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MC03g0795 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC03g0795
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionprotein LOL2
Genome locationMC03:14654806..14656687
RNA-Seq ExpressionMC03g0795
SyntenyMC03g0795
Gene Ontology termsGO:0009617 - response to bacterium (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR005735 - Zinc finger, LSD1-type
IPR040319 - LSD1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146601.1 protein LOL2 isoform X2 [Cucumis sativus]9.46e-6088.78Show/hide
Query:  AADMAQMVCGSCRRLLKYLKGARYVRCSCCSTVNYVLEAQEVGQVKCGSCALLLMYPYGASSVRCSSCTNVTEIGVHNRRPPWSVQQGQATPPTNVVQ
        ++DMAQMVCG+CRRLLKYLKGARYV+CSCCSTVN+VLEA EVGQVKCGSCA+LLMYPYGASSVRCSSCT+VTEIGVHNRRPPWSV QGQA PPTN VQ
Subjt:  AADMAQMVCGSCRRLLKYLKGARYVRCSCCSTVNYVLEAQEVGQVKCGSCALLLMYPYGASSVRCSSCTNVTEIGVHNRRPPWSVQQGQATPPTNVVQ

XP_011653178.1 protein LOL2 isoform X1 [Cucumis sativus]3.41e-6089.8Show/hide
Query:  AADMAQMVCGSCRRLLKYLKGARYVRCSCCSTVNYVLEAQEVGQVKCGSCALLLMYPYGASSVRCSSCTNVTEIGVHNRRPPWSVQQGQATPPTNVVQ
        +ADMAQMVCG+CRRLLKYLKGARYV+CSCCSTVN+VLEA EVGQVKCGSCA+LLMYPYGASSVRCSSCT+VTEIGVHNRRPPWSV QGQA PPTN VQ
Subjt:  AADMAQMVCGSCRRLLKYLKGARYVRCSCCSTVNYVLEAQEVGQVKCGSCALLLMYPYGASSVRCSSCTNVTEIGVHNRRPPWSVQQGQATPPTNVVQ

XP_022140183.1 protein LOL2 [Momordica charantia]1.07e-6597.96Show/hide
Query:  AADMAQMVCGSCRRLLKYLKGARYVRCSCCSTVNYVLEAQEVGQVKCGSCALLLMYPYGASSVRCSSCTNVTEIGVHNRRPPWSVQQGQATPPTNVVQ
        ++DMAQMVCGSCRRLLKYLKGARYVRCSCCSTVNYVLEAQEVGQVKCGSCALLLMYPYGASSVRCSSCTNVTEIGVHNRRPPWSVQQGQATPPTNVVQ
Subjt:  AADMAQMVCGSCRRLLKYLKGARYVRCSCCSTVNYVLEAQEVGQVKCGSCALLLMYPYGASSVRCSSCTNVTEIGVHNRRPPWSVQQGQATPPTNVVQ

XP_022927005.1 protein LOL2 [Cucurbita moschata]2.32e-6090.82Show/hide
Query:  AADMAQMVCGSCRRLLKYLKGARYVRCSCCSTVNYVLEAQEVGQVKCGSCALLLMYPYGASSVRCSSCTNVTEIGVHNRRPPWSVQQGQATPPTNVVQ
        ++DMAQMVCG+CRRLLKYLKGARYV+CSCCSTVNYVLEA EVGQVKCGSCA+LLMYPYGASSVRCSSCT VTEIGVHNRRPPWSVQQGQA PPTN VQ
Subjt:  AADMAQMVCGSCRRLLKYLKGARYVRCSCCSTVNYVLEAQEVGQVKCGSCALLLMYPYGASSVRCSSCTNVTEIGVHNRRPPWSVQQGQATPPTNVVQ

XP_023001758.1 protein LOL2 [Cucurbita maxima]2.32e-6090.82Show/hide
Query:  AADMAQMVCGSCRRLLKYLKGARYVRCSCCSTVNYVLEAQEVGQVKCGSCALLLMYPYGASSVRCSSCTNVTEIGVHNRRPPWSVQQGQATPPTNVVQ
        ++DMAQMVCG+CRRLLKYLKGARYV+CSCCSTVNYVLEA EVGQVKCGSCA+LLMYPYGASSVRCSSCT VTEIGVHNRRPPWSVQQGQA PPTN VQ
Subjt:  AADMAQMVCGSCRRLLKYLKGARYVRCSCCSTVNYVLEAQEVGQVKCGSCALLLMYPYGASSVRCSSCTNVTEIGVHNRRPPWSVQQGQATPPTNVVQ

TrEMBL top hitse value%identityAlignment
A0A0A0LXE3 Uncharacterized protein4.58e-6088.78Show/hide
Query:  AADMAQMVCGSCRRLLKYLKGARYVRCSCCSTVNYVLEAQEVGQVKCGSCALLLMYPYGASSVRCSSCTNVTEIGVHNRRPPWSVQQGQATPPTNVVQ
        ++DMAQMVCG+CRRLLKYLKGARYV+CSCCSTVN+VLEA EVGQVKCGSCA+LLMYPYGASSVRCSSCT+VTEIGVHNRRPPWSV QGQA PPTN VQ
Subjt:  AADMAQMVCGSCRRLLKYLKGARYVRCSCCSTVNYVLEAQEVGQVKCGSCALLLMYPYGASSVRCSSCTNVTEIGVHNRRPPWSVQQGQATPPTNVVQ

A0A5D3DST5 Protein LOL2 isoform X31.93e-5990.72Show/hide
Query:  ADMAQMVCGSCRRLLKYLKGARYVRCSCCSTVNYVLEAQEVGQVKCGSCALLLMYPYGASSVRCSSCTNVTEIGVHNRRPPWSVQQGQATPPTNVVQ
        ADMAQMVCG+CRRLLKYLKGARYV+CS CSTVN+VLEA EVGQVKCGSCA+LLMYPYGASSVRCSSCT+VTEIGVHNRRPPWSVQQGQA PPTN VQ
Subjt:  ADMAQMVCGSCRRLLKYLKGARYVRCSCCSTVNYVLEAQEVGQVKCGSCALLLMYPYGASSVRCSSCTNVTEIGVHNRRPPWSVQQGQATPPTNVVQ

A0A6J1CHF4 protein LOL25.18e-6697.96Show/hide
Query:  AADMAQMVCGSCRRLLKYLKGARYVRCSCCSTVNYVLEAQEVGQVKCGSCALLLMYPYGASSVRCSSCTNVTEIGVHNRRPPWSVQQGQATPPTNVVQ
        ++DMAQMVCGSCRRLLKYLKGARYVRCSCCSTVNYVLEAQEVGQVKCGSCALLLMYPYGASSVRCSSCTNVTEIGVHNRRPPWSVQQGQATPPTNVVQ
Subjt:  AADMAQMVCGSCRRLLKYLKGARYVRCSCCSTVNYVLEAQEVGQVKCGSCALLLMYPYGASSVRCSSCTNVTEIGVHNRRPPWSVQQGQATPPTNVVQ

A0A6J1EMN3 protein LOL21.13e-6090.82Show/hide
Query:  AADMAQMVCGSCRRLLKYLKGARYVRCSCCSTVNYVLEAQEVGQVKCGSCALLLMYPYGASSVRCSSCTNVTEIGVHNRRPPWSVQQGQATPPTNVVQ
        ++DMAQMVCG+CRRLLKYLKGARYV+CSCCSTVNYVLEA EVGQVKCGSCA+LLMYPYGASSVRCSSCT VTEIGVHNRRPPWSVQQGQA PPTN VQ
Subjt:  AADMAQMVCGSCRRLLKYLKGARYVRCSCCSTVNYVLEAQEVGQVKCGSCALLLMYPYGASSVRCSSCTNVTEIGVHNRRPPWSVQQGQATPPTNVVQ

A0A6J1KRG9 protein LOL21.13e-6090.82Show/hide
Query:  AADMAQMVCGSCRRLLKYLKGARYVRCSCCSTVNYVLEAQEVGQVKCGSCALLLMYPYGASSVRCSSCTNVTEIGVHNRRPPWSVQQGQATPPTNVVQ
        ++DMAQMVCG+CRRLLKYLKGARYV+CSCCSTVNYVLEA EVGQVKCGSCA+LLMYPYGASSVRCSSCT VTEIGVHNRRPPWSVQQGQA PPTN VQ
Subjt:  AADMAQMVCGSCRRLLKYLKGARYVRCSCCSTVNYVLEAQEVGQVKCGSCALLLMYPYGASSVRCSSCTNVTEIGVHNRRPPWSVQQGQATPPTNVVQ

SwissProt top hitse value%identityAlignment
O65426 Protein LOL29.0e-3168.6Show/hide
Query:  DMAQMVCGSCRRLLKYLKGARYVRCSCCSTVNYVLEAQEVGQVKCGSCALLLMYPYGASSVRCSSCTNVTEIGVHNRRPPWSVQQG
        + AQMVCGSCRRLL YL+G+++V+CS C TVN VLEA +VGQV C +C LLLMYPYGA +VRCSSC +VT+I  +N+RPPWS QQG
Subjt:  DMAQMVCGSCRRLLKYLKGARYVRCSCCSTVNYVLEAQEVGQVKCGSCALLLMYPYGASSVRCSSCTNVTEIGVHNRRPPWSVQQG

P94077 Protein LSD11.8e-1844.66Show/hide
Query:  DMAQMVCGSCRRLLKYLKGARYVRCSCCSTVNYV---------LEAQEVGQVKCGSCALLLMYPYGASSVRCSSCTNVTEIGVHNRRPPWSVQQ--GQAT
        DMA ++CG CR +L Y +GA  VRCSCC T N V           + +V Q+ CG C   LMYPYGASSV+C+ C  VT + + N R P    +  G A 
Subjt:  DMAQMVCGSCRRLLKYLKGARYVRCSCCSTVNYV---------LEAQEVGQVKCGSCALLLMYPYGASSVRCSSCTNVTEIGVHNRRPPWSVQQ--GQAT

Query:  PPT
        PP+
Subjt:  PPT

Q0J7V9 Protein LSD11.6e-1956.16Show/hide
Query:  DMAQMVCGSCRRLLKYLKGARYVRCSCCSTVNYVLEAQEVGQVKCGSCALLLMYPYGASSVRCSSCTNVTEIG
        +MAQ+VCG C  LL Y++GA  V+CSCC TVN  +EA +V  V CG+C +LLMY YGA SV+C+ C  VT +G
Subjt:  DMAQMVCGSCRRLLKYLKGARYVRCSCCSTVNYVLEAQEVGQVKCGSCALLLMYPYGASSVRCSSCTNVTEIG

Q704V3 Protein LOL53.3e-2556.25Show/hide
Query:  DMAQMVCGSCRRLLKYLKGARYVRCSCCSTVNYVLEAQEVGQVKCGSCALLLMYPYGASSVRCSSCTNVTEIGVHNRRPPWSVQQGQATPPTNVVQ
        ++ QMVCGSCR LL Y +GA YV C+CC T+NYVLEA EVG+V CG CA LLMYP+GA +V+CS C  VTEIG  N R   S++Q   T  + + +
Subjt:  DMAQMVCGSCRRLLKYLKGARYVRCSCCSTVNYVLEAQEVGQVKCGSCALLLMYPYGASSVRCSSCTNVTEIGVHNRRPPWSVQQGQATPPTNVVQ

Q93ZB1 Protein LOL19.3e-2057.53Show/hide
Query:  DMAQMVCGSCRRLLKYLKGARYVRCSCCSTVNYVLEAQEVGQVKCGSCALLLMYPYGASSVRCSSCTNVTEIG
        +MAQ+VCG C  LL Y++GA  V+CSCC TVN  LEA +V  V CG+C +LLMY YGA SV+C+ C  VT +G
Subjt:  DMAQMVCGSCRRLLKYLKGARYVRCSCCSTVNYVLEAQEVGQVKCGSCALLLMYPYGASSVRCSSCTNVTEIG

Arabidopsis top hitse value%identityAlignment
AT1G32540.1 lsd one like 16.6e-2157.53Show/hide
Query:  DMAQMVCGSCRRLLKYLKGARYVRCSCCSTVNYVLEAQEVGQVKCGSCALLLMYPYGASSVRCSSCTNVTEIG
        +MAQ+VCG C  LL Y++GA  V+CSCC TVN  LEA +V  V CG+C +LLMY YGA SV+C+ C  VT +G
Subjt:  DMAQMVCGSCRRLLKYLKGARYVRCSCCSTVNYVLEAQEVGQVKCGSCALLLMYPYGASSVRCSSCTNVTEIG

AT1G32540.2 lsd one like 16.6e-2157.53Show/hide
Query:  DMAQMVCGSCRRLLKYLKGARYVRCSCCSTVNYVLEAQEVGQVKCGSCALLLMYPYGASSVRCSSCTNVTEIG
        +MAQ+VCG C  LL Y++GA  V+CSCC TVN  LEA +V  V CG+C +LLMY YGA SV+C+ C  VT +G
Subjt:  DMAQMVCGSCRRLLKYLKGARYVRCSCCSTVNYVLEAQEVGQVKCGSCALLLMYPYGASSVRCSSCTNVTEIG

AT1G32540.3 lsd one like 16.6e-2157.53Show/hide
Query:  DMAQMVCGSCRRLLKYLKGARYVRCSCCSTVNYVLEAQEVGQVKCGSCALLLMYPYGASSVRCSSCTNVTEIG
        +MAQ+VCG C  LL Y++GA  V+CSCC TVN  LEA +V  V CG+C +LLMY YGA SV+C+ C  VT +G
Subjt:  DMAQMVCGSCRRLLKYLKGARYVRCSCCSTVNYVLEAQEVGQVKCGSCALLLMYPYGASSVRCSSCTNVTEIG

AT4G20380.2 LSD1 zinc finger family protein1.2e-1944.66Show/hide
Query:  DMAQMVCGSCRRLLKYLKGARYVRCSCCSTVNYV---------LEAQEVGQVKCGSCALLLMYPYGASSVRCSSCTNVTEIGVHNRRPPWSVQQ--GQAT
        DMA ++CG CR +L Y +GA  VRCSCC T N V           + +V Q+ CG C   LMYPYGASSV+C+ C  VT + + N R P    +  G A 
Subjt:  DMAQMVCGSCRRLLKYLKGARYVRCSCCSTVNYV---------LEAQEVGQVKCGSCALLLMYPYGASSVRCSSCTNVTEIGVHNRRPPWSVQQ--GQAT

Query:  PPT
        PP+
Subjt:  PPT

AT4G21610.1 lsd one like 26.4e-3268.6Show/hide
Query:  DMAQMVCGSCRRLLKYLKGARYVRCSCCSTVNYVLEAQEVGQVKCGSCALLLMYPYGASSVRCSSCTNVTEIGVHNRRPPWSVQQG
        + AQMVCGSCRRLL YL+G+++V+CS C TVN VLEA +VGQV C +C LLLMYPYGA +VRCSSC +VT+I  +N+RPPWS QQG
Subjt:  DMAQMVCGSCRRLLKYLKGARYVRCSCCSTVNYVLEAQEVGQVKCGSCALLLMYPYGASSVRCSSCTNVTEIGVHNRRPPWSVQQG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCAGCTGATATGGCACAAATGGTCTGTGGTTCCTGCCGTCGCCTGCTTAAGTATTTAAAGGGAGCCAGATATGTTCGGTGCTCTTGCTGTTCAACAGTCAACTATGTGCT
AGAAGCACAGGAGGTTGGACAAGTTAAATGTGGTTCCTGTGCATTGTTGCTGATGTACCCATATGGAGCATCATCAGTTAGGTGTTCGTCGTGTACCAATGTAACAGAAA
TTGGGGTGCATAACAGACGCCCACCGTGGTCTGTCCAGCAGGGACAAGCAACCCCTCCTACCAACGTTGTCCAGTAG
mRNA sequenceShow/hide mRNA sequence
GCAGCTGATATGGCACAAATGGTCTGTGGTTCCTGCCGTCGCCTGCTTAAGTATTTAAAGGGAGCCAGATATGTTCGGTGCTCTTGCTGTTCAACAGTCAACTATGTGCT
AGAAGCACAGGAGGTTGGACAAGTTAAATGTGGTTCCTGTGCATTGTTGCTGATGTACCCATATGGAGCATCATCAGTTAGGTGTTCGTCGTGTACCAATGTAACAGAAA
TTGGGGTGCATAACAGACGCCCACCGTGGTCTGTCCAGCAGGGACAAGCAACCCCTCCTACCAACGTTGTCCAGTAGAGTCTGATTATCTATGACTTATGTGATACTTCT
GCTAGGAAAAGATCTGGTATCTTCTGAATTGGTCTTTTCCTTTGCAGCCTTAATCATGCAGAGAAGGAAAAACAACATACTCATTACCGGCAGTTTTTATTTCTCTATTA
GTTTTTTGAATTTATGTAAAGAAACTTAGGAACTGCTCTTCCCAACTTCTAACATGTTATCTACCCCAAGGGTGACTTGTCTTTGCCTTGTGACTTTGAATTCCTACTTA
TGTTGATTTTTTGTTCTGCTGTTTGGAGCCTTATTAGGTGCTGCCAATATATGAGGTGTTTTTCAATGTAAATGAATTTTTTTATTGAATATATTGATTAAAACAGCTAT
CTATGGACCAAATTTGGTTTCAATTCTAGCCTCTTTTTGGCTGCTCGGGTTTAATAAACGGAATCTTGGGGACAAGCATAC
Protein sequenceShow/hide protein sequence
AADMAQMVCGSCRRLLKYLKGARYVRCSCCSTVNYVLEAQEVGQVKCGSCALLLMYPYGASSVRCSSCTNVTEIGVHNRRPPWSVQQGQATPPTNVVQ