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MC03g_new0077 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC03g_new0077
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionCysteine desulfurase mitochondrial-like
Genome locationMC03:3731229..3738139
RNA-Seq ExpressionMC03g_new0077
SyntenyMC03g_new0077
Gene Ontology termsGO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR025558 - Domain of unknown function DUF4283


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]1.84e-4048.51Show/hide
Query:  MSIVDLLEEWKNLKFTLEEEEIAIDVDTSTYVESGSKVELLLVGKLFLKRSIACIAMKNTMRNAWKLDDNTFDVETIGKNLFLFIFVRVVDRNKVYKMGP
        M+  +LLEEWKN K T EE++IA+D+D+S    +G  +EL L+ KL  KRSI+C  +KNT++ AWKLD   F V+ IG N+FLF F R  DRN++ +MGP
Subjt:  MSIVDLLEEWKNLKFTLEEEEIAIDVDTSTYVESGSKVELLLVGKLFLKRSIACIAMKNTMRNAWKLDDNTFDVETIGKNLFLFIFVRVVDRNKVYKMGP

Query:  WTFDKAVVVLIKPPALIRPSELDFTRLPIWIRFF
        WTFD+A++++  P +L +P ++DF  + +W+ FF
Subjt:  WTFDKAVVVLIKPPALIRPSELDFTRLPIWIRFF

XP_022155933.1 uncharacterized protein LOC111022932 [Momordica charantia]1.36e-1731.25Show/hide
Query:  DLLEEWKNLKFTLEEEEIAIDVDTSTYVESGSKVELLLVGKLFLKRSIACIAMKNTMRNAWKLDDNTFDVETIGKNLFLFIFVRVVDRNKVYKMGPWTFD
        ++ E W+N   T E+EE  I +D+   + +   V+   VGKL   + I+  A ++ M++ WK+ ++T  +ET G NL++ +F  + ++N+V   GPW+F+
Subjt:  DLLEEWKNLKFTLEEEEIAIDVDTSTYVESGSKVELLLVGKLFLKRSIACIAMKNTMRNAWKLDDNTFDVETIGKNLFLFIFVRVVDRNKVYKMGPWTFD

Query:  KAVVVLIKPPALIRPSELDFTRLPIWIR
         +++VL  P A  +P +++F    +WI+
Subjt:  KAVVVLIKPPALIRPSELDFTRLPIWIR

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]1.01e-2545.38Show/hide
Query:  DLLEEWKNLKFTLEEEEIAIDVDTSTYVESGSKVELLLVGKLFLKRSIACIAMKNTMRNAWKLDDNTFDVETIGKNLFLFIFVRVVDRNKVYKMGPWTFD
        +LL +W+  K T EE+EIA+DVD      +   +   LVGKL  KR I+   +   +  AWK++ +   VE+IGKNLFLF F R  D N+V K GPW FD
Subjt:  DLLEEWKNLKFTLEEEEIAIDVDTSTYVESGSKVELLLVGKLFLKRSIACIAMKNTMRNAWKLDDNTFDVETIGKNLFLFIFVRVVDRNKVYKMGPWTFD

Query:  KAVVVLIKPPALIRPSELDFTRLPIWIRFF
        KA++VL KP +    SEL+F R+  WI  F
Subjt:  KAVVVLIKPPALIRPSELDFTRLPIWIRFF

XP_022158119.1 uncharacterized protein LOC111024676, partial [Momordica charantia]1.52e-1933.59Show/hide
Query:  DLLEEWKNLKFTLEEEEIAIDVDTSTYVESGSKVELLLVGKLFLKRSIACIAMKNTMRNAWKLDDNTFDVETIGKNLFLFIFVRVVDRNKVYKMGPWTFD
        ++ E W+N   T EEEE  I VD    + +   ++L  VGKL   + I+  A+ + M+  WK+ ++T  +E  G N+++  F  +V++ +V   GPWTFD
Subjt:  DLLEEWKNLKFTLEEEEIAIDVDTSTYVESGSKVELLLVGKLFLKRSIACIAMKNTMRNAWKLDDNTFDVETIGKNLFLFIFVRVVDRNKVYKMGPWTFD

Query:  KAVVVLIKPPALIRPSELDFTRLPIWIR
        K++ VL+ P A  +P ++DF     W++
Subjt:  KAVVVLIKPPALIRPSELDFTRLPIWIR

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]4.09e-5264.93Show/hide
Query:  MSIVDLLEEWKNLKFTLEEEEIAIDVDTSTYVESGSKVELLLVGKLFLKRSIACIAMKNTMRNAWKLDDNTFDVETIGKNLFLFIFVRVVDRNKVYKMGP
        M+  DLLEEWKN K T EEEE AIDVD S    +GS++E +LVGKLF+KR I C  MKNTMR AWKL++N F+V+++G NLFLF F R +DRNK+YK GP
Subjt:  MSIVDLLEEWKNLKFTLEEEEIAIDVDTSTYVESGSKVELLLVGKLFLKRSIACIAMKNTMRNAWKLDDNTFDVETIGKNLFLFIFVRVVDRNKVYKMGP

Query:  WTFDKAVVVLIKPPALIRPSELDFTRLPIWIRFF
        WTFD+ +V++ KP ALI PSELDFT+LPIW+RFF
Subjt:  WTFDKAVVVLIKPPALIRPSELDFTRLPIWIRFF

TrEMBL top hitse value%identityAlignment
A0A6J1BSZ1 uncharacterized protein LOC1110054818.93e-4148.51Show/hide
Query:  MSIVDLLEEWKNLKFTLEEEEIAIDVDTSTYVESGSKVELLLVGKLFLKRSIACIAMKNTMRNAWKLDDNTFDVETIGKNLFLFIFVRVVDRNKVYKMGP
        M+  +LLEEWKN K T EE++IA+D+D+S    +G  +EL L+ KL  KRSI+C  +KNT++ AWKLD   F V+ IG N+FLF F R  DRN++ +MGP
Subjt:  MSIVDLLEEWKNLKFTLEEEEIAIDVDTSTYVESGSKVELLLVGKLFLKRSIACIAMKNTMRNAWKLDDNTFDVETIGKNLFLFIFVRVVDRNKVYKMGP

Query:  WTFDKAVVVLIKPPALIRPSELDFTRLPIWIRFF
        WTFD+A++++  P +L +P ++DF  + +W+ FF
Subjt:  WTFDKAVVVLIKPPALIRPSELDFTRLPIWIRFF

A0A6J1DU55 uncharacterized protein LOC1110231354.88e-2645.38Show/hide
Query:  DLLEEWKNLKFTLEEEEIAIDVDTSTYVESGSKVELLLVGKLFLKRSIACIAMKNTMRNAWKLDDNTFDVETIGKNLFLFIFVRVVDRNKVYKMGPWTFD
        +LL +W+  K T EE+EIA+DVD      +   +   LVGKL  KR I+   +   +  AWK++ +   VE+IGKNLFLF F R  D N+V K GPW FD
Subjt:  DLLEEWKNLKFTLEEEEIAIDVDTSTYVESGSKVELLLVGKLFLKRSIACIAMKNTMRNAWKLDDNTFDVETIGKNLFLFIFVRVVDRNKVYKMGPWTFD

Query:  KAVVVLIKPPALIRPSELDFTRLPIWIRFF
        KA++VL KP +    SEL+F R+  WI  F
Subjt:  KAVVVLIKPPALIRPSELDFTRLPIWIRFF

A0A6J1DX30 uncharacterized protein LOC1110248741.98e-5264.93Show/hide
Query:  MSIVDLLEEWKNLKFTLEEEEIAIDVDTSTYVESGSKVELLLVGKLFLKRSIACIAMKNTMRNAWKLDDNTFDVETIGKNLFLFIFVRVVDRNKVYKMGP
        M+  DLLEEWKN K T EEEE AIDVD S    +GS++E +LVGKLF+KR I C  MKNTMR AWKL++N F+V+++G NLFLF F R +DRNK+YK GP
Subjt:  MSIVDLLEEWKNLKFTLEEEEIAIDVDTSTYVESGSKVELLLVGKLFLKRSIACIAMKNTMRNAWKLDDNTFDVETIGKNLFLFIFVRVVDRNKVYKMGP

Query:  WTFDKAVVVLIKPPALIRPSELDFTRLPIWIRFF
        WTFD+ +V++ KP ALI PSELDFT+LPIW+RFF
Subjt:  WTFDKAVVVLIKPPALIRPSELDFTRLPIWIRFF

A0A6J1DYG3 uncharacterized protein LOC1110246767.37e-2033.59Show/hide
Query:  DLLEEWKNLKFTLEEEEIAIDVDTSTYVESGSKVELLLVGKLFLKRSIACIAMKNTMRNAWKLDDNTFDVETIGKNLFLFIFVRVVDRNKVYKMGPWTFD
        ++ E W+N   T EEEE  I VD    + +   ++L  VGKL   + I+  A+ + M+  WK+ ++T  +E  G N+++  F  +V++ +V   GPWTFD
Subjt:  DLLEEWKNLKFTLEEEEIAIDVDTSTYVESGSKVELLLVGKLFLKRSIACIAMKNTMRNAWKLDDNTFDVETIGKNLFLFIFVRVVDRNKVYKMGPWTFD

Query:  KAVVVLIKPPALIRPSELDFTRLPIWIR
        K++ VL+ P A  +P ++DF     W++
Subjt:  KAVVVLIKPPALIRPSELDFTRLPIWIR

A0A803MW53 Uncharacterized protein4.03e-1939.06Show/hide
Query:  LLEEWKNLKFTLEEEEIAIDVDTSTYVE-SGSKVELLLVGKLFLKRSIACIAMKNTMRNAWKLDDNTFDVETIGKNLFLFIFVRVVDRNKVYKMGPWTFD
        L+++W+ LK T EE  I    D S   E S +K+ L LVGKL  K+S    AMK  ++  W++DDN   +  +  N+F+F F  + DR KV +  PW FD
Subjt:  LLEEWKNLKFTLEEEEIAIDVDTSTYVE-SGSKVELLLVGKLFLKRSIACIAMKNTMRNAWKLDDNTFDVETIGKNLFLFIFVRVVDRNKVYKMGPWTFD

Query:  KAVVVLIKPPALIRPSELDFTRLPIWIR
          +++L +  A  +PSE+ F   P WIR
Subjt:  KAVVVLIKPPALIRPSELDFTRLPIWIR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGTTATCTCTGTATTTGACAGTTCCACCAGAATTCCCAAGGTTCTGATATGTTCCCCATCTTTTCCTTCCTCTACAATGTCAATAGTAGACTTACTAGAGGAGTG
GAAAAATCTCAAATTTACATTAGAGGAGGAGGAGATTGCTATTGATGTGGATACCTCAACCTATGTTGAATCTGGATCCAAAGTTGAGCTTCTTCTGGTAGGTAAACTCT
TCCTCAAACGTTCCATCGCCTGTATTGCTATGAAAAATACAATGAGAAATGCTTGGAAACTGGATGATAATACTTTTGATGTGGAAACTATAGGCAAAAACCTGTTTCTT
TTCATATTTGTTCGTGTGGTGGACAGAAATAAGGTTTACAAAATGGGTCCATGGACCTTTGATAAGGCAGTGGTGGTACTTATTAAACCACCAGCTTTAATCCGTCCATC
GGAGCTGGATTTCACAAGGCTGCCCATCTGGATTCGTTTTTTTATCTGCCTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGAGTTATCTCTGTATTTGACAGTTCCACCAGAATTCCCAAGGTTCTGATATGTTCCCCATCTTTTCCTTCCTCTACAATGTCAATAGTAGACTTACTAGAGGAGTG
GAAAAATCTCAAATTTACATTAGAGGAGGAGGAGATTGCTATTGATGTGGATACCTCAACCTATGTTGAATCTGGATCCAAAGTTGAGCTTCTTCTGGTAGGTAAACTCT
TCCTCAAACGTTCCATCGCCTGTATTGCTATGAAAAATACAATGAGAAATGCTTGGAAACTGGATGATAATACTTTTGATGTGGAAACTATAGGCAAAAACCTGTTTCTT
TTCATATTTGTTCGTGTGGTGGACAGAAATAAGGTTTACAAAATGGGTCCATGGACCTTTGATAAGGCAGTGGTGGTACTTATTAAACCACCAGCTTTAATCCGTCCATC
GGAGCTGGATTTCACAAGGCTGCCCATCTGGATTCGTTTTTTTATCTGCCTCTAG
Protein sequenceShow/hide protein sequence
MRVISVFDSSTRIPKVLICSPSFPSSTMSIVDLLEEWKNLKFTLEEEEIAIDVDTSTYVESGSKVELLLVGKLFLKRSIACIAMKNTMRNAWKLDDNTFDVETIGKNLFL
FIFVRVVDRNKVYKMGPWTFDKAVVVLIKPPALIRPSELDFTRLPIWIRFFICL