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MC03g1236 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC03g1236
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionGTPase IMAP family member 1, putative
Genome locationMC03:18357186..18357614
RNA-Seq ExpressionMC03g1236
SyntenyMC03g1236
Gene Ontology termsGO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EOY22193.1 GTPase IMAP family member 1, putative [Theobroma cacao]3.81e-1346.08Show/hide
Query:  AAVTVVE-----AWEEIMVAFCLSSAIAIATVSVQI-EKELPFEFRFLSVALLLCFGCVAFGK-MTKPIFHRVSRILYYGGGFLAVTALFIATAIPYAPY
        AA+TV +     AWE+++VAFCL S++ IAT+  QI    LP  F FLS+A+LL F C+  GK  +   F  ++R+L   GGF  VTA FIA AIP+  +
Subjt:  AAVTVVE-----AWEEIMVAFCLSSAIAIATVSVQI-EKELPFEFRFLSVALLLCFGCVAFGK-MTKPIFHRVSRILYYGGGFLAVTALFIATAIPYAPY

Query:  FQ
         Q
Subjt:  FQ

KAE8652531.1 hypothetical protein Csa_013077, partial [Cucumis sativus]3.79e-2253.93Show/hide
Query:  AVTVVEAWEEIMVAFCLSSAIAIATVSVQIEKELPFEFRFLSVALLLCFGCVAFGKMTKPIFHRVSRILYYGGGFLAVTALFIATAIPY
        A  +VE W+++++ FC+SSAI IATVSV I+ ELP  F+ LS+A+LLCF  V F +M   IF  +S+ILY  GG L  ++ FIATAIPY
Subjt:  AVTVVEAWEEIMVAFCLSSAIAIATVSVQIEKELPFEFRFLSVALLLCFGCVAFGKMTKPIFHRVSRILYYGGGFLAVTALFIATAIPY

KAG6572911.1 hypothetical protein SDJN03_26798, partial [Cucurbita argyrosperma subsp. sororia]2.37e-5469.39Show/hide
Query:  WVGNCIRKVRKCWELYLEDEVEAGGGGGQPA----AAVTVVEAWEEIMVAFCLSSAIAIATVSVQIEKELPFEFRFLSVALLLCFGCVAFGKMTKPIFHR
        W  NCI K R+ WEL  ED VE GGGGG P+    AA  +VE W++++VAFC+SSAIAIATVSVQIEK+LP  F FLS+ LLLCFG VAFGKMTK I  R
Subjt:  WVGNCIRKVRKCWELYLEDEVEAGGGGGQPA----AAVTVVEAWEEIMVAFCLSSAIAIATVSVQIEKELPFEFRFLSVALLLCFGCVAFGKMTKPIFHR

Query:  VSRILYYGGGFLAVTALFIATAIPYAPYFQTIIFLIYLIFWFLFMLI
        VSRILY  GG L VTALFIA+AIPYA YFQ IIFLIYLIFW +FML+
Subjt:  VSRILYYGGGFLAVTALFIATAIPYAPYFQTIIFLIYLIFWFLFMLI

KAG6584385.1 hypothetical protein SDJN03_20317, partial [Cucurbita argyrosperma subsp. sororia]4.59e-2152.5Show/hide
Query:  EAGGGGGQ--PAAAVTVVEAWEEIMVAFCLSSAIAIATVSVQIEKELPFEFRFLSVALLLCFGCVAFGKMTKPIFH-RVSRILYYGGGFLAVTALFIATA
        EAG    Q  P +AV ++  WE +MV FC+ +AIAIATVSVQI+ +L   F+FLS AL+   GC  F    K I H RVS ILY+ GGF  VTA FIA A
Subjt:  EAGGGGGQ--PAAAVTVVEAWEEIMVAFCLSSAIAIATVSVQIEKELPFEFRFLSVALLLCFGCVAFGKMTKPIFH-RVSRILYYGGGFLAVTALFIATA

Query:  IPYAPYFQTIIFLIYLIFWF
        IPYA +FQ +   +YL+F F
Subjt:  IPYAPYFQTIIFLIYLIFWF

OMO67964.1 hypothetical protein CCACVL1_20161 [Corchorus capsularis]1.55e-1447.57Show/hide
Query:  AAVTVVE-----AWEEIMVAFCLSSAIAIATVSVQI-EKELPFEFRFLSVALLLCFGCVAFGKM--TKPIFHRVSRILYYGGGFLAVTALFIATAIPYAP
        AA+TV +     AWE+++VAFCL S+I IA +  QI    LP  F  LS+A+LL F C+  GK       FHRV+R+L   GGF  VTA FIA AIP+  
Subjt:  AAVTVVE-----AWEEIMVAFCLSSAIAIATVSVQI-EKELPFEFRFLSVALLLCFGCVAFGKM--TKPIFHRVSRILYYGGGFLAVTALFIATAIPYAP

Query:  YFQ
        + Q
Subjt:  YFQ

TrEMBL top hitse value%identityAlignment
A0A0A0LCY2 Uncharacterized protein1.82e-2353.47Show/hide
Query:  VVEAWEEIMVAFCLSSAIAIATVSVQIEKELPFEFRFLSVALLLCFGCVAFGKMTKPIFHRVSRILYYGGGFLAVTALFIATAIPYAPYFQTIIFLIYLI
        +VE  +E+++ FCLSSAI IATVSVQ + +LP  F+FLS+A+L+CF  V F +M   IF  +S+ILY  GGFL  T  FIATAIPY  +F  I+ ++Y I
Subjt:  VVEAWEEIMVAFCLSSAIAIATVSVQIEKELPFEFRFLSVALLLCFGCVAFGKMTKPIFHRVSRILYYGGGFLAVTALFIATAIPYAPYFQTIIFLIYLI

Query:  F
        F
Subjt:  F

A0A0A0LQB6 Uncharacterized protein2.37e-4861.74Show/hide
Query:  WVGNCIRKVRKCWELYLEDEVEAGGGGGQPAAAVTVV----EAWEEIMVAFCLSSAIAIATVSVQIE--KELPFEFRFLSVALLLCFGCVAFGKMTKPIF
        WVG+CIRK  + WE  L+ E E+G  GG     +T+V    E W+E++VA C+SSAI IATVSVQIE  K+LP  F+FLS+ +LLCFG V F KMTKPIF
Subjt:  WVGNCIRKVRKCWELYLEDEVEAGGGGGQPAAAVTVV----EAWEEIMVAFCLSSAIAIATVSVQIE--KELPFEFRFLSVALLLCFGCVAFGKMTKPIF

Query:  HRVSRILYYGGGFLAVTALFIATAIPYAPYFQTIIFLIYLIFWFLFMLI
          VS+ILY  GGFL VTA FIATAIP+APYFQ IIF++YL+F F+FMLI
Subjt:  HRVSRILYYGGGFLAVTALFIATAIPYAPYFQTIIFLIYLIFWFLFMLI

A0A0A0LQP5 Uncharacterized protein4.42e-1646.53Show/hide
Query:  VEAWEEIMVAFCLSSAIAIATVSVQIEKELPFEFRFLSVALLLCFGCVAFGKMTKPIFHRVSRILYYGGGFLAVTALFIATAIPYAP-YFQTIIFLIYLI
        VE  +E ++  C+SSAI I T SVQI+ +LP  F+ LS+ +LLCF  V F +M + +F  +S ILY  G F+  T  FIATAI Y   +F TI+ ++Y I
Subjt:  VEAWEEIMVAFCLSSAIAIATVSVQIEKELPFEFRFLSVALLLCFGCVAFGKMTKPIFHRVSRILYYGGGFLAVTALFIATAIPYAP-YFQTIIFLIYLI

Query:  F
        F
Subjt:  F

A0A0A0LSX4 Uncharacterized protein2.92e-2353.68Show/hide
Query:  AVTVVEAWEEIMVAFCLSSAIAIATVSVQIEKELPFEFRFLSVALLLCFGCVAFGKMTKPIFHRVSRILYYGGGFLAVTALFIATAIPYAPYFQT
        A  +VE W+++++ FC+SSAI IATVSV I+ ELP  F+ LS+A+LLCF  V F +M   IF  +S+ILY  GG L  ++ FIATAIPYA  F T
Subjt:  AVTVVEAWEEIMVAFCLSSAIAIATVSVQIEKELPFEFRFLSVALLLCFGCVAFGKMTKPIFHRVSRILYYGGGFLAVTALFIATAIPYAPYFQT

A0A1R3HC75 Uncharacterized protein7.50e-1547.57Show/hide
Query:  AAVTVVE-----AWEEIMVAFCLSSAIAIATVSVQI-EKELPFEFRFLSVALLLCFGCVAFGKM--TKPIFHRVSRILYYGGGFLAVTALFIATAIPYAP
        AA+TV +     AWE+++VAFCL S+I IA +  QI    LP  F  LS+A+LL F C+  GK       FHRV+R+L   GGF  VTA FIA AIP+  
Subjt:  AAVTVVE-----AWEEIMVAFCLSSAIAIATVSVQI-EKELPFEFRFLSVALLLCFGCVAFGKM--TKPIFHRVSRILYYGGGFLAVTALFIATAIPYAP

Query:  YFQ
        + Q
Subjt:  YFQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TGGGTTGGGAATTGCATCAGAAAAGTACGCAAGTGTTGGGAATTATATTTAGAGGATGAAGTAGAAGCTGGGGGCGGCGGGGGGCAACCGGCGGCGGCGGTGACGGTAGT
GGAGGCGTGGGAGGAGATAATGGTAGCGTTTTGCCTGTCGTCGGCCATAGCCATAGCCACAGTTTCAGTTCAGATAGAAAAAGAGCTACCTTTTGAGTTTCGGTTTCTAT
CGGTTGCCCTGTTGCTGTGTTTTGGATGCGTGGCGTTTGGGAAGATGACAAAGCCCATATTCCATAGAGTTTCGCGAATATTGTATTATGGTGGCGGGTTTTTGGCAGTC
ACGGCGTTGTTCATAGCCACAGCAATTCCATATGCACCATATTTTCAGACCATAATCTTCCTCATTTACTTAATCTTCTGGTTCCTTTTCATGCTCATC
mRNA sequenceShow/hide mRNA sequence
TGGGTTGGGAATTGCATCAGAAAAGTACGCAAGTGTTGGGAATTATATTTAGAGGATGAAGTAGAAGCTGGGGGCGGCGGGGGGCAACCGGCGGCGGCGGTGACGGTAGT
GGAGGCGTGGGAGGAGATAATGGTAGCGTTTTGCCTGTCGTCGGCCATAGCCATAGCCACAGTTTCAGTTCAGATAGAAAAAGAGCTACCTTTTGAGTTTCGGTTTCTAT
CGGTTGCCCTGTTGCTGTGTTTTGGATGCGTGGCGTTTGGGAAGATGACAAAGCCCATATTCCATAGAGTTTCGCGAATATTGTATTATGGTGGCGGGTTTTTGGCAGTC
ACGGCGTTGTTCATAGCCACAGCAATTCCATATGCACCATATTTTCAGACCATAATCTTCCTCATTTACTTAATCTTCTGGTTCCTTTTCATGCTCATC
Protein sequenceShow/hide protein sequence
WVGNCIRKVRKCWELYLEDEVEAGGGGGQPAAAVTVVEAWEEIMVAFCLSSAIAIATVSVQIEKELPFEFRFLSVALLLCFGCVAFGKMTKPIFHRVSRILYYGGGFLAV
TALFIATAIPYAPYFQTIIFLIYLIFWFLFMLI