; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC03g1010 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC03g1010
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionMediator of RNA polymerase II transcription subunit 13, putative
Genome locationMC03:16617044..16617451
RNA-Seq ExpressionMC03g1010
SyntenyMC03g1010
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6584197.1 hypothetical protein SDJN03_20129, partial [Cucurbita argyrosperma subsp. sororia]1.82e-6077.21Show/hide
Query:  MKKKPEVEDDHRHLEILKAVAQAWHSHTGSSKPANEFDAHRRNCRGTPSRFKLEAIRTRSSAGDRSGGPRWDFSQSLWDSYEIVTVSKKLEAGLVLDGDV
        MK KP VED+  HLEILKAVAQAW SHTG+SKPA+EFDAHRRNCR  PSRFKLEAIR+RSS G   G  RWDF QSLWDSYEIV VSKKLE GLVLDGD 
Subjt:  MKKKPEVEDDHRHLEILKAVAQAWHSHTGSSKPANEFDAHRRNCRGTPSRFKLEAIRTRSSAGDRSGGPRWDFSQSLWDSYEIVTVSKKLEAGLVLDGDV

Query:  FHEYDGGGRGRVQRKHTESNNSLRNLFNRVSSRRFN
        F E DGGGR   QRK  ES NSLRNLFNR S RRFN
Subjt:  FHEYDGGGRGRVQRKHTESNNSLRNLFNRVSSRRFN

XP_011651756.1 uncharacterized protein LOC105434938 [Cucumis sativus]1.56e-6075.71Show/hide
Query:  MKKKPEVE---DDHRHLEILKAVAQAWHSHTGSSKPANEFDAHRRNCRGTPSRFKLEAIRTRSSA-GDRSGGPRWDFSQSLWDSYEIVTVSKKLEAGLVL
        MKKKP++    DD RHLEILKAVAQAWHSHTG+SKPA+EFDAHRRN R  PSRFK+EAIR+R+S   DR    RWDF+QSLWDSYEIVTVSKKLEAGLVL
Subjt:  MKKKPEVE---DDHRHLEILKAVAQAWHSHTGSSKPANEFDAHRRNCRGTPSRFKLEAIRTRSSA-GDRSGGPRWDFSQSLWDSYEIVTVSKKLEAGLVL

Query:  DGDVFHEYDGGGRGRVQRKHTESNNSLRNLFNRVSSRRFN
        DGD F E + GG GR QRK  ES NSLRNLFNR SSRRFN
Subjt:  DGDVFHEYDGGGRGRVQRKHTESNNSLRNLFNRVSSRRFN

XP_022137185.1 uncharacterized protein LOC111008716 [Momordica charantia]2.23e-94100Show/hide
Query:  MKKKPEVEDDHRHLEILKAVAQAWHSHTGSSKPANEFDAHRRNCRGTPSRFKLEAIRTRSSAGDRSGGPRWDFSQSLWDSYEIVTVSKKLEAGLVLDGDV
        MKKKPEVEDDHRHLEILKAVAQAWHSHTGSSKPANEFDAHRRNCRGTPSRFKLEAIRTRSSAGDRSGGPRWDFSQSLWDSYEIVTVSKKLEAGLVLDGDV
Subjt:  MKKKPEVEDDHRHLEILKAVAQAWHSHTGSSKPANEFDAHRRNCRGTPSRFKLEAIRTRSSAGDRSGGPRWDFSQSLWDSYEIVTVSKKLEAGLVLDGDV

Query:  FHEYDGGGRGRVQRKHTESNNSLRNLFNRVSSRRFN
        FHEYDGGGRGRVQRKHTESNNSLRNLFNRVSSRRFN
Subjt:  FHEYDGGGRGRVQRKHTESNNSLRNLFNRVSSRRFN

XP_022923731.1 uncharacterized protein LOC111431350 [Cucurbita moschata]3.84e-6077.21Show/hide
Query:  MKKKPEVEDDHRHLEILKAVAQAWHSHTGSSKPANEFDAHRRNCRGTPSRFKLEAIRTRSSAGDRSGGPRWDFSQSLWDSYEIVTVSKKLEAGLVLDGDV
        MK KP VED+  HLEILKAVAQAW SHTG+SKPA+EFDAHRRNCR  PSRFKLEAIR+RSS G   G  RWDF QSLWDSYEIV VSKKLE GLVLDGD 
Subjt:  MKKKPEVEDDHRHLEILKAVAQAWHSHTGSSKPANEFDAHRRNCRGTPSRFKLEAIRTRSSAGDRSGGPRWDFSQSLWDSYEIVTVSKKLEAGLVLDGDV

Query:  FHEYDGGGRGRVQRKHTESNNSLRNLFNRVSSRRFN
        F E DGGGR   QRK  ES NSLRNLFNR S RRFN
Subjt:  FHEYDGGGRGRVQRKHTESNNSLRNLFNRVSSRRFN

XP_038894267.1 uncharacterized protein LOC120082919 [Benincasa hispida]8.27e-6781.88Show/hide
Query:  MKKKPEVEDD--HRHLEILKAVAQAWHSHTGSSKPANEFDAHRRNCRGTPSRFKLEAIRTRSSAGDRSGGPRWDFSQSLWDSYEIVTVSKKLEAGLVLDG
        MKKKPE++DD  HRHLEILKAVAQAWHSHTGSSKPA+EFDAHRRN R TPSRFKLEAIRTRSS  DR    RWDF QSLWDSYEIVTVSKKLEAGLVLD 
Subjt:  MKKKPEVEDD--HRHLEILKAVAQAWHSHTGSSKPANEFDAHRRNCRGTPSRFKLEAIRTRSSAGDRSGGPRWDFSQSLWDSYEIVTVSKKLEAGLVLDG

Query:  DVFHEYDGGGRGRVQRKHTESNNSLRNLFNRVSSRRFN
        D F E DGGG GR QRK  ES NSLRNLF+R SSRRFN
Subjt:  DVFHEYDGGGRGRVQRKHTESNNSLRNLFNRVSSRRFN

TrEMBL top hitse value%identityAlignment
A0A0A0LTM3 Uncharacterized protein7.54e-6175.71Show/hide
Query:  MKKKPEVE---DDHRHLEILKAVAQAWHSHTGSSKPANEFDAHRRNCRGTPSRFKLEAIRTRSSA-GDRSGGPRWDFSQSLWDSYEIVTVSKKLEAGLVL
        MKKKP++    DD RHLEILKAVAQAWHSHTG+SKPA+EFDAHRRN R  PSRFK+EAIR+R+S   DR    RWDF+QSLWDSYEIVTVSKKLEAGLVL
Subjt:  MKKKPEVE---DDHRHLEILKAVAQAWHSHTGSSKPANEFDAHRRNCRGTPSRFKLEAIRTRSSA-GDRSGGPRWDFSQSLWDSYEIVTVSKKLEAGLVL

Query:  DGDVFHEYDGGGRGRVQRKHTESNNSLRNLFNRVSSRRFN
        DGD F E + GG GR QRK  ES NSLRNLFNR SSRRFN
Subjt:  DGDVFHEYDGGGRGRVQRKHTESNNSLRNLFNRVSSRRFN

A0A1S3AX17 uncharacterized protein LOC1034838296.19e-6074.1Show/hide
Query:  MKKKPEVEDDH---RHLEILKAVAQAWHSHTGSSKPANEFDAHRRNCRGTPSRFKLEAIRTRSSAGDRSGGPRWDFSQSLWDSYEIVTVSKKLEAGLVLD
        MKKKP++   H   RHLEILKAVAQAWH+HTG+SKPA+EFDAHRRN R TPSRFKLEAIR+R+++       RWDF+QSLWDSYEIVTVSKKLEAGLVLD
Subjt:  MKKKPEVEDDH---RHLEILKAVAQAWHSHTGSSKPANEFDAHRRNCRGTPSRFKLEAIRTRSSAGDRSGGPRWDFSQSLWDSYEIVTVSKKLEAGLVLD

Query:  GDVFHEYDGGGRGRVQRKHTESNNSLRNLFNRVSSRRFN
        GD F E + GG GR QRK  ES NSLRNLFNR SSRRFN
Subjt:  GDVFHEYDGGGRGRVQRKHTESNNSLRNLFNRVSSRRFN

A0A5A7UNW1 Uncharacterized protein6.19e-6074.1Show/hide
Query:  MKKKPEVEDDH---RHLEILKAVAQAWHSHTGSSKPANEFDAHRRNCRGTPSRFKLEAIRTRSSAGDRSGGPRWDFSQSLWDSYEIVTVSKKLEAGLVLD
        MKKKP++   H   RHLEILKAVAQAWH+HTG+SKPA+EFDAHRRN R TPSRFKLEAIR+R+++       RWDF+QSLWDSYEIVTVSKKLEAGLVLD
Subjt:  MKKKPEVEDDH---RHLEILKAVAQAWHSHTGSSKPANEFDAHRRNCRGTPSRFKLEAIRTRSSAGDRSGGPRWDFSQSLWDSYEIVTVSKKLEAGLVLD

Query:  GDVFHEYDGGGRGRVQRKHTESNNSLRNLFNRVSSRRFN
        GD F E + GG GR QRK  ES NSLRNLFNR SSRRFN
Subjt:  GDVFHEYDGGGRGRVQRKHTESNNSLRNLFNRVSSRRFN

A0A6J1C5Z6 uncharacterized protein LOC1110087161.08e-94100Show/hide
Query:  MKKKPEVEDDHRHLEILKAVAQAWHSHTGSSKPANEFDAHRRNCRGTPSRFKLEAIRTRSSAGDRSGGPRWDFSQSLWDSYEIVTVSKKLEAGLVLDGDV
        MKKKPEVEDDHRHLEILKAVAQAWHSHTGSSKPANEFDAHRRNCRGTPSRFKLEAIRTRSSAGDRSGGPRWDFSQSLWDSYEIVTVSKKLEAGLVLDGDV
Subjt:  MKKKPEVEDDHRHLEILKAVAQAWHSHTGSSKPANEFDAHRRNCRGTPSRFKLEAIRTRSSAGDRSGGPRWDFSQSLWDSYEIVTVSKKLEAGLVLDGDV

Query:  FHEYDGGGRGRVQRKHTESNNSLRNLFNRVSSRRFN
        FHEYDGGGRGRVQRKHTESNNSLRNLFNRVSSRRFN
Subjt:  FHEYDGGGRGRVQRKHTESNNSLRNLFNRVSSRRFN

A0A6J1E7J5 uncharacterized protein LOC1114313501.86e-6077.21Show/hide
Query:  MKKKPEVEDDHRHLEILKAVAQAWHSHTGSSKPANEFDAHRRNCRGTPSRFKLEAIRTRSSAGDRSGGPRWDFSQSLWDSYEIVTVSKKLEAGLVLDGDV
        MK KP VED+  HLEILKAVAQAW SHTG+SKPA+EFDAHRRNCR  PSRFKLEAIR+RSS G   G  RWDF QSLWDSYEIV VSKKLE GLVLDGD 
Subjt:  MKKKPEVEDDHRHLEILKAVAQAWHSHTGSSKPANEFDAHRRNCRGTPSRFKLEAIRTRSSAGDRSGGPRWDFSQSLWDSYEIVTVSKKLEAGLVLDGDV

Query:  FHEYDGGGRGRVQRKHTESNNSLRNLFNRVSSRRFN
        F E DGGGR   QRK  ES NSLRNLFNR S RRFN
Subjt:  FHEYDGGGRGRVQRKHTESNNSLRNLFNRVSSRRFN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G24700.1 unknown protein2.2e-2244.9Show/hide
Query:  MKKKPEVEDDH--------RHLEILKAVAQAWHSHTGSSK-PANEFDAHRRNC--RGTPSRFKLEAIRTRSSAGDRSGGPRWDFSQSLWDSYEIVTVSKK
        M+KK E +D++        + LE++KA AQAW SH+ +SK    EFDA R++   +G  SRFK EA+    SA        W+F QSLWD YEI++VSKK
Subjt:  MKKKPEVEDDH--------RHLEILKAVAQAWHSHTGSSK-PANEFDAHRRNC--RGTPSRFKLEAIRTRSSAGDRSGGPRWDFSQSLWDSYEIVTVSKK

Query:  LEAGLVLDGDVFHEYDGGGRGRVQRKHT-ESNNSLRNLFNRVSSRRF
        LE  L L+   F   D  G  ++++K T +S NSLR+LF R SS+RF
Subjt:  LEAGLVLDGDVFHEYDGGGRGRVQRKHT-ESNNSLRNLFNRVSSRRF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAGAAACCAGAGGTTGAAGACGACCACCGTCATCTCGAAATCCTCAAGGCGGTGGCGCAGGCCTGGCACAGCCACACCGGCAGTTCAAAGCCCGCTAATGAATT
CGACGCCCACCGCCGGAATTGCAGAGGCACCCCCTCCCGCTTCAAGCTGGAGGCGATAAGAACCAGGTCCTCCGCCGGCGACCGGAGCGGCGGCCCGAGATGGGACTTCA
GCCAATCGCTGTGGGACTCGTATGAGATTGTGACGGTGTCGAAGAAGCTGGAGGCGGGGCTGGTTCTCGACGGCGACGTGTTTCATGAATACGACGGCGGCGGGCGAGGG
AGAGTCCAGCGGAAACACACAGAGAGTAACAATAGTCTCAGAAACTTGTTCAACAGGGTTTCTTCGAGGAGGTTCAAC
mRNA sequenceShow/hide mRNA sequence
ATGAAGAAGAAACCAGAGGTTGAAGACGACCACCGTCATCTCGAAATCCTCAAGGCGGTGGCGCAGGCCTGGCACAGCCACACCGGCAGTTCAAAGCCCGCTAATGAATT
CGACGCCCACCGCCGGAATTGCAGAGGCACCCCCTCCCGCTTCAAGCTGGAGGCGATAAGAACCAGGTCCTCCGCCGGCGACCGGAGCGGCGGCCCGAGATGGGACTTCA
GCCAATCGCTGTGGGACTCGTATGAGATTGTGACGGTGTCGAAGAAGCTGGAGGCGGGGCTGGTTCTCGACGGCGACGTGTTTCATGAATACGACGGCGGCGGGCGAGGG
AGAGTCCAGCGGAAACACACAGAGAGTAACAATAGTCTCAGAAACTTGTTCAACAGGGTTTCTTCGAGGAGGTTCAAC
Protein sequenceShow/hide protein sequence
MKKKPEVEDDHRHLEILKAVAQAWHSHTGSSKPANEFDAHRRNCRGTPSRFKLEAIRTRSSAGDRSGGPRWDFSQSLWDSYEIVTVSKKLEAGLVLDGDVFHEYDGGGRG
RVQRKHTESNNSLRNLFNRVSSRRFN