYVAC IASV+ L+A+  G+T     W
Subjt:  --------------------------------------FVIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACVIASVLALVAITFGVTKGAESW

AT1G53560.1 Ribosomal protein L18ae family5.8e-3554.61Show/hide
Query:  YGTFQGVANYYPSASQPQPQPQPHSVVGFPQPVAPPRVSGPHPYYHGHLGYQA-VPVQGYAIIEGRPYQEARLPCCGIGMGWFLFVIGFFLGGIPWYVGA
        YGTFQGV   YP  S P P P  H V+G PQP  PP    PH     H   Q    V GY + +GRP ++ RLPCCG+G+GWFLF+IGF LG IPWYVG 
Subjt:  YGTFQGVANYYPSASQPQPQPQPHSVVGFPQPVAPPRVSGPHPYYHGHLGYQA-VPVQGYAIIEGRPYQEARLPCCGIGMGWFLFVIGFFLGGIPWYVGA

Query:  FIVLFVRVDYREKPGYVACVIASVLALVAITFGVTKGAESW
        FI++  R+D REKPGYVAC IA+V+A + I FGV  G   W
Subjt:  FIVLFVRVDYREKPGYVACVIASVLALVAITFGVTKGAESW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGGCGACGGGAAAAACAGCGCGGTATTGGGCGATCCACAGAGTCAATACCATTACGGTACGTTTCAGGGTGTCGCAAACTATTATCCTTCTGCCTCACAGCCGCA
GCCGCAGCCGCAACCCCATTCTGTCGTTGGTTTCCCTCAACCGGTTGCGCCGCCCCGAGTTTCTGGCCCTCACCCATATTACCATGGACATCTGGGTTACCAAGCCGTCC
CGGTTCAAGGTTATGCTATTATTGAGGGAAGACCTTATCAAGAAGCCCGTCTTCCTTGCTGTGGCATTGGCATGGGCTGGTTCTTGTTTGTAATTGGGTTCTTTCTTGGT
GGCATTCCTTGGTATGTTGGAGCTTTTATCGTACTCTTTGTACGAGTGGATTACCGAGAAAAGCCTGGATATGTAGCATGCGTAATCGCTTCAGTCCTTGCCCTCGTTGC
TATAACTTTTGGTGTCACCAAGGGAGCTGAGTCGTGGTAA
mRNA sequenceShow/hide mRNA sequence
CTCCGATTCTCTCTCTCCCGCGCCCGGTTTGAGCAAATACTGCCAGCTGTACAACTACAATTCACCGAAACCGGAAACCGCCGTCTACTTTATATAGCCGGAAACAACCA
CTCTCTTTCCGCCATTGCTCCCTCCCTCGCTCCAAAATTTTCCGGCGAAATCGCAGAAGAAGGTGAAAGAAGCGACGACGGGACCCTCGCCGTCGCCGTGATATTCAACA
GACCGTATTTGATTCTGGTTTTCTCTTCTTCTGCAAAAGAATTATGAGTGGCGACGGGAAAAACAGCGCGGTATTGGGCGATCCACAGAGTCAATACCATTACGGTACGT
TTCAGGGTGTCGCAAACTATTATCCTTCTGCCTCACAGCCGCAGCCGCAGCCGCAACCCCATTCTGTCGTTGGTTTCCCTCAACCGGTTGCGCCGCCCCGAGTTTCTGGC
CCTCACCCATATTACCATGGACATCTGGGTTACCAAGCCGTCCCGGTTCAAGGTTATGCTATTATTGAGGGAAGACCTTATCAAGAAGCCCGTCTTCCTTGCTGTGGCAT
TGGCATGGGCTGGTTCTTGTTTGTAATTGGGTTCTTTCTTGGTGGCATTCCTTGGTATGTTGGAGCTTTTATCGTACTCTTTGTACGAGTGGATTACCGAGAAAAGCCTG
GATATGTAGCATGCGTAATCGCTTCAGTCCTTGCCCTCGTTGCTATAACTTTTGGTGTCACCAAGGGAGCTGAGTCGTGGTAAAGGAGGCATCAGCGGAGCAGACTGGTC
TGACTGTTCCAGCCTTGTCGCCCCTTGCTTCGACGAAAACAACTTGGTGGTATCGTATTGTGTAATTAGCTTTGCAATTGTATTCATTCAATCTCTATCTATAAACTTCT
TGGTTTCCTTTACCATATACTGCAGTCTTCCTGACTTGCCAAATATGATATGCATAATAGATTGAAGTAGTAGATATTGACAACTTTATTGGAAGGTATTCATTCAAATG
TT
Protein sequenceShow/hide protein sequence
MSGDGKNSAVLGDPQSQYHYGTFQGVANYYPSASQPQPQPQPHSVVGFPQPVAPPRVSGPHPYYHGHLGYQAVPVQGYAIIEGRPYQEARLPCCGIGMGWFLFVIGFFLG
GIPWYVGAFIVLFVRVDYREKPGYVACVIASVLALVAITFGVTKGAESW