; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC03g1060 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC03g1060
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionGibberellin-regulated protein 2
Genome locationMC03:16943540..16943725
RNA-Seq ExpressionMC03g1060
SyntenyMC03g1060
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR003854 - Gibberellin regulated protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055209.1 snakin-2-like isoform X1 [Cucumis melo var. makuwa]8.71e-3785.48Show/hide
Query:  VDCGGSCKRRCGAHSRPKLCIRACGTCCARCRCVPPGTSGNREVCGRCYTGMTTHHNKTKCP
        +DCGG CKRRCGAHSRP  CIRACGTCC RCRCVPPGTSGNRE+CG CYT MTTH NKTKCP
Subjt:  VDCGGSCKRRCGAHSRPKLCIRACGTCCARCRCVPPGTSGNREVCGRCYTGMTTHHNKTKCP

XP_008438094.1 PREDICTED: snakin-2-like isoform X1 [Cucumis melo]3.04e-3685.48Show/hide
Query:  VDCGGSCKRRCGAHSRPKLCIRACGTCCARCRCVPPGTSGNREVCGRCYTGMTTHHNKTKCP
        +DCGG CKRRCGAHSRP  CIRACGTCC RCRCVPPGTSGNRE+CG CYT MTTH NKTKCP
Subjt:  VDCGGSCKRRCGAHSRPKLCIRACGTCCARCRCVPPGTSGNREVCGRCYTGMTTHHNKTKCP

XP_008438104.1 PREDICTED: snakin-2-like isoform X2 [Cucumis melo]2.39e-3685.48Show/hide
Query:  VDCGGSCKRRCGAHSRPKLCIRACGTCCARCRCVPPGTSGNREVCGRCYTGMTTHHNKTKCP
        +DCGG CKRRCGAHSRP  CIRACGTCC RCRCVPPGTSGNRE+CG CYT MTTH NKTKCP
Subjt:  VDCGGSCKRRCGAHSRPKLCIRACGTCCARCRCVPPGTSGNREVCGRCYTGMTTHHNKTKCP

XP_014508093.1 snakin-2 [Vigna radiata var. radiata]1.64e-3583.87Show/hide
Query:  VDCGGSCKRRCGAHSRPKLCIRACGTCCARCRCVPPGTSGNREVCGRCYTGMTTHHNKTKCP
        +DCGG CKRRCGAHSRP LC RACGTCC RC+CVPPGTSGNRE+CG CYT MTTH NKTKCP
Subjt:  VDCGGSCKRRCGAHSRPKLCIRACGTCCARCRCVPPGTSGNREVCGRCYTGMTTHHNKTKCP

XP_022137473.1 snakin-2-like [Momordica charantia]2.29e-4398.39Show/hide
Query:  VDCGGSCKRRCGAHSRPKLCIRACGTCCARCRCVPPGTSGNREVCGRCYTGMTTHHNKTKCP
        +DCGGSCKRRCGAHSRPKLCIRACGTCCARCRCVPPGTSGNREVCGRCYTGMTTHHNKTKCP
Subjt:  VDCGGSCKRRCGAHSRPKLCIRACGTCCARCRCVPPGTSGNREVCGRCYTGMTTHHNKTKCP

TrEMBL top hitse value%identityAlignment
A0A1S3AVJ9 snakin-2-like isoform X21.16e-3685.48Show/hide
Query:  VDCGGSCKRRCGAHSRPKLCIRACGTCCARCRCVPPGTSGNREVCGRCYTGMTTHHNKTKCP
        +DCGG CKRRCGAHSRP  CIRACGTCC RCRCVPPGTSGNRE+CG CYT MTTH NKTKCP
Subjt:  VDCGGSCKRRCGAHSRPKLCIRACGTCCARCRCVPPGTSGNREVCGRCYTGMTTHHNKTKCP

A0A1S3AW57 snakin-2-like isoform X11.47e-3685.48Show/hide
Query:  VDCGGSCKRRCGAHSRPKLCIRACGTCCARCRCVPPGTSGNREVCGRCYTGMTTHHNKTKCP
        +DCGG CKRRCGAHSRP  CIRACGTCC RCRCVPPGTSGNRE+CG CYT MTTH NKTKCP
Subjt:  VDCGGSCKRRCGAHSRPKLCIRACGTCCARCRCVPPGTSGNREVCGRCYTGMTTHHNKTKCP

A0A1S3UPU0 snakin-27.95e-3683.87Show/hide
Query:  VDCGGSCKRRCGAHSRPKLCIRACGTCCARCRCVPPGTSGNREVCGRCYTGMTTHHNKTKCP
        +DCGG CKRRCGAHSRP LC RACGTCC RC+CVPPGTSGNRE+CG CYT MTTH NKTKCP
Subjt:  VDCGGSCKRRCGAHSRPKLCIRACGTCCARCRCVPPGTSGNREVCGRCYTGMTTHHNKTKCP

A0A5A7UP17 Snakin-2-like isoform X14.22e-3785.48Show/hide
Query:  VDCGGSCKRRCGAHSRPKLCIRACGTCCARCRCVPPGTSGNREVCGRCYTGMTTHHNKTKCP
        +DCGG CKRRCGAHSRP  CIRACGTCC RCRCVPPGTSGNRE+CG CYT MTTH NKTKCP
Subjt:  VDCGGSCKRRCGAHSRPKLCIRACGTCCARCRCVPPGTSGNREVCGRCYTGMTTHHNKTKCP

A0A6J1CAF9 snakin-2-like1.11e-4398.39Show/hide
Query:  VDCGGSCKRRCGAHSRPKLCIRACGTCCARCRCVPPGTSGNREVCGRCYTGMTTHHNKTKCP
        +DCGGSCKRRCGAHSRPKLCIRACGTCCARCRCVPPGTSGNREVCGRCYTGMTTHHNKTKCP
Subjt:  VDCGGSCKRRCGAHSRPKLCIRACGTCCARCRCVPPGTSGNREVCGRCYTGMTTHHNKTKCP

SwissProt top hitse value%identityAlignment
P46687 Gibberellin-regulated protein 31.0e-1658.06Show/hide
Query:  VDCGGSCKRRCGAHSRPKLCIRACGTCCARCRCVPPGTSGNREVCGRCYTGMTTHHNKTKCP
        +DCGG CK RC   SRP LC+RAC +CC RC CVPPGT+GN  +C  CY  +TT   + KCP
Subjt:  VDCGGSCKRRCGAHSRPKLCIRACGTCCARCRCVPPGTSGNREVCGRCYTGMTTHHNKTKCP

P46688 Gibberellin-regulated protein 27.2e-1861.29Show/hide
Query:  VDCGGSCKRRCGAHSRPKLCIRACGTCCARCRCVPPGTSGNREVCGRCYTGMTTHHNKTKCP
        +DCGG CK RC   SR KLC+RAC +CC+RC CVPPGTSGN  +C  CY  +TTH  + KCP
Subjt:  VDCGGSCKRRCGAHSRPKLCIRACGTCCARCRCVPPGTSGNREVCGRCYTGMTTHHNKTKCP

Q8GWK5 Gibberellin-regulated protein 92.3e-1659.68Show/hide
Query:  VDCGGSCKRRCGAHSRPKLCIRACGTCCARCRCVPPGTSGNREVCGRCYTGMTTHHNKTKCP
        ++CG +C RRC   SR K+C RACG+CCA+C+CVPPGTSGN   C  CY  + TH NK KCP
Subjt:  VDCGGSCKRRCGAHSRPKLCIRACGTCCARCRCVPPGTSGNREVCGRCYTGMTTHHNKTKCP

Q93X17 Snakin-22.0e-2069.35Show/hide
Query:  VDCGGSCKRRCGAHSRPKLCIRACGTCCARCRCVPPGTSGNREVCGRCYTGMTTHHNKTKCP
        +DCGG+C  RC   SRP+LC RACGTCCARC CVPPGTSGN E C  CY  +TTH NK KCP
Subjt:  VDCGGSCKRRCGAHSRPKLCIRACGTCCARCRCVPPGTSGNREVCGRCYTGMTTHHNKTKCP

Q9LFR3 Gibberellin-regulated protein 142.7e-1759.68Show/hide
Query:  VDCGGSCKRRCGAHSRPKLCIRACGTCCARCRCVPPGTSGNREVCGRCYTGMTTHHNKTKCP
        +DC   C  RCG HSR  +C+RAC TCC RC+CVPPGT GN+E CG CY  M T   K+KCP
Subjt:  VDCGGSCKRRCGAHSRPKLCIRACGTCCARCRCVPPGTSGNREVCGRCYTGMTTHHNKTKCP

Arabidopsis top hitse value%identityAlignment
AT1G22690.1 Gibberellin-regulated family protein1.6e-1759.68Show/hide
Query:  VDCGGSCKRRCGAHSRPKLCIRACGTCCARCRCVPPGTSGNREVCGRCYTGMTTHHNKTKCP
        ++CG +C RRC   SR K+C RACG+CCA+C+CVPPGTSGN   C  CY  + TH NK KCP
Subjt:  VDCGGSCKRRCGAHSRPKLCIRACGTCCARCRCVPPGTSGNREVCGRCYTGMTTHHNKTKCP

AT1G22690.2 Gibberellin-regulated family protein1.6e-1759.68Show/hide
Query:  VDCGGSCKRRCGAHSRPKLCIRACGTCCARCRCVPPGTSGNREVCGRCYTGMTTHHNKTKCP
        ++CG +C RRC   SR K+C RACG+CCA+C+CVPPGTSGN   C  CY  + TH NK KCP
Subjt:  VDCGGSCKRRCGAHSRPKLCIRACGTCCARCRCVPPGTSGNREVCGRCYTGMTTHHNKTKCP

AT4G09600.1 GAST1 protein homolog 37.4e-1858.06Show/hide
Query:  VDCGGSCKRRCGAHSRPKLCIRACGTCCARCRCVPPGTSGNREVCGRCYTGMTTHHNKTKCP
        +DCGG CK RC   SRP LC+RAC +CC RC CVPPGT+GN  +C  CY  +TT   + KCP
Subjt:  VDCGGSCKRRCGAHSRPKLCIRACGTCCARCRCVPPGTSGNREVCGRCYTGMTTHHNKTKCP

AT4G09610.1 GAST1 protein homolog 25.1e-1961.29Show/hide
Query:  VDCGGSCKRRCGAHSRPKLCIRACGTCCARCRCVPPGTSGNREVCGRCYTGMTTHHNKTKCP
        +DCGG CK RC   SR KLC+RAC +CC+RC CVPPGTSGN  +C  CY  +TTH  + KCP
Subjt:  VDCGGSCKRRCGAHSRPKLCIRACGTCCARCRCVPPGTSGNREVCGRCYTGMTTHHNKTKCP

AT5G14920.1 Gibberellin-regulated family protein1.9e-1859.68Show/hide
Query:  VDCGGSCKRRCGAHSRPKLCIRACGTCCARCRCVPPGTSGNREVCGRCYTGMTTHHNKTKCP
        +DC   C  RCG HSR  +C+RAC TCC RC+CVPPGT GN+E CG CY  M T   K+KCP
Subjt:  VDCGGSCKRRCGAHSRPKLCIRACGTCCARCRCVPPGTSGNREVCGRCYTGMTTHHNKTKCP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTAGATTGTGGAGGGTCGTGCAAGAGGCGGTGCGGAGCGCACTCGAGGCCGAAGCTGTGCATAAGAGCGTGCGGGACGTGCTGTGCGCGGTGCAGGTGCGTGCCGCCGGG
GACGTCCGGGAACCGTGAGGTGTGCGGCAGATGCTACACCGGCATGACCACCCACCACAACAAGACCAAGTGCCCT
mRNA sequenceShow/hide mRNA sequence
GTAGATTGTGGAGGGTCGTGCAAGAGGCGGTGCGGAGCGCACTCGAGGCCGAAGCTGTGCATAAGAGCGTGCGGGACGTGCTGTGCGCGGTGCAGGTGCGTGCCGCCGGG
GACGTCCGGGAACCGTGAGGTGTGCGGCAGATGCTACACCGGCATGACCACCCACCACAACAAGACCAAGTGCCCT
Protein sequenceShow/hide protein sequence
VDCGGSCKRRCGAHSRPKLCIRACGTCCARCRCVPPGTSGNREVCGRCYTGMTTHHNKTKCP