; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC04g0003 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC04g0003
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionGYF domain-containing protein
Genome locationMC04:34260..34511
RNA-Seq ExpressionMC04g0003
SyntenyMC04g0003
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR003169 - GYF domain
IPR035445 - GYF-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYJ96718.1 putative protein binding protein [Cucumis melo var. makuwa]2.20e-4583.33Show/hide
Query:  ESGVINLSDDDEQPRFEEHDWGIKLRSLIWYYLDPQGDVQGPFSLASLKNWKDADYFPSDFKVWKTGQNQDEAVLLSDILSPFF
        ES VI+LSDDDE PR EEHDW  +L+SLIW+YLDPQGDVQGPF LASLKNWKDA+YFPSDFKVWKTGQ QD+AVLL+DILSPFF
Subjt:  ESGVINLSDDDEQPRFEEHDWGIKLRSLIWYYLDPQGDVQGPFSLASLKNWKDADYFPSDFKVWKTGQNQDEAVLLSDILSPFF

XP_022148062.1 uncharacterized protein At5g08430 isoform X1 [Momordica charantia]4.39e-53100Show/hide
Query:  ESGVINLSDDDEQPRFEEHDWGIKLRSLIWYYLDPQGDVQGPFSLASLKNWKDADYFPSDFKVWKTGQNQDEAVLLSDILSPFF
        ESGVINLSDDDEQPRFEEHDWGIKLRSLIWYYLDPQGDVQGPFSLASLKNWKDADYFPSDFKVWKTGQNQDEAVLLSDILSPFF
Subjt:  ESGVINLSDDDEQPRFEEHDWGIKLRSLIWYYLDPQGDVQGPFSLASLKNWKDADYFPSDFKVWKTGQNQDEAVLLSDILSPFF

XP_022148063.1 uncharacterized protein At5g08430 isoform X2 [Momordica charantia]3.25e-53100Show/hide
Query:  ESGVINLSDDDEQPRFEEHDWGIKLRSLIWYYLDPQGDVQGPFSLASLKNWKDADYFPSDFKVWKTGQNQDEAVLLSDILSPFF
        ESGVINLSDDDEQPRFEEHDWGIKLRSLIWYYLDPQGDVQGPFSLASLKNWKDADYFPSDFKVWKTGQNQDEAVLLSDILSPFF
Subjt:  ESGVINLSDDDEQPRFEEHDWGIKLRSLIWYYLDPQGDVQGPFSLASLKNWKDADYFPSDFKVWKTGQNQDEAVLLSDILSPFF

XP_022148064.1 uncharacterized protein At5g08430 isoform X3 [Momordica charantia]1.50e-53100Show/hide
Query:  ESGVINLSDDDEQPRFEEHDWGIKLRSLIWYYLDPQGDVQGPFSLASLKNWKDADYFPSDFKVWKTGQNQDEAVLLSDILSPFF
        ESGVINLSDDDEQPRFEEHDWGIKLRSLIWYYLDPQGDVQGPFSLASLKNWKDADYFPSDFKVWKTGQNQDEAVLLSDILSPFF
Subjt:  ESGVINLSDDDEQPRFEEHDWGIKLRSLIWYYLDPQGDVQGPFSLASLKNWKDADYFPSDFKVWKTGQNQDEAVLLSDILSPFF

XP_022148065.1 uncharacterized protein At5g08430 isoform X4 [Momordica charantia]5.86e-54100Show/hide
Query:  ESGVINLSDDDEQPRFEEHDWGIKLRSLIWYYLDPQGDVQGPFSLASLKNWKDADYFPSDFKVWKTGQNQDEAVLLSDILSPFF
        ESGVINLSDDDEQPRFEEHDWGIKLRSLIWYYLDPQGDVQGPFSLASLKNWKDADYFPSDFKVWKTGQNQDEAVLLSDILSPFF
Subjt:  ESGVINLSDDDEQPRFEEHDWGIKLRSLIWYYLDPQGDVQGPFSLASLKNWKDADYFPSDFKVWKTGQNQDEAVLLSDILSPFF

TrEMBL top hitse value%identityAlignment
A0A0A0K932 GYF domain-containing protein3.89e-4684.52Show/hide
Query:  ESGVINLSDDDEQPRFEEHDWGIKLRSLIWYYLDPQGDVQGPFSLASLKNWKDADYFPSDFKVWKTGQNQDEAVLLSDILSPFF
        ES VI+LSDDDE PR EEHDW  KL+SLIWYYLDPQGDVQGPF LASLKNWKDA+YFPSDFKVW+TGQ QD+AVLL+DILSPFF
Subjt:  ESGVINLSDDDEQPRFEEHDWGIKLRSLIWYYLDPQGDVQGPFSLASLKNWKDADYFPSDFKVWKTGQNQDEAVLLSDILSPFF

A0A6J1D1W3 uncharacterized protein At5g08430 isoform X42.84e-54100Show/hide
Query:  ESGVINLSDDDEQPRFEEHDWGIKLRSLIWYYLDPQGDVQGPFSLASLKNWKDADYFPSDFKVWKTGQNQDEAVLLSDILSPFF
        ESGVINLSDDDEQPRFEEHDWGIKLRSLIWYYLDPQGDVQGPFSLASLKNWKDADYFPSDFKVWKTGQNQDEAVLLSDILSPFF
Subjt:  ESGVINLSDDDEQPRFEEHDWGIKLRSLIWYYLDPQGDVQGPFSLASLKNWKDADYFPSDFKVWKTGQNQDEAVLLSDILSPFF

A0A6J1D2W8 uncharacterized protein At5g08430 isoform X37.24e-54100Show/hide
Query:  ESGVINLSDDDEQPRFEEHDWGIKLRSLIWYYLDPQGDVQGPFSLASLKNWKDADYFPSDFKVWKTGQNQDEAVLLSDILSPFF
        ESGVINLSDDDEQPRFEEHDWGIKLRSLIWYYLDPQGDVQGPFSLASLKNWKDADYFPSDFKVWKTGQNQDEAVLLSDILSPFF
Subjt:  ESGVINLSDDDEQPRFEEHDWGIKLRSLIWYYLDPQGDVQGPFSLASLKNWKDADYFPSDFKVWKTGQNQDEAVLLSDILSPFF

A0A6J1D317 uncharacterized protein At5g08430 isoform X21.57e-53100Show/hide
Query:  ESGVINLSDDDEQPRFEEHDWGIKLRSLIWYYLDPQGDVQGPFSLASLKNWKDADYFPSDFKVWKTGQNQDEAVLLSDILSPFF
        ESGVINLSDDDEQPRFEEHDWGIKLRSLIWYYLDPQGDVQGPFSLASLKNWKDADYFPSDFKVWKTGQNQDEAVLLSDILSPFF
Subjt:  ESGVINLSDDDEQPRFEEHDWGIKLRSLIWYYLDPQGDVQGPFSLASLKNWKDADYFPSDFKVWKTGQNQDEAVLLSDILSPFF

A0A6J1D418 uncharacterized protein At5g08430 isoform X12.12e-53100Show/hide
Query:  ESGVINLSDDDEQPRFEEHDWGIKLRSLIWYYLDPQGDVQGPFSLASLKNWKDADYFPSDFKVWKTGQNQDEAVLLSDILSPFF
        ESGVINLSDDDEQPRFEEHDWGIKLRSLIWYYLDPQGDVQGPFSLASLKNWKDADYFPSDFKVWKTGQNQDEAVLLSDILSPFF
Subjt:  ESGVINLSDDDEQPRFEEHDWGIKLRSLIWYYLDPQGDVQGPFSLASLKNWKDADYFPSDFKVWKTGQNQDEAVLLSDILSPFF

SwissProt top hitse value%identityAlignment
Q5U236 GRB10-interacting GYF protein 27.2e-0558.62Show/hide
Query:  WYYLDPQGDVQGPFSLASLKNWKDADYFP
        WYY DPQG++QGPFS   +  W  A YFP
Subjt:  WYYLDPQGDVQGPFSLASLKNWKDADYFP

Q7KQM6 GIGYF family protein Gyf6.1e-0440.48Show/hide
Query:  IWYYLDPQGDVQGPFSLASLKNWKDADYFPSDFKVWKTGQNQ
        +W+Y DPQ +VQGPFS   +  W  A YF  +  V +   N+
Subjt:  IWYYLDPQGDVQGPFSLASLKNWKDADYFPSDFKVWKTGQNQ

Q9FT92 Uncharacterized protein At5g084309.1e-1648.31Show/hide
Query:  SGVINLSDDDE---------QPRFEE-HDWGIKLRSLIWYYLDPQGDVQGPFSLASLKNWKDADYFPSDFKVWKTGQNQDEAVLLSDIL
        S VI LSDDDE          P+ E+          L W Y DPQG VQGPFSL  LK W DA+YF   F+VW TG++ + AVLL+D+L
Subjt:  SGVINLSDDDE---------QPRFEE-HDWGIKLRSLIWYYLDPQGDVQGPFSLASLKNWKDADYFPSDFKVWKTGQNQDEAVLLSDIL

Q9SD34 Zinc finger CCCH domain-containing protein 442.7e-1248.28Show/hide
Query:  SLIWYYLDPQGDVQGPFSLASLKNWKDADYFPSDFKVWKTGQNQDEAVLLSDILSPFF
        S IW+Y DP G  QGPFS+  L+ WK + +FP   ++W+  +NQDE+VLL+D L+  F
Subjt:  SLIWYYLDPQGDVQGPFSLASLKNWKDADYFPSDFKVWKTGQNQDEAVLLSDILSPFF

Q9SIV5 Zinc finger CCCH domain-containing protein 191.4e-1146.43Show/hide
Query:  IWYYLDPQGDVQGPFSLASLKNWKDADYFPSDFKVWKTGQNQDEAVLLSDILSPFF
        IW+Y DP G VQGPFS+A L+ W +  YFP+  ++WK  ++  ++VLL+D L+  F
Subjt:  IWYYLDPQGDVQGPFSLASLKNWKDADYFPSDFKVWKTGQNQDEAVLLSDILSPFF

Arabidopsis top hitse value%identityAlignment
AT2G16485.1 nucleic acid binding;zinc ion binding;DNA binding9.7e-1346.43Show/hide
Query:  IWYYLDPQGDVQGPFSLASLKNWKDADYFPSDFKVWKTGQNQDEAVLLSDILSPFF
        IW+Y DP G VQGPFS+A L+ W +  YFP+  ++WK  ++  ++VLL+D L+  F
Subjt:  IWYYLDPQGDVQGPFSLASLKNWKDADYFPSDFKVWKTGQNQDEAVLLSDILSPFF

AT2G18090.1 PHD finger family protein / SWIB complex BAF60b domain-containing protein / GYF domain-containing protein1.4e-1137.93Show/hide
Query:  SLIWYYLDPQGDVQGPFSLASLKNWKDADYFPSDFKVWKTGQNQDEAVLLSDILSPFF
        +++W Y DP G + GPFSL +L+ W  + +FP + ++W+ G+ Q  ++LL+D L+  F
Subjt:  SLIWYYLDPQGDVQGPFSLASLKNWKDADYFPSDFKVWKTGQNQDEAVLLSDILSPFF

AT3G51120.1 DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding1.9e-1348.28Show/hide
Query:  SLIWYYLDPQGDVQGPFSLASLKNWKDADYFPSDFKVWKTGQNQDEAVLLSDILSPFF
        S IW+Y DP G  QGPFS+  L+ WK + +FP   ++W+  +NQDE+VLL+D L+  F
Subjt:  SLIWYYLDPQGDVQGPFSLASLKNWKDADYFPSDFKVWKTGQNQDEAVLLSDILSPFF

AT5G08430.1 SWIB/MDM2 domain;Plus-3;GYF6.5e-1748.31Show/hide
Query:  SGVINLSDDDE---------QPRFEE-HDWGIKLRSLIWYYLDPQGDVQGPFSLASLKNWKDADYFPSDFKVWKTGQNQDEAVLLSDIL
        S VI LSDDDE          P+ E+          L W Y DPQG VQGPFSL  LK W DA+YF   F+VW TG++ + AVLL+D+L
Subjt:  SGVINLSDDDE---------QPRFEE-HDWGIKLRSLIWYYLDPQGDVQGPFSLASLKNWKDADYFPSDFKVWKTGQNQDEAVLLSDIL

AT5G23480.1 SWIB/MDM2 domain;Plus-3;GYF8.7e-1443.37Show/hide
Query:  VINLSDDDEQPRFEEHDWGIKL---RSLIWYYLDPQGDVQGPFSLASLKNWKDADYFPS--DFKVWKTGQNQDEAVLLSDILS
        +I LSDDD+    +++D   +    + ++W+Y  P+G   GPFSL  LK W D +YF    DFKVWKTG++   AVLL+ +LS
Subjt:  VINLSDDDEQPRFEEHDWGIKL---RSLIWYYLDPQGDVQGPFSLASLKNWKDADYFPS--DFKVWKTGQNQDEAVLLSDILS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAATCTGGAGTGATTAATTTGAGCGATGATGATGAACAACCAAGGTTTGAAGAGCATGATTGGGGTATCAAACTAAGAAGCTTAATTTGGTATTATTTAGATCCCCAGGG
GGACGTACAAGGGCCCTTTTCTCTTGCGTCATTAAAGAATTGGAAGGATGCTGACTATTTTCCTTCAGATTTCAAAGTCTGGAAGACGGGTCAGAATCAAGATGAAGCTG
TTTTATTGAGCGACATTCTTTCCCCCTTCTTT
mRNA sequenceShow/hide mRNA sequence
GAATCTGGAGTGATTAATTTGAGCGATGATGATGAACAACCAAGGTTTGAAGAGCATGATTGGGGTATCAAACTAAGAAGCTTAATTTGGTATTATTTAGATCCCCAGGG
GGACGTACAAGGGCCCTTTTCTCTTGCGTCATTAAAGAATTGGAAGGATGCTGACTATTTTCCTTCAGATTTCAAAGTCTGGAAGACGGGTCAGAATCAAGATGAAGCTG
TTTTATTGAGCGACATTCTTTCCCCCTTCTTT
Protein sequenceShow/hide protein sequence
ESGVINLSDDDEQPRFEEHDWGIKLRSLIWYYLDPQGDVQGPFSLASLKNWKDADYFPSDFKVWKTGQNQDEAVLLSDILSPFF